RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 LSM5Q9Y4Y9 91 aaKnown RBP4.51□□□□□ -1.69
SSX3-201ENST00000298396 IGKV1OR2-108A0A075B7D4 117 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 IGHV3-35A0A0C4DH35 117 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 A0A0G2JLM5 398 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 FAM24AA6NFZ4 105 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 OR2T8A6NH00 312 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 LINC01619G3V211 115 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 M0QZ24 198 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 MPC2O95563 127 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 IFNA10P01566 189 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 IGKV1-17P01599 117 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 HSPB1P04792 205 aaKnown RBP4.5□□□□□ -1.69
SSX3-201ENST00000298396 CTSGP08311 255 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 LYL1P12980 280 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 GYPEP15421 78 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 HOXD3P31249 432 aaPredicted RBP4.5□□□□□ -1.69
SSX3-201ENST00000298396 FCGR2BP31994 310 aaPredicted RBP4.5□□□□□ -1.69
SSX3-201ENST00000298396 GPR183P32249 361 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 SNCAP37840 140 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 S100A10P60903 97 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 ZNF616Q08AN1 781 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 LRRC37A5PQ49AS3 106 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 SPANXN5Q5MJ07 72 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 LCE4AQ5TA78 99 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 CLEC19AQ6UXS0 136 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 IL34Q6ZMJ4 242 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 ADAMTSL5Q6ZMM2 481 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 OR1N2Q8NGR9 330 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 PPP1R1CQ8WVI7 109 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 DLX4Q92988 240 aaPredicted RBP4.5□□□□□ -1.69
SSX3-201ENST00000298396 EEF1AKMT3Q96AZ1 226 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 PINX1Q96BK5 328 aaKnown RBP4.5□□□□□ -1.69
SSX3-201ENST00000298396 WWC2-AS2Q96NR7 200 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 RAB40CQ96S21 281 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 ZNF436Q9C0F3 470 aaPredicted RBP4.5□□□□□ -1.69
SSX3-201ENST00000298396 HIPK2Q9H2X6 1198 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 C21orf62Q9NYP8 219 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 PSENENQ9NZ42 101 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 PEF1Q9UBV8 284 aaKnown RBP4.5□□□□□ -1.69
SSX3-201ENST00000298396 CACFD1Q9UGQ2 172 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 U3KQ87 197 aa4.5□□□□□ -1.69
SSX3-201ENST00000298396 IGHV3OR16-8A0A075B7F1 116 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 TRBV7-1A0A0A6YYK4 115 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 KRTAP9-7A8MTY7 169 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 SMLR1H3BR10 107 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 TGOLN2O43493 480 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 TSC22D2O75157 780 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 OR2C1O95371 312 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 CLEC3BP05452 202 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 GIPP09681 153 aaPredicted RBP4.49□□□□□ -1.69
SSX3-201ENST00000298396 METTL15P1P0C7V9 234 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 IGLC1P0CG04 106 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 ARL3P36405 182 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 MYCNOSP40205 109 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 OPRK1P41145 380 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 RND2P52198 227 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 SUB1P53999 127 aaKnown RBP eCLIP4.49□□□□□ -1.69
SSX3-201ENST00000298396 TAS2R30P59541 319 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 CD300CQ08708 224 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 KLF5Q13887 457 aaPredicted RBP4.49□□□□□ -1.69
SSX3-201ENST00000298396 GAMTQ14353 236 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 TIGITQ495A1 244 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 UNQ9165/PRO28630Q6UXU0 137 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 Q6ZSN1 163 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 SLC16A13Q7RTY0 426 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 TMEM116Q8NCL8 245 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 WFDC9Q8NEX5 89 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 OR4F17Q8NGA8 305 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 OR1L6Q8NGR2 347 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 OR4X1Q8NH49 305 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 RNASEH2CQ8TDP1 164 aaKnown RBP4.49□□□□□ -1.69
SSX3-201ENST00000298396 DCUN1D4Q92564 292 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 CXorf58Q96LI9 332 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 CIB3Q96Q77 187 aaPredicted RBP4.49□□□□□ -1.69
SSX3-201ENST00000298396 OR4F4Q96R69 305 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 LYRM2Q9NU23 88 aaPredicted RBP4.49□□□□□ -1.69
SSX3-201ENST00000298396 MBD2Q9UBB5 411 aa4.49□□□□□ -1.69
SSX3-201ENST00000298396 STRAPQ9Y3F4 350 aaKnown RBP4.49□□□□□ -1.69
SSX3-201ENST00000298396 DNAH9Q9NYC9 4486 aa4.48□□□□□ -1.69
SSX3-201ENST00000298396 CORTO00230 105 aa4.48□□□□□ -1.69
SSX3-201ENST00000298396 CLN5O75503 358 aa4.48□□□□□ -1.69
SSX3-201ENST00000298396 CST7O76096 145 aa4.48□□□□□ -1.69
SSX3-201ENST00000298396 IFNA4P05014 189 aa4.48□□□□□ -1.69
SSX3-201ENST00000298396 CSN3P07498 182 aa4.48□□□□□ -1.69
SSX3-201ENST00000298396 OR8U8P0C7N1 319 aa4.48□□□□□ -1.69
SSX3-201ENST00000298396 GPX4P36969 197 aaPredicted RBP4.48□□□□□ -1.69
SSX3-201ENST00000298396 MFAP4P55083 255 aa4.48□□□□□ -1.69
SSX3-201ENST00000298396 ATP5IP56385 69 aaPredicted RBP4.48□□□□□ -1.69
SSX3-201ENST00000298396 SYNJ2BPP57105 145 aa4.48□□□□□ -1.69
SSX3-201ENST00000298396 CYCSP99999 105 aaKnown RBP4.48□□□□□ -1.69
SSX3-201ENST00000298396 NHLH2Q02577 135 aa4.48□□□□□ -1.69
SSX3-201ENST00000298396 ICAM4Q14773 271 aa4.48□□□□□ -1.69
SSX3-201ENST00000298396 Q56UQ5 140 aa4.48□□□□□ -1.69
SSX3-201ENST00000298396 OR8G2PQ6IF36 304 aa4.48□□□□□ -1.69
SSX3-201ENST00000298396 ACSM6Q6P461 480 aa4.48□□□□□ -1.69
SSX3-201ENST00000298396 TMEM182Q6ZP80 229 aaPredicted RBP4.48□□□□□ -1.69
SSX3-201ENST00000298396 ACOT7LQ6ZUV0 252 aa4.48□□□□□ -1.69
SSX3-201ENST00000298396 TMEM252Q8N6L7 170 aa4.48□□□□□ -1.69
SSX3-201ENST00000298396 THAP8Q8NA92 274 aa4.48□□□□□ -1.69
SSX3-201ENST00000298396 UBAC2Q8NBM4 344 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms