RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 CEBPZOSA8MTT3 80 aa12.5□□□□□ -0.41
BRCC3-202ENST00000340647 BMI1P35226 326 aa12.5□□□□□ -0.41
BRCC3-202ENST00000340647 DCANP1Q8TF63 244 aa12.5□□□□□ -0.41
BRCC3-202ENST00000340647 KRTAP17-1Q9BYP8 105 aa12.5□□□□□ -0.41
BRCC3-202ENST00000340647 RBKSQ9H477 322 aa12.5□□□□□ -0.41
BRCC3-202ENST00000340647 KCNIP3Q9Y2W7 256 aa12.5□□□□□ -0.41
BRCC3-202ENST00000340647 TRAV2A0A0B4J234 112 aa12.49□□□□□ -0.41
BRCC3-202ENST00000340647 K7EQG2 157 aa12.49□□□□□ -0.41
BRCC3-202ENST00000340647 NOL3O60936 208 aaKnown RBP12.49□□□□□ -0.41
BRCC3-202ENST00000340647 GIG44P09565 113 aaPredicted RBP12.49□□□□□ -0.41
BRCC3-202ENST00000340647 NPPCP23582 126 aa12.49□□□□□ -0.41
BRCC3-202ENST00000340647 NPY1RP25929 384 aa12.49□□□□□ -0.41
BRCC3-202ENST00000340647 CCR6P51684 374 aa12.49□□□□□ -0.41
BRCC3-202ENST00000340647 SMCO1Q147U7 214 aa12.49□□□□□ -0.41
BRCC3-202ENST00000340647 USF2Q15853 346 aaPredicted RBP12.49□□□□□ -0.41
BRCC3-202ENST00000340647 PYDC2Q56P42 97 aa12.49□□□□□ -0.41
BRCC3-202ENST00000340647 LEMD1Q68G75 181 aa12.49□□□□□ -0.41
BRCC3-202ENST00000340647 STPG3Q8N7X2 389 aa12.49□□□□□ -0.41
BRCC3-202ENST00000340647 SCGB3A2Q96PL1 93 aa12.49□□□□□ -0.41
BRCC3-202ENST00000340647 IGKV1D-37A0A075B6S9 117 aa12.48□□□□□ -0.41
BRCC3-202ENST00000340647 OR10J1P30954 320 aa12.48□□□□□ -0.41
BRCC3-202ENST00000340647 P2RY1P47900 373 aa12.48□□□□□ -0.41
BRCC3-202ENST00000340647 DEFB131AP59861 70 aa12.48□□□□□ -0.41
BRCC3-202ENST00000340647 YPEL3P61236 119 aaPredicted RBP12.48□□□□□ -0.41
BRCC3-202ENST00000340647 OR1S2Q8NGQ3 325 aa12.48□□□□□ -0.41
BRCC3-202ENST00000340647 GLMPQ8WWB7 406 aa12.48□□□□□ -0.41
BRCC3-202ENST00000340647 NPIPB3Q92617 1050 aa12.48□□□□□ -0.41
BRCC3-202ENST00000340647 SDHCQ99643 169 aaPredicted RBP12.48□□□□□ -0.41
BRCC3-202ENST00000340647 SRRQ9GZT4 340 aa12.48□□□□□ -0.41
BRCC3-202ENST00000340647 CSTL1Q9H114 145 aa12.48□□□□□ -0.41
BRCC3-202ENST00000340647 TRAV30A0A087WSZ9 112 aa12.47□□□□□ -0.41
BRCC3-202ENST00000340647 CD5P06127 495 aa12.47□□□□□ -0.41
BRCC3-202ENST00000340647 SLC25A4P12235 298 aa12.47□□□□□ -0.41
BRCC3-202ENST00000340647 TMEM128Q5BJH2 165 aa12.47□□□□□ -0.41
BRCC3-202ENST00000340647 C16orf54Q6UWD8 224 aa12.47□□□□□ -0.41
BRCC3-202ENST00000340647 LGI3Q8N145 548 aa12.47□□□□□ -0.41
BRCC3-202ENST00000340647 TOMM5Q8N4H5 51 aa12.47□□□□□ -0.41
BRCC3-202ENST00000340647 LRTM2Q8N967 370 aa12.47□□□□□ -0.41
BRCC3-202ENST00000340647 DTD1Q8TEA8 209 aa12.47□□□□□ -0.41
BRCC3-202ENST00000340647 METTL26Q96S19 204 aa12.47□□□□□ -0.41
BRCC3-202ENST00000340647 RPS10-NUDT3A0A1W2PQS6 291 aa12.46□□□□□ -0.41
BRCC3-202ENST00000340647 CMC4P56277 68 aaPredicted RBP12.46□□□□□ -0.41
BRCC3-202ENST00000340647 BAK1Q16611 211 aa12.46□□□□□ -0.41
BRCC3-202ENST00000340647 TMED4Q7Z7H5 227 aa12.46□□□□□ -0.41
BRCC3-202ENST00000340647 U3KQ87 197 aa12.46□□□□□ -0.41
BRCC3-202ENST00000340647 VPS13DQ5THJ4 4388 aa12.45□□□□□ -0.42
BRCC3-202ENST00000340647 FRAS1Q86XX4 4008 aa12.45□□□□□ -0.42
BRCC3-202ENST00000340647 ZNF701M0R085 212 aaPredicted RBP12.45□□□□□ -0.42
BRCC3-202ENST00000340647 PAFAH1B2P68402 229 aa12.45□□□□□ -0.42
BRCC3-202ENST00000340647 PPP1R1AQ13522 171 aa12.45□□□□□ -0.42
BRCC3-202ENST00000340647 A0A1W2PS18 150 aa12.44□□□□□ -0.42
BRCC3-202ENST00000340647 CCDC160A6NGH7 325 aa12.44□□□□□ -0.42
BRCC3-202ENST00000340647 MPTX1A8MV57 137 aa12.44□□□□□ -0.42
BRCC3-202ENST00000340647 DNASE2O00115 360 aaPredicted RBP12.44□□□□□ -0.42
BRCC3-202ENST00000340647 BUB3O43684 328 aa12.44□□□□□ -0.42
BRCC3-202ENST00000340647 TOMM40O96008 361 aa12.44□□□□□ -0.42
BRCC3-202ENST00000340647 IFNA10P01566 189 aa12.44□□□□□ -0.42
BRCC3-202ENST00000340647 PSG1P11464 419 aa12.44□□□□□ -0.42
BRCC3-202ENST00000340647 ATF4P18848 351 aaPredicted RBP12.44□□□□□ -0.42
BRCC3-202ENST00000340647 RPL11P62913 178 aaKnown RBP12.44□□□□□ -0.42
BRCC3-202ENST00000340647 PMS2P11Q13670 270 aa12.44□□□□□ -0.42
BRCC3-202ENST00000340647 GAMTQ14353 236 aa12.44□□□□□ -0.42
BRCC3-202ENST00000340647 TRPT1Q86TN4 253 aaKnown RBP12.44□□□□□ -0.42
BRCC3-202ENST00000340647 STXBP6Q8NFX7 210 aa12.44□□□□□ -0.42
BRCC3-202ENST00000340647 ACY3Q96HD9 319 aa12.44□□□□□ -0.42
BRCC3-202ENST00000340647 GRAMD2BQ96HH9 432 aa12.44□□□□□ -0.42
BRCC3-202ENST00000340647 RABAC1Q9UI14 185 aa12.44□□□□□ -0.42
BRCC3-202ENST00000340647 IGKV1OR2-108A0A075B7D4 117 aa12.43□□□□□ -0.42
BRCC3-202ENST00000340647 DUXBA0A1W2PPF3 345 aa12.43□□□□□ -0.42
BRCC3-202ENST00000340647 PRSS46E5RG02 174 aa12.43□□□□□ -0.42
BRCC3-202ENST00000340647 SFT2D2O95562 160 aa12.43□□□□□ -0.42
BRCC3-202ENST00000340647 IL4P05112 153 aa12.43□□□□□ -0.42
BRCC3-202ENST00000340647 HNRNPCP07910 306 aaKnown RBP eCLIP12.43□□□□□ -0.42
BRCC3-202ENST00000340647 FAUP35544 74 aaKnown RBP12.43□□□□□ -0.42
BRCC3-202ENST00000340647 SRPXP78539 464 aa12.43□□□□□ -0.42
BRCC3-202ENST00000340647 ZNF90Q03938 601 aa12.43□□□□□ -0.42
BRCC3-202ENST00000340647 Q8WTZ3 238 aa12.43□□□□□ -0.42
BRCC3-202ENST00000340647 SLC25A21Q9BQT8 299 aaPredicted RBP12.43□□□□□ -0.42
BRCC3-202ENST00000340647 TMEM231Q9H6L2 316 aa12.43□□□□□ -0.42
BRCC3-202ENST00000340647 KNCNA6PVL3 124 aa12.42□□□□□ -0.42
BRCC3-202ENST00000340647 ZNF688P0C7X2 276 aa12.42□□□□□ -0.42
BRCC3-202ENST00000340647 SLC25A6P12236 298 aa12.42□□□□□ -0.42
BRCC3-202ENST00000340647 ANXA3P12429 323 aa12.42□□□□□ -0.42
BRCC3-202ENST00000340647 C4BPBP20851 252 aa12.42□□□□□ -0.42
BRCC3-202ENST00000340647 S100A5P33763 92 aa12.42□□□□□ -0.42
BRCC3-202ENST00000340647 BTCP35070 178 aa12.42□□□□□ -0.42
BRCC3-202ENST00000340647 AP3S2P59780 193 aa12.42□□□□□ -0.42
BRCC3-202ENST00000340647 ETFRF1Q6IPR1 90 aa12.42□□□□□ -0.42
BRCC3-202ENST00000340647 GSG1LQ6UXU4 331 aa12.42□□□□□ -0.42
BRCC3-202ENST00000340647 OR1S1Q8NH92 325 aa12.42□□□□□ -0.42
BRCC3-202ENST00000340647 GATAD1Q8WUU5 269 aa12.42□□□□□ -0.42
BRCC3-202ENST00000340647 DEDD2Q8WXF8 326 aa12.42□□□□□ -0.42
BRCC3-202ENST00000340647 CACFD1Q9UGQ2 172 aa12.42□□□□□ -0.42
BRCC3-202ENST00000340647 CA1P00915 261 aaPredicted RBP12.41□□□□□ -0.42
BRCC3-202ENST00000340647 RD3LP0DJH9 198 aa12.41□□□□□ -0.42
BRCC3-202ENST00000340647 IAPPP10997 89 aa12.41□□□□□ -0.42
BRCC3-202ENST00000340647 VAMP1P23763 118 aa12.41□□□□□ -0.42
BRCC3-202ENST00000340647 GPX4P36969 197 aaPredicted RBP12.41□□□□□ -0.42
BRCC3-202ENST00000340647 OR51G1Q8NGK1 321 aa12.41□□□□□ -0.42
BRCC3-202ENST00000340647 OR11H2Q8NH07 326 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms