RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 FABP1P07148 127 aa21.29■■□□□ 1
CTDNEP1-201ENST00000318988 GPR183P32249 361 aa21.29■■□□□ 1
CTDNEP1-201ENST00000318988 CLEC19AQ6UXS0 136 aa21.29■■□□□ 1
CTDNEP1-201ENST00000318988 ATP6V0BQ99437 205 aa21.29■■□□□ 1
CTDNEP1-201ENST00000318988 TRGV9Q99603 122 aa21.29■■□□□ 1
CTDNEP1-201ENST00000318988 TEP1Q99973 2627 aaKnown RBP21.29■■□□□ 1
CTDNEP1-201ENST00000318988 IGKV1OR2-108A0A075B7D4 117 aa21.29■■□□□ 1
CTDNEP1-201ENST00000318988 TCRBV4S1A1TA0A5B7 111 aa21.29■■□□□ 1
CTDNEP1-201ENST00000318988 NUPL2O15504 423 aaKnown RBP21.29■■□□□ 1
CTDNEP1-201ENST00000318988 CLEC3BP05452 202 aa21.29■■□□□ 1
CTDNEP1-201ENST00000318988 FAM209BQ5JX69 171 aa21.29■■□□□ 1
CTDNEP1-201ENST00000318988 ZNF491Q8N8L2 437 aa21.29■■□□□ 1
CTDNEP1-201ENST00000318988 TIMM9Q9Y5J7 89 aa21.29■■□□□ 1
CTDNEP1-201ENST00000318988 IGLC1P0CG04 106 aa21.28■■□□□ 1
CTDNEP1-201ENST00000318988 KHDC1LQ5JSQ8 128 aa21.28■■□□□ 1
CTDNEP1-201ENST00000318988 CYP2G1PQ6ZSU1 146 aa21.28■■□□□ 1
CTDNEP1-201ENST00000318988 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP21.28■■□□□ 1
CTDNEP1-201ENST00000318988 OR2G3Q8NGZ4 309 aa21.28■■□□□ 1
CTDNEP1-201ENST00000318988 PHYHIPLQ96FC7 376 aa21.28■■□□□ 1
CTDNEP1-201ENST00000318988 CCDC140Q96MF4 163 aa21.28■■□□□ 1
CTDNEP1-201ENST00000318988 PSMG3Q9BT73 122 aaPredicted RBP21.28■■□□□ 1
CTDNEP1-201ENST00000318988 GGTLC1Q9BX51 225 aa21.28■■□□□ 1
CTDNEP1-201ENST00000318988 SH3BGRL3Q9H299 93 aa21.28■■□□□ 1
CTDNEP1-201ENST00000318988 SPP1P10451 314 aa21.27■■□□□ 1
CTDNEP1-201ENST00000318988 SELENOTP62341 195 aa21.27■■□□□ 1
CTDNEP1-201ENST00000318988 TMED6Q8WW62 240 aa21.27■■□□□ 1
CTDNEP1-201ENST00000318988 UBE2E2Q96LR5 201 aa21.27■■□□□ 1
CTDNEP1-201ENST00000318988 GNB4Q9HAV0 340 aa21.27■■□□□ 1
CTDNEP1-201ENST00000318988 NF1P21359 2839 aa21.26■□□□□ 0.99
CTDNEP1-201ENST00000318988 IGKV1D-37A0A075B6S9 117 aa21.26■□□□□ 0.99
CTDNEP1-201ENST00000318988 F8W735 103 aaPredicted RBP21.26■□□□□ 0.99
CTDNEP1-201ENST00000318988 SEC11BP0C7V7 166 aa21.26■□□□□ 0.99
CTDNEP1-201ENST00000318988 FOXL1Q12952 345 aa21.26■□□□□ 0.99
CTDNEP1-201ENST00000318988 TIGITQ495A1 244 aa21.26■□□□□ 0.99
CTDNEP1-201ENST00000318988 ZNF343Q6P1L6 599 aa21.26■□□□□ 0.99
CTDNEP1-201ENST00000318988 TEX261Q6UWH6 196 aa21.26■□□□□ 0.99
CTDNEP1-201ENST00000318988 MYOZ3Q8TDC0 251 aa21.26■□□□□ 0.99
CTDNEP1-201ENST00000318988 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP21.25■□□□□ 0.99
CTDNEP1-201ENST00000318988 IFNA7P01567 189 aa21.25■□□□□ 0.99
CTDNEP1-201ENST00000318988 PROK1P58294 105 aa21.25■□□□□ 0.99
CTDNEP1-201ENST00000318988 ZNF90Q03938 601 aa21.25■□□□□ 0.99
CTDNEP1-201ENST00000318988 KIAA0141Q14154 515 aaPredicted RBP21.25■□□□□ 0.99
CTDNEP1-201ENST00000318988 SPSB3Q6PJ21 355 aa21.25■□□□□ 0.99
CTDNEP1-201ENST00000318988 WIPF2Q8TF74 440 aaPredicted RBP21.25■□□□□ 0.99
CTDNEP1-201ENST00000318988 OR5B12Q96R08 314 aa21.25■□□□□ 0.99
CTDNEP1-201ENST00000318988 SLC45A2Q9UMX9 530 aa21.25■□□□□ 0.99
CTDNEP1-201ENST00000318988 PXMP4Q9Y6I8 212 aa21.25■□□□□ 0.99
CTDNEP1-201ENST00000318988 NIPBLQ6KC79 2804 aaeCLIP21.25■□□□□ 0.99
CTDNEP1-201ENST00000318988 ANKRD34BA5PLL1 514 aa21.24■□□□□ 0.99
CTDNEP1-201ENST00000318988 CFDP00746 253 aaPredicted RBP21.24■□□□□ 0.99
CTDNEP1-201ENST00000318988 RPL29P47914 159 aaKnown RBP21.24■□□□□ 0.99
CTDNEP1-201ENST00000318988 SERF2P84101 59 aa21.24■□□□□ 0.99
CTDNEP1-201ENST00000318988 ZNF616Q08AN1 781 aa21.24■□□□□ 0.99
CTDNEP1-201ENST00000318988 ALKAL2Q6UX46 152 aa21.24■□□□□ 0.99
CTDNEP1-201ENST00000318988 BPIFCQ8NFQ6 507 aa21.24■□□□□ 0.99
CTDNEP1-201ENST00000318988 TGOLN2O43493 480 aa21.24■□□□□ 0.99
CTDNEP1-201ENST00000318988 TSPAN15O95858 294 aa21.24■□□□□ 0.99
CTDNEP1-201ENST00000318988 IGKV1-17P01599 117 aa21.24■□□□□ 0.99
CTDNEP1-201ENST00000318988 MIC13Q5XKP0 118 aa21.24■□□□□ 0.99
CTDNEP1-201ENST00000318988 STPG3Q8N7X2 389 aa21.24■□□□□ 0.99
CTDNEP1-201ENST00000318988 CTSGP08311 255 aa21.23■□□□□ 0.99
CTDNEP1-201ENST00000318988 RD3LP0DJH9 198 aa21.23■□□□□ 0.99
CTDNEP1-201ENST00000318988 ARL3P36405 182 aa21.23■□□□□ 0.99
CTDNEP1-201ENST00000318988 YPEL3P61236 119 aaPredicted RBP21.23■□□□□ 0.99
CTDNEP1-201ENST00000318988 B2MP61769 119 aa21.23■□□□□ 0.99
CTDNEP1-201ENST00000318988 FFAR4Q5NUL3 377 aa21.23■□□□□ 0.99
CTDNEP1-201ENST00000318988 AKR1C8PQ5T2L2 129 aa21.23■□□□□ 0.99
CTDNEP1-201ENST00000318988 Q6ZRG5 221 aa21.23■□□□□ 0.99
CTDNEP1-201ENST00000318988 PEF1Q9UBV8 284 aaKnown RBP21.23■□□□□ 0.99
CTDNEP1-201ENST00000318988 RFNGQ9Y644 331 aa21.23■□□□□ 0.99
CTDNEP1-201ENST00000318988 CDX1P47902 265 aaPredicted RBP21.22■□□□□ 0.99
CTDNEP1-201ENST00000318988 ELLP55199 621 aaPredicted RBP21.22■□□□□ 0.99
CTDNEP1-201ENST00000318988 TCTEX1D4Q5JR98 221 aa21.22■□□□□ 0.99
CTDNEP1-201ENST00000318988 TMEM182Q6ZP80 229 aaPredicted RBP21.22■□□□□ 0.99
CTDNEP1-201ENST00000318988 C11orf44Q8N8P7 122 aa21.22■□□□□ 0.99
CTDNEP1-201ENST00000318988 Q8WTZ3 238 aa21.22■□□□□ 0.99
CTDNEP1-201ENST00000318988 SLC39A9Q9NUM3 307 aa21.22■□□□□ 0.99
CTDNEP1-201ENST00000318988 TOMM40O96008 361 aa21.21■□□□□ 0.99
CTDNEP1-201ENST00000318988 LGALS1P09382 135 aaKnown RBP21.21■□□□□ 0.99
CTDNEP1-201ENST00000318988 CD28P10747 220 aa21.21■□□□□ 0.99
CTDNEP1-201ENST00000318988 GATA2P23769 480 aaPredicted RBP21.21■□□□□ 0.99
CTDNEP1-201ENST00000318988 RELQ04864 619 aaPredicted RBP21.21■□□□□ 0.99
CTDNEP1-201ENST00000318988 ZNF680Q8NEM1 530 aa21.21■□□□□ 0.99
CTDNEP1-201ENST00000318988 CHRDL1Q9BU40 450 aa21.21■□□□□ 0.99
CTDNEP1-201ENST00000318988 PPP5D1E7EU14 171 aa21.2■□□□□ 0.98
CTDNEP1-201ENST00000318988 MBP02144 154 aa21.2■□□□□ 0.98
CTDNEP1-201ENST00000318988 LINC00869P0C866 280 aa21.2■□□□□ 0.98
CTDNEP1-201ENST00000318988 PRR20EP86478 221 aa21.2■□□□□ 0.98
CTDNEP1-201ENST00000318988 PRR20CP86479 221 aa21.2■□□□□ 0.98
CTDNEP1-201ENST00000318988 PRR20DP86480 221 aa21.2■□□□□ 0.98
CTDNEP1-201ENST00000318988 PRR20BP86481 221 aa21.2■□□□□ 0.98
CTDNEP1-201ENST00000318988 PRR20AP86496 221 aa21.2■□□□□ 0.98
CTDNEP1-201ENST00000318988 WFDC12Q8WWY7 111 aa21.2■□□□□ 0.98
CTDNEP1-201ENST00000318988 NUDT19A8MXV4 375 aa21.19■□□□□ 0.98
CTDNEP1-201ENST00000318988 UMAD1C9J7I0 102 aa21.19■□□□□ 0.98
CTDNEP1-201ENST00000318988 PSG1P11464 419 aa21.19■□□□□ 0.98
CTDNEP1-201ENST00000318988 ADMP35318 185 aa21.19■□□□□ 0.98
CTDNEP1-201ENST00000318988 ACOT6Q3I5F7 207 aaPredicted RBP21.19■□□□□ 0.98
CTDNEP1-201ENST00000318988 UBQLN2Q9UHD9 624 aa21.19■□□□□ 0.98
CTDNEP1-201ENST00000318988 ZNF600Q6ZNG1 722 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms