RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 KIR2DL5BA0A0G2JN68 375 aa14.61□□□□□ -0.07
PDZRN3-202ENST00000308537 KIR2DL5BA0A0G2JPC4 375 aa14.61□□□□□ -0.07
PDZRN3-202ENST00000308537 CEBPZOSA8MTT3 80 aa14.61□□□□□ -0.07
PDZRN3-202ENST00000308537 TFPI2P48307 235 aa14.61□□□□□ -0.07
PDZRN3-202ENST00000308537 CCR6P51684 374 aa14.61□□□□□ -0.07
PDZRN3-202ENST00000308537 EWSR1Q01844 656 aaKnown RBP eCLIP14.61□□□□□ -0.07
PDZRN3-202ENST00000308537 SMCO1Q147U7 214 aa14.61□□□□□ -0.07
PDZRN3-202ENST00000308537 KIR2DL5AQ8N109 375 aa14.61□□□□□ -0.07
PDZRN3-202ENST00000308537 KIR2DL5BQ8NHK3 375 aa14.61□□□□□ -0.07
PDZRN3-202ENST00000308537 C7orf50Q9BRJ6 194 aaKnown RBP14.61□□□□□ -0.07
PDZRN3-202ENST00000308537 TP53TG1Q9Y2A0 90 aa14.61□□□□□ -0.07
PDZRN3-202ENST00000308537 HYDINQ4G0P3 5121 aa14.6□□□□□ -0.07
PDZRN3-202ENST00000308537 NPY1RP25929 384 aa14.6□□□□□ -0.07
PDZRN3-202ENST00000308537 RND2P52198 227 aa14.6□□□□□ -0.07
PDZRN3-202ENST00000308537 RBMS2Q15434 407 aaKnown RBP14.6□□□□□ -0.07
PDZRN3-202ENST00000308537 TMEM128Q5BJH2 165 aa14.6□□□□□ -0.07
PDZRN3-202ENST00000308537 TMED4Q7Z7H5 227 aa14.6□□□□□ -0.07
PDZRN3-202ENST00000308537 LGI3Q8N145 548 aa14.6□□□□□ -0.07
PDZRN3-202ENST00000308537 GBGT1Q8N5D6 347 aa14.6□□□□□ -0.07
PDZRN3-202ENST00000308537 LRTM2Q8N967 370 aa14.6□□□□□ -0.07
PDZRN3-202ENST00000308537 SDHCQ99643 169 aaPredicted RBP14.6□□□□□ -0.07
PDZRN3-202ENST00000308537 MS4A6AQ9H2W1 248 aa14.6□□□□□ -0.07
PDZRN3-202ENST00000308537 RPL35AP18077 110 aaKnown RBP14.59□□□□□ -0.07
PDZRN3-202ENST00000308537 APOC4P55056 127 aa14.59□□□□□ -0.07
PDZRN3-202ENST00000308537 BAK1Q16611 211 aa14.59□□□□□ -0.07
PDZRN3-202ENST00000308537 DEFB135Q30KP9 77 aa14.59□□□□□ -0.07
PDZRN3-202ENST00000308537 RNF183Q96D59 192 aa14.59□□□□□ -0.07
PDZRN3-202ENST00000308537 RBKSQ9H477 322 aa14.59□□□□□ -0.07
PDZRN3-202ENST00000308537 TRAV30A0A087WSZ9 112 aa14.58□□□□□ -0.08
PDZRN3-202ENST00000308537 TRAV2A0A0B4J234 112 aa14.58□□□□□ -0.08
PDZRN3-202ENST00000308537 RPS10-NUDT3A0A1W2PQS6 291 aa14.58□□□□□ -0.08
PDZRN3-202ENST00000308537 UBE2CO00762 179 aa14.58□□□□□ -0.08
PDZRN3-202ENST00000308537 CD5P06127 495 aa14.58□□□□□ -0.08
PDZRN3-202ENST00000308537 SLC25A4P12235 298 aa14.58□□□□□ -0.08
PDZRN3-202ENST00000308537 YPEL3P61236 119 aaPredicted RBP14.58□□□□□ -0.08
PDZRN3-202ENST00000308537 CNPY1Q3B7I2 92 aa14.58□□□□□ -0.08
PDZRN3-202ENST00000308537 OR1S2Q8NGQ3 325 aa14.58□□□□□ -0.08
PDZRN3-202ENST00000308537 DTD1Q8TEA8 209 aa14.58□□□□□ -0.08
PDZRN3-202ENST00000308537 S100ZQ8WXG8 99 aa14.58□□□□□ -0.08
PDZRN3-202ENST00000308537 BATF3Q9NR55 127 aa14.58□□□□□ -0.08
PDZRN3-202ENST00000308537 DUXBA0A1W2PPF3 345 aa14.57□□□□□ -0.08
PDZRN3-202ENST00000308537 A6NHS1 94 aa14.57□□□□□ -0.08
PDZRN3-202ENST00000308537 SPRY2O43597 315 aa14.57□□□□□ -0.08
PDZRN3-202ENST00000308537 NPPCP23582 126 aa14.57□□□□□ -0.08
PDZRN3-202ENST00000308537 PPP1R1AQ13522 171 aa14.57□□□□□ -0.08
PDZRN3-202ENST00000308537 USF2Q15853 346 aaPredicted RBP14.57□□□□□ -0.08
PDZRN3-202ENST00000308537 CENPSQ8N2Z9 138 aa14.57□□□□□ -0.08
PDZRN3-202ENST00000308537 U3KQ87 197 aa14.57□□□□□ -0.08
PDZRN3-202ENST00000308537 OR10J1P30954 320 aa14.56□□□□□ -0.08
PDZRN3-202ENST00000308537 UBE2MP61081 183 aaKnown RBP14.56□□□□□ -0.08
PDZRN3-202ENST00000308537 DCANP1Q8TF63 244 aa14.56□□□□□ -0.08
PDZRN3-202ENST00000308537 NPIPB3Q92617 1050 aa14.56□□□□□ -0.08
PDZRN3-202ENST00000308537 METTL26Q96S19 204 aa14.56□□□□□ -0.08
PDZRN3-202ENST00000308537 IGKV1D-37A0A075B6S9 117 aa14.55□□□□□ -0.08
PDZRN3-202ENST00000308537 K7EQG2 157 aa14.55□□□□□ -0.08
PDZRN3-202ENST00000308537 SFT2D2O95562 160 aa14.55□□□□□ -0.08
PDZRN3-202ENST00000308537 SLC25A6P12236 298 aa14.55□□□□□ -0.08
PDZRN3-202ENST00000308537 IL7P13232 177 aa14.55□□□□□ -0.08
PDZRN3-202ENST00000308537 VAMP1P23763 118 aa14.55□□□□□ -0.08
PDZRN3-202ENST00000308537 BMI1P35226 326 aa14.55□□□□□ -0.08
PDZRN3-202ENST00000308537 P2RY1P47900 373 aa14.55□□□□□ -0.08
PDZRN3-202ENST00000308537 GLMPQ8WWB7 406 aa14.55□□□□□ -0.08
PDZRN3-202ENST00000308537 CCDC32Q9BV29 185 aa14.55□□□□□ -0.08
PDZRN3-202ENST00000308537 A0A0J9YWU9 116 aa14.54□□□□□ -0.08
PDZRN3-202ENST00000308537 LINC00854A0A1B0GVQ3 168 aa14.54□□□□□ -0.08
PDZRN3-202ENST00000308537 BTCP35070 178 aa14.54□□□□□ -0.08
PDZRN3-202ENST00000308537 CMC4P56277 68 aaPredicted RBP14.54□□□□□ -0.08
PDZRN3-202ENST00000308537 DEFB131AP59861 70 aa14.54□□□□□ -0.08
PDZRN3-202ENST00000308537 LYG2Q86SG7 212 aa14.54□□□□□ -0.08
PDZRN3-202ENST00000308537 STPG3Q8N7X2 389 aa14.54□□□□□ -0.08
PDZRN3-202ENST00000308537 IL17DQ8TAD2 202 aa14.54□□□□□ -0.08
PDZRN3-202ENST00000308537 TMEM231Q9H6L2 316 aa14.54□□□□□ -0.08
PDZRN3-202ENST00000308537 A0A1W2PS18 150 aa14.53□□□□□ -0.08
PDZRN3-202ENST00000308537 NDUFB6O95139 128 aa14.53□□□□□ -0.08
PDZRN3-202ENST00000308537 TOMM40O96008 361 aa14.53□□□□□ -0.08
PDZRN3-202ENST00000308537 IFNA10P01566 189 aa14.53□□□□□ -0.08
PDZRN3-202ENST00000308537 PAFAH1B2P68402 229 aa14.53□□□□□ -0.08
PDZRN3-202ENST00000308537 LEMD1Q68G75 181 aa14.53□□□□□ -0.08
PDZRN3-202ENST00000308537 ETFRF1Q6IPR1 90 aa14.53□□□□□ -0.08
PDZRN3-202ENST00000308537 C16orf54Q6UWD8 224 aa14.53□□□□□ -0.08
PDZRN3-202ENST00000308537 NOXA1Q86UR1 476 aa14.53□□□□□ -0.08
PDZRN3-202ENST00000308537 OR1S1Q8NH92 325 aa14.53□□□□□ -0.08
PDZRN3-202ENST00000308537 ACY3Q96HD9 319 aa14.53□□□□□ -0.08
PDZRN3-202ENST00000308537 CSTL1Q9H114 145 aa14.53□□□□□ -0.08
PDZRN3-202ENST00000308537 PRSS46E5RG02 174 aa14.52□□□□□ -0.09
PDZRN3-202ENST00000308537 GIG44P09565 113 aaPredicted RBP14.52□□□□□ -0.09
PDZRN3-202ENST00000308537 PSG1P11464 419 aa14.52□□□□□ -0.09
PDZRN3-202ENST00000308537 GAMTQ14353 236 aa14.52□□□□□ -0.09
PDZRN3-202ENST00000308537 Q8WTZ3 238 aa14.52□□□□□ -0.09
PDZRN3-202ENST00000308537 GRAMD2BQ96HH9 432 aa14.52□□□□□ -0.09
PDZRN3-202ENST00000308537 PTTG2Q9NZH5 202 aa14.52□□□□□ -0.09
PDZRN3-202ENST00000308537 TMED3Q9Y3Q3 217 aa14.52□□□□□ -0.09
PDZRN3-202ENST00000308537 FAM90A26D6RGX4 464 aa14.51□□□□□ -0.09
PDZRN3-202ENST00000308537 BUB3O43684 328 aa14.51□□□□□ -0.09
PDZRN3-202ENST00000308537 IL4P05112 153 aa14.51□□□□□ -0.09
PDZRN3-202ENST00000308537 HNRNPCP07910 306 aaKnown RBP eCLIP14.51□□□□□ -0.09
PDZRN3-202ENST00000308537 ATP5IP56385 69 aaPredicted RBP14.51□□□□□ -0.09
PDZRN3-202ENST00000308537 IGKV1OR2-108A0A075B7D4 117 aa14.5□□□□□ -0.09
PDZRN3-202ENST00000308537 DNASE2O00115 360 aaPredicted RBP14.5□□□□□ -0.09
PDZRN3-202ENST00000308537 SCGB2A1O75556 95 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms