RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 PGPA6NDG6 321 aa11.92□□□□□ -0.5
COL6A2-202ENST00000310645 F2RL2O00254 374 aa11.92□□□□□ -0.5
COL6A2-202ENST00000310645 RNASE2P10153 161 aaKnown RBP11.92□□□□□ -0.5
COL6A2-202ENST00000310645 UQCRFS1P47985 274 aa11.92□□□□□ -0.5
COL6A2-202ENST00000310645 VWA1Q6PCB0 445 aa11.92□□□□□ -0.5
COL6A2-202ENST00000310645 GSX1Q9H4S2 264 aaPredicted RBP11.92□□□□□ -0.5
COL6A2-202ENST00000310645 CEP250Q9BV73 2442 aa11.91□□□□□ -0.5
COL6A2-202ENST00000310645 C9orf172C9J069 976 aa11.91□□□□□ -0.5
COL6A2-202ENST00000310645 FAM120AOSQ5T036 256 aa11.91□□□□□ -0.5
COL6A2-202ENST00000310645 LINC00322Q6ZN03 302 aaPredicted RBP11.91□□□□□ -0.5
COL6A2-202ENST00000310645 RBMXL3Q8N7X1 1067 aaKnown RBP11.91□□□□□ -0.5
COL6A2-202ENST00000310645 TRAV8-6A0A0B4J262 113 aa11.91□□□□□ -0.5
COL6A2-202ENST00000310645 GAGE12BA1L429 117 aa11.91□□□□□ -0.5
COL6A2-202ENST00000310645 SRRM5B3KS81 715 aa11.91□□□□□ -0.5
COL6A2-202ENST00000310645 OR2J3O76001 311 aa11.91□□□□□ -0.5
COL6A2-202ENST00000310645 REG1BP48304 166 aa11.91□□□□□ -0.5
COL6A2-202ENST00000310645 C17orf58Q2M2W7 97 aa11.91□□□□□ -0.5
COL6A2-202ENST00000310645 DEFB125Q8N687 156 aa11.91□□□□□ -0.5
COL6A2-202ENST00000310645 C19orf24Q9BVV8 132 aa11.91□□□□□ -0.5
COL6A2-202ENST00000310645 CHEK1O14757 476 aa11.91□□□□□ -0.5
COL6A2-202ENST00000310645 SAA1P0DJI8 122 aaPredicted RBP11.91□□□□□ -0.5
COL6A2-202ENST00000310645 RHOGP84095 191 aa11.91□□□□□ -0.5
COL6A2-202ENST00000310645 C12orf54Q6X4T0 127 aa11.91□□□□□ -0.5
COL6A2-202ENST00000310645 FAM231DQ6ZW35 169 aa11.91□□□□□ -0.5
COL6A2-202ENST00000310645 NAA38Q9BRA0 125 aaKnown RBP11.91□□□□□ -0.5
COL6A2-202ENST00000310645 RIPPLY3P57055 190 aa11.9□□□□□ -0.5
COL6A2-202ENST00000310645 FOXE3Q13461 319 aa11.9□□□□□ -0.5
COL6A2-202ENST00000310645 C10orf55Q5SWW7 151 aa11.9□□□□□ -0.5
COL6A2-202ENST00000310645 TMEM177Q53S58 311 aa11.9□□□□□ -0.5
COL6A2-202ENST00000310645 MRPL32Q9BYC8 188 aaKnown RBP11.9□□□□□ -0.5
COL6A2-202ENST00000310645 PPIAL4DF5H284 164 aa11.89□□□□□ -0.51
COL6A2-202ENST00000310645 MOSP00540 346 aa11.89□□□□□ -0.51
COL6A2-202ENST00000310645 PPBPP02775 128 aa11.89□□□□□ -0.51
COL6A2-202ENST00000310645 C2orf83Q53S99 150 aa11.89□□□□□ -0.51
COL6A2-202ENST00000310645 PATE2Q6UY27 113 aa11.89□□□□□ -0.51
COL6A2-202ENST00000310645 Q6ZT83 130 aa11.89□□□□□ -0.51
COL6A2-202ENST00000310645 LINC00305Q7Z4B0 112 aa11.89□□□□□ -0.51
COL6A2-202ENST00000310645 PDPNQ86YL7 162 aa11.89□□□□□ -0.51
COL6A2-202ENST00000310645 DAZAP1Q96EP5 407 aaKnown RBP11.89□□□□□ -0.51
COL6A2-202ENST00000310645 MAP1LC3CQ9BXW4 147 aa11.89□□□□□ -0.51
COL6A2-202ENST00000310645 MUC3AQ02505 3323 aa11.89□□□□□ -0.51
COL6A2-202ENST00000310645 E7EUB6 86 aa11.89□□□□□ -0.51
COL6A2-202ENST00000310645 FNDC10F2Z333 226 aa11.89□□□□□ -0.51
COL6A2-202ENST00000310645 P01737 135 aa11.89□□□□□ -0.51
COL6A2-202ENST00000310645 CHRDL1Q9BU40 450 aa11.89□□□□□ -0.51
COL6A2-202ENST00000310645 IGHV3-21A0A0B4J1V1 117 aa11.89□□□□□ -0.51
COL6A2-202ENST00000310645 KBTBD11-OT1A0A1B0GTJ5 212 aa11.89□□□□□ -0.51
COL6A2-202ENST00000310645 SAP30O75446 220 aa11.89□□□□□ -0.51
COL6A2-202ENST00000310645 CT45A6P0DMU7 189 aa11.89□□□□□ -0.51
COL6A2-202ENST00000310645 CT45A5P0DMU8 189 aa11.89□□□□□ -0.51
COL6A2-202ENST00000310645 CT45A7P0DMV0 189 aa11.89□□□□□ -0.51
COL6A2-202ENST00000310645 ERHP84090 104 aaKnown RBP11.89□□□□□ -0.51
COL6A2-202ENST00000310645 OR1B1Q8NGR6 318 aa11.89□□□□□ -0.51
COL6A2-202ENST00000310645 ZNF835Q9Y2P0 537 aa11.89□□□□□ -0.51
COL6A2-202ENST00000310645 IGKV3-15P01624 115 aa11.88□□□□□ -0.51
COL6A2-202ENST00000310645 APELAP0DMC3 54 aa11.88□□□□□ -0.51
COL6A2-202ENST00000310645 MSMPQ1L6U9 139 aa11.88□□□□□ -0.51
COL6A2-202ENST00000310645 GTSF1Q8WW33 167 aa11.88□□□□□ -0.51
COL6A2-202ENST00000310645 MEGF9Q9H1U4 602 aa11.88□□□□□ -0.51
COL6A2-202ENST00000310645 RPP21Q9H633 154 aaKnown RBP11.88□□□□□ -0.51
COL6A2-202ENST00000310645 EPDR1Q9UM22 224 aa11.88□□□□□ -0.51
COL6A2-202ENST00000310645 GVINP1Q7Z2Y8 2422 aa11.88□□□□□ -0.51
COL6A2-202ENST00000310645 HARBI1Q96MB7 349 aa11.88□□□□□ -0.51
COL6A2-202ENST00000310645 A0A1B0GXF2 115 aa11.88□□□□□ -0.51
COL6A2-202ENST00000310645 A8MWL6 223 aa11.88□□□□□ -0.51
COL6A2-202ENST00000310645 ITLN1Q8WWA0 313 aa11.88□□□□□ -0.51
COL6A2-202ENST00000310645 ADTRPQ96IZ2 230 aa11.88□□□□□ -0.51
COL6A2-202ENST00000310645 ZPBPQ9BS86 351 aa11.88□□□□□ -0.51
COL6A2-202ENST00000310645 TMUB1Q9BVT8 246 aa11.88□□□□□ -0.51
COL6A2-202ENST00000310645 FNDC4Q9H6D8 234 aaPredicted RBP11.88□□□□□ -0.51
COL6A2-202ENST00000310645 FXYD5Q96DB9 178 aa11.87□□□□□ -0.51
COL6A2-202ENST00000310645 CCL13Q99616 98 aa11.87□□□□□ -0.51
COL6A2-202ENST00000310645 C7orf71A4D174 169 aa11.87□□□□□ -0.51
COL6A2-202ENST00000310645 PSMB11A5LHX3 300 aa11.87□□□□□ -0.51
COL6A2-202ENST00000310645 K7ERU9 68 aa11.87□□□□□ -0.51
COL6A2-202ENST00000310645 GPR183P32249 361 aa11.87□□□□□ -0.51
COL6A2-202ENST00000310645 BPIFB3P59826 476 aa11.87□□□□□ -0.51
COL6A2-202ENST00000310645 ARF6P62330 175 aa11.87□□□□□ -0.51
COL6A2-202ENST00000310645 FAM162BQ5T6X4 162 aa11.87□□□□□ -0.51
COL6A2-202ENST00000310645 TEX45Q8NA69 505 aa11.87□□□□□ -0.51
COL6A2-202ENST00000310645 GPR82Q96P67 336 aa11.87□□□□□ -0.51
COL6A2-202ENST00000310645 ASCL2Q99929 193 aa11.87□□□□□ -0.51
COL6A2-202ENST00000310645 MRPL36Q9P0J6 103 aaKnown RBP11.87□□□□□ -0.51
COL6A2-202ENST00000310645 ZNF257Q9Y2Q1 563 aa11.87□□□□□ -0.51
COL6A2-202ENST00000310645 TRAV8-1A0A0A6YYK1 113 aa11.86□□□□□ -0.51
COL6A2-202ENST00000310645 DLL1O00548 723 aa11.86□□□□□ -0.51
COL6A2-202ENST00000310645 ATP5L2Q7Z4Y8 100 aa11.86□□□□□ -0.51
COL6A2-202ENST00000310645 MDS2Q8NDY4 140 aa11.86□□□□□ -0.51
COL6A2-202ENST00000310645 OR1L4Q8NGR5 311 aa11.86□□□□□ -0.51
COL6A2-202ENST00000310645 SARAFQ96BY9 339 aa11.86□□□□□ -0.51
COL6A2-202ENST00000310645 SCRT2Q9NQ03 307 aa11.86□□□□□ -0.51
COL6A2-202ENST00000310645 TPPP3Q9BW30 176 aa11.86□□□□□ -0.51
COL6A2-202ENST00000310645 ZNF430Q9H8G1 570 aaPredicted RBP11.86□□□□□ -0.51
COL6A2-202ENST00000310645 DCHS1Q96JQ0 3298 aa11.86□□□□□ -0.51
COL6A2-202ENST00000310645 IGHV1-18A0A0C4DH31 117 aa11.86□□□□□ -0.51
COL6A2-202ENST00000310645 GAGE10A6NGK3 116 aa11.86□□□□□ -0.51
COL6A2-202ENST00000310645 HTR1DP28221 377 aa11.86□□□□□ -0.51
COL6A2-202ENST00000310645 FAM216BQ8N7L0 139 aa11.86□□□□□ -0.51
COL6A2-202ENST00000310645 OR1L8Q8NGR8 309 aa11.86□□□□□ -0.51
COL6A2-202ENST00000310645 FLYWCH2Q96CP2 140 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms