RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 SAV1Q9H4B6 383 aaPredicted RBP17.72■□□□□ 0.43
PDLIM2-203ENST00000339162 NAV2Q8IVL1 2488 aa17.72■□□□□ 0.43
PDLIM2-203ENST00000339162 OR5G3P0C626 314 aa17.72■□□□□ 0.43
PDLIM2-203ENST00000339162 PATE2Q6UY27 113 aa17.72■□□□□ 0.43
PDLIM2-203ENST00000339162 TMEM219Q86XT9 240 aa17.72■□□□□ 0.43
PDLIM2-203ENST00000339162 DNAJC4Q9NNZ3 241 aa17.72■□□□□ 0.43
PDLIM2-203ENST00000339162 YTHDF2Q9Y5A9 579 aaKnown RBP17.72■□□□□ 0.43
PDLIM2-203ENST00000339162 B4DSR2 109 aa17.71■□□□□ 0.43
PDLIM2-203ENST00000339162 AVPP01185 164 aa17.71■□□□□ 0.43
PDLIM2-203ENST00000339162 NPPCP23582 126 aa17.71■□□□□ 0.43
PDLIM2-203ENST00000339162 ZNF503Q96F45 646 aa17.71■□□□□ 0.43
PDLIM2-203ENST00000339162 C1RLQ9NZP8 487 aa17.71■□□□□ 0.43
PDLIM2-203ENST00000339162 ZANQ9Y493 2812 aa17.71■□□□□ 0.43
PDLIM2-203ENST00000339162 K7EIM0 57 aa17.71■□□□□ 0.43
PDLIM2-203ENST00000339162 COX7A2P2O60397 106 aa17.71■□□□□ 0.43
PDLIM2-203ENST00000339162 OR7C2O60412 319 aa17.71■□□□□ 0.43
PDLIM2-203ENST00000339162 OR10J4P0C629 311 aa17.71■□□□□ 0.43
PDLIM2-203ENST00000339162 ORM2P19652 201 aa17.71■□□□□ 0.43
PDLIM2-203ENST00000339162 TAGLN2P37802 199 aaKnown RBP17.71■□□□□ 0.43
PDLIM2-203ENST00000339162 RHEBQ15382 184 aa17.71■□□□□ 0.43
PDLIM2-203ENST00000339162 OR5T1Q8NG75 326 aa17.71■□□□□ 0.43
PDLIM2-203ENST00000339162 NANPQ8TBE9 248 aa17.71■□□□□ 0.43
PDLIM2-203ENST00000339162 RASL11BQ9BPW5 248 aa17.71■□□□□ 0.43
PDLIM2-203ENST00000339162 SMIM7Q9BQ49 75 aa17.71■□□□□ 0.43
PDLIM2-203ENST00000339162 SMCO4Q9NRQ5 59 aa17.71■□□□□ 0.43
PDLIM2-203ENST00000339162 DOPEY2Q9Y3R5 2298 aa17.7■□□□□ 0.42
PDLIM2-203ENST00000339162 NBPF19A0A087WUL8 3843 aa17.7■□□□□ 0.42
PDLIM2-203ENST00000339162 EGR2P11161 476 aaPredicted RBP17.7■□□□□ 0.42
PDLIM2-203ENST00000339162 SLC25A16P16260 332 aa17.7■□□□□ 0.42
PDLIM2-203ENST00000339162 PARLQ9H300 379 aa17.7■□□□□ 0.42
PDLIM2-203ENST00000339162 TECRQ9NZ01 308 aaKnown RBP17.7■□□□□ 0.42
PDLIM2-203ENST00000339162 TMEM250H0YL14 139 aa17.7■□□□□ 0.42
PDLIM2-203ENST00000339162 C10orf113Q5VZT2 155 aa17.7■□□□□ 0.42
PDLIM2-203ENST00000339162 HIST2H2BCQ6DN03 193 aa17.7■□□□□ 0.42
PDLIM2-203ENST00000339162 SELENOTP62341 195 aa17.69■□□□□ 0.42
PDLIM2-203ENST00000339162 TRGV9Q99603 122 aa17.69■□□□□ 0.42
PDLIM2-203ENST00000339162 C19orf24Q9BVV8 132 aa17.69■□□□□ 0.42
PDLIM2-203ENST00000339162 OR1B1Q8NGR6 318 aa17.68■□□□□ 0.42
PDLIM2-203ENST00000339162 RBM14Q96PK6 669 aaKnown RBP17.68■□□□□ 0.42
PDLIM2-203ENST00000339162 FANCD2OSQ96PS1 177 aa17.68■□□□□ 0.42
PDLIM2-203ENST00000339162 DERL1Q9BUN8 251 aa17.68■□□□□ 0.42
PDLIM2-203ENST00000339162 SDF2L1Q9HCN8 221 aa17.68■□□□□ 0.42
PDLIM2-203ENST00000339162 APCP25054 2843 aa17.68■□□□□ 0.42
PDLIM2-203ENST00000339162 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.68■□□□□ 0.42
PDLIM2-203ENST00000339162 A0A096LNT2 108 aa17.67■□□□□ 0.42
PDLIM2-203ENST00000339162 LINC01548A6NM66 108 aa17.67■□□□□ 0.42
PDLIM2-203ENST00000339162 HLA-DRB1P01911 266 aa17.67■□□□□ 0.42
PDLIM2-203ENST00000339162 SNRPCP09234 159 aaKnown RBP17.67■□□□□ 0.42
PDLIM2-203ENST00000339162 IGLC1P0CG04 106 aa17.67■□□□□ 0.42
PDLIM2-203ENST00000339162 C8orf88P0DMB2 117 aa17.67■□□□□ 0.42
PDLIM2-203ENST00000339162 PIFOQ8TCI5 191 aa17.67■□□□□ 0.42
PDLIM2-203ENST00000339162 SLC25A2Q9BXI2 301 aa17.67■□□□□ 0.42
PDLIM2-203ENST00000339162 ZNF355PQ9NSJ1 428 aa17.67■□□□□ 0.42
PDLIM2-203ENST00000339162 NPIPB5A8MRT5 1133 aa17.67■□□□□ 0.42
PDLIM2-203ENST00000339162 TIGITQ495A1 244 aa17.67■□□□□ 0.42
PDLIM2-203ENST00000339162 TTC9CQ8N5M4 171 aa17.67■□□□□ 0.42
PDLIM2-203ENST00000339162 FAM167A-AS1Q96KT0 104 aa17.67■□□□□ 0.42
PDLIM2-203ENST00000339162 RNF223E7ERA6 249 aa17.66■□□□□ 0.42
PDLIM2-203ENST00000339162 NDUFB4O95168 129 aa17.66■□□□□ 0.42
PDLIM2-203ENST00000339162 TAS2R45P59539 299 aa17.66■□□□□ 0.42
PDLIM2-203ENST00000339162 LINC00305Q7Z4B0 112 aa17.66■□□□□ 0.42
PDLIM2-203ENST00000339162 OR5AU1Q8NGC0 362 aa17.66■□□□□ 0.42
PDLIM2-203ENST00000339162 OR1L4Q8NGR5 311 aa17.66■□□□□ 0.42
PDLIM2-203ENST00000339162 PFDN5Q99471 154 aa17.66■□□□□ 0.42
PDLIM2-203ENST00000339162 IGLV11-55A0A075B6I3 123 aa17.66■□□□□ 0.42
PDLIM2-203ENST00000339162 CLN5O75503 358 aa17.66■□□□□ 0.42
PDLIM2-203ENST00000339162 PSG1P11464 419 aa17.66■□□□□ 0.42
PDLIM2-203ENST00000339162 BPIFB3P59826 476 aa17.66■□□□□ 0.42
PDLIM2-203ENST00000339162 ECSCRQ19T08 205 aa17.66■□□□□ 0.42
PDLIM2-203ENST00000339162 SSX3Q99909 188 aa17.66■□□□□ 0.42
PDLIM2-203ENST00000339162 TMUB1Q9BVT8 246 aa17.66■□□□□ 0.42
PDLIM2-203ENST00000339162 MRPL32Q9BYC8 188 aaKnown RBP17.66■□□□□ 0.42
PDLIM2-203ENST00000339162 CSPG4Q6UVK1 2322 aa17.65■□□□□ 0.42
PDLIM2-203ENST00000339162 SCO2A0A1W2PP80 73 aa17.65■□□□□ 0.42
PDLIM2-203ENST00000339162 COLCA2A8K830 154 aa17.65■□□□□ 0.42
PDLIM2-203ENST00000339162 ATP6V0E1O15342 81 aa17.65■□□□□ 0.42
PDLIM2-203ENST00000339162 PDE6DO43924 150 aa17.65■□□□□ 0.42
PDLIM2-203ENST00000339162 PYYP10082 97 aa17.65■□□□□ 0.42
PDLIM2-203ENST00000339162 PLA2G2AP14555 144 aa17.65■□□□□ 0.42
PDLIM2-203ENST00000339162 PQLC2Q6ZP29 291 aa17.65■□□□□ 0.42
PDLIM2-203ENST00000339162 BIN3Q9NQY0 253 aa17.65■□□□□ 0.42
PDLIM2-203ENST00000339162 IGHV3-23P01764 117 aa17.64■□□□□ 0.42
PDLIM2-203ENST00000339162 ADIRFQ15847 76 aa17.64■□□□□ 0.42
PDLIM2-203ENST00000339162 TMEM241Q24JQ0 296 aa17.64■□□□□ 0.42
PDLIM2-203ENST00000339162 DEFB113Q30KQ7 82 aa17.64■□□□□ 0.42
PDLIM2-203ENST00000339162 OR1L6Q8NGR2 347 aa17.64■□□□□ 0.42
PDLIM2-203ENST00000339162 OR2J3O76001 311 aa17.64■□□□□ 0.41
PDLIM2-203ENST00000339162 IGKV1-17P01599 117 aa17.64■□□□□ 0.41
PDLIM2-203ENST00000339162 LY6EQ16553 131 aa17.64■□□□□ 0.41
PDLIM2-203ENST00000339162 NAT8Q9UHE5 227 aa17.64■□□□□ 0.41
PDLIM2-203ENST00000339162 CRYBA1P05813 215 aa17.63■□□□□ 0.41
PDLIM2-203ENST00000339162 C5orf56Q8N8D9 126 aa17.63■□□□□ 0.41
PDLIM2-203ENST00000339162 LINC01356Q8N9X3 169 aa17.63■□□□□ 0.41
PDLIM2-203ENST00000339162 TMEM167BQ9NRX6 74 aa17.63■□□□□ 0.41
PDLIM2-203ENST00000339162 TRAV20A0A0B4J274 112 aa17.63■□□□□ 0.41
PDLIM2-203ENST00000339162 OR2C1O95371 312 aa17.63■□□□□ 0.41
PDLIM2-203ENST00000339162 TGFAP01135 160 aa17.63■□□□□ 0.41
PDLIM2-203ENST00000339162 LYZP61626 148 aa17.63■□□□□ 0.41
PDLIM2-203ENST00000339162 LEMD1Q68G75 181 aa17.63■□□□□ 0.41
PDLIM2-203ENST00000339162 UNQ5815/PRO19632Q6UWF5 114 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms