RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 VDAC2P45880 294 aaPredicted RBP12.78□□□□□ -0.36
FNDC1-201ENST00000297267 ZNF329Q86UD4 541 aa12.78□□□□□ -0.36
FNDC1-201ENST00000297267 CD177Q8N6Q3 437 aa12.78□□□□□ -0.36
FNDC1-201ENST00000297267 UPK2O00526 184 aa12.78□□□□□ -0.36
FNDC1-201ENST00000297267 IGHV1-46P01743 117 aa12.78□□□□□ -0.36
FNDC1-201ENST00000297267 RPS20P60866 119 aaKnown RBP12.78□□□□□ -0.36
FNDC1-201ENST00000297267 CD300EQ496F6 205 aaPredicted RBP12.78□□□□□ -0.36
FNDC1-201ENST00000297267 TMEM200BQ69YZ2 307 aa12.78□□□□□ -0.36
FNDC1-201ENST00000297267 ELOVL5Q9NYP7 299 aa12.78□□□□□ -0.36
FNDC1-201ENST00000297267 CARHSP1Q9Y2V2 147 aaKnown RBP12.78□□□□□ -0.36
FNDC1-201ENST00000297267 PMS2P5A8MQ11 134 aa12.78□□□□□ -0.36
FNDC1-201ENST00000297267 COX5BP10606 129 aa12.78□□□□□ -0.36
FNDC1-201ENST00000297267 LYPD2Q6UXB3 125 aa12.78□□□□□ -0.36
FNDC1-201ENST00000297267 MED12Q93074 2177 aa12.77□□□□□ -0.36
FNDC1-201ENST00000297267 SEPSECSQ9HD40 501 aaKnown RBP12.77□□□□□ -0.36
FNDC1-201ENST00000297267 TRBV6-7A0A0A0MS04 114 aa12.77□□□□□ -0.36
FNDC1-201ENST00000297267 TRBV7-9A0A0J9YWB2 115 aa12.77□□□□□ -0.36
FNDC1-201ENST00000297267 C15orf61A6NNL5 157 aa12.77□□□□□ -0.36
FNDC1-201ENST00000297267 PSPNO60542 156 aa12.77□□□□□ -0.36
FNDC1-201ENST00000297267 C20orf204Q6ZNR8 217 aa12.77□□□□□ -0.36
FNDC1-201ENST00000297267 OR11H12B2RN74 326 aa12.77□□□□□ -0.37
FNDC1-201ENST00000297267 SRSF7Q16629 238 aaKnown RBP eCLIP12.77□□□□□ -0.37
FNDC1-201ENST00000297267 MRPL14Q6P1L8 145 aaKnown RBP12.77□□□□□ -0.37
FNDC1-201ENST00000297267 FAM89BQ8N5H3 189 aa12.77□□□□□ -0.37
FNDC1-201ENST00000297267 OR11H1Q8NG94 326 aa12.77□□□□□ -0.37
FNDC1-201ENST00000297267 OR11H2Q8NH07 326 aa12.77□□□□□ -0.37
FNDC1-201ENST00000297267 MGST2Q99735 147 aa12.77□□□□□ -0.37
FNDC1-201ENST00000297267 CHRNA10Q9GZZ6 450 aa12.77□□□□□ -0.37
FNDC1-201ENST00000297267 TRAV8-1A0A0A6YYK1 113 aa12.77□□□□□ -0.37
FNDC1-201ENST00000297267 DNAL4O96015 105 aa12.77□□□□□ -0.37
FNDC1-201ENST00000297267 PSMG4Q5JS54 123 aa12.77□□□□□ -0.37
FNDC1-201ENST00000297267 GLRX5Q86SX6 157 aa12.77□□□□□ -0.37
FNDC1-201ENST00000297267 C10orf126Q8N4M7 172 aa12.77□□□□□ -0.37
FNDC1-201ENST00000297267 ZIC4Q8N9L1 334 aa12.77□□□□□ -0.37
FNDC1-201ENST00000297267 VWA8A3KMH1 1905 aa12.77□□□□□ -0.37
FNDC1-201ENST00000297267 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.77□□□□□ -0.37
FNDC1-201ENST00000297267 GAS1P54826 345 aa12.77□□□□□ -0.37
FNDC1-201ENST00000297267 LINC00479Q96M42 142 aa12.77□□□□□ -0.37
FNDC1-201ENST00000297267 PSMG3Q9BT73 122 aaPredicted RBP12.77□□□□□ -0.37
FNDC1-201ENST00000297267 MALP21145 153 aa12.76□□□□□ -0.37
FNDC1-201ENST00000297267 PRDM13Q9H4Q3 707 aa12.76□□□□□ -0.37
FNDC1-201ENST00000297267 HOXA5P20719 270 aa12.76□□□□□ -0.37
FNDC1-201ENST00000297267 CNTFRP26992 372 aa12.76□□□□□ -0.37
FNDC1-201ENST00000297267 GPX4P36969 197 aaPredicted RBP12.76□□□□□ -0.37
FNDC1-201ENST00000297267 CFHR3Q02985 330 aa12.76□□□□□ -0.37
FNDC1-201ENST00000297267 TMEM249Q2WGJ8 235 aa12.76□□□□□ -0.37
FNDC1-201ENST00000297267 NBR2O15453 112 aa12.76□□□□□ -0.37
FNDC1-201ENST00000297267 TRPM7Q96QT4 1865 aa12.76□□□□□ -0.37
FNDC1-201ENST00000297267 PRR30Q53SZ7 412 aaPredicted RBP12.76□□□□□ -0.37
FNDC1-201ENST00000297267 TMEM256Q8N2U0 113 aa12.76□□□□□ -0.37
FNDC1-201ENST00000297267 TICRRQ7Z2Z1 1910 aa12.75□□□□□ -0.37
FNDC1-201ENST00000297267 NDUFA2O43678 99 aa12.75□□□□□ -0.37
FNDC1-201ENST00000297267 NDUFS6O75380 124 aaKnown RBP12.75□□□□□ -0.37
FNDC1-201ENST00000297267 GGNQ86UU5 652 aa12.75□□□□□ -0.37
FNDC1-201ENST00000297267 LRTM2Q8N967 370 aa12.75□□□□□ -0.37
FNDC1-201ENST00000297267 SLC25A39Q9BZJ4 359 aaPredicted RBP12.75□□□□□ -0.37
FNDC1-201ENST00000297267 EPDR1Q9UM22 224 aa12.75□□□□□ -0.37
FNDC1-201ENST00000297267 ZNF257Q9Y2Q1 563 aa12.75□□□□□ -0.37
FNDC1-201ENST00000297267 A0A087X0K7 114 aa12.75□□□□□ -0.37
FNDC1-201ENST00000297267 C2orf88Q9BSF0 95 aa12.75□□□□□ -0.37
FNDC1-201ENST00000297267 SBF1O95248 1867 aa12.75□□□□□ -0.37
FNDC1-201ENST00000297267 TRAV8-2A0A0B4J237 113 aa12.75□□□□□ -0.37
FNDC1-201ENST00000297267 CEACAM1P13688 526 aa12.75□□□□□ -0.37
FNDC1-201ENST00000297267 RUSC1-AS1Q66K80 236 aa12.75□□□□□ -0.37
FNDC1-201ENST00000297267 UBE2E2Q96LR5 201 aa12.75□□□□□ -0.37
FNDC1-201ENST00000297267 ESPL1Q14674 2120 aa12.74□□□□□ -0.37
FNDC1-201ENST00000297267 TCF20Q9UGU0 1960 aaKnown RBP12.74□□□□□ -0.37
FNDC1-201ENST00000297267 SUPT4H1P63272 117 aaKnown RBP12.74□□□□□ -0.37
FNDC1-201ENST00000297267 DUX4L9Q6RFH8 374 aaPredicted RBP12.74□□□□□ -0.37
FNDC1-201ENST00000297267 PHLDA1Q8WV24 401 aaPredicted RBP12.74□□□□□ -0.37
FNDC1-201ENST00000297267 FOXD3Q9UJU5 478 aaPredicted RBP12.74□□□□□ -0.37
FNDC1-201ENST00000297267 TRBV9A0A0B4J1U6 114 aa12.74□□□□□ -0.37
FNDC1-201ENST00000297267 RNF125Q96EQ8 232 aa12.74□□□□□ -0.37
FNDC1-201ENST00000297267 PEF1Q9UBV8 284 aaKnown RBP12.74□□□□□ -0.37
FNDC1-201ENST00000297267 A0A0G2JRQ6 117 aa12.74□□□□□ -0.37
FNDC1-201ENST00000297267 DOCK9Q9BZ29 2069 aa12.74□□□□□ -0.37
FNDC1-201ENST00000297267 ORMDL3Q8N138 153 aa12.73□□□□□ -0.37
FNDC1-201ENST00000297267 RNF182Q8N6D2 247 aa12.73□□□□□ -0.37
FNDC1-201ENST00000297267 CHTOPQ9Y3Y2 248 aaKnown RBP12.73□□□□□ -0.37
FNDC1-201ENST00000297267 CLDN16Q9Y5I7 305 aa12.73□□□□□ -0.37
FNDC1-201ENST00000297267 SEC16AO15027 2179 aa12.73□□□□□ -0.37
FNDC1-201ENST00000297267 TMEM42Q69YG0 159 aa12.73□□□□□ -0.37
FNDC1-201ENST00000297267 LINC00473A8K010 186 aa12.73□□□□□ -0.37
FNDC1-201ENST00000297267 D6R8Y8 96 aa12.73□□□□□ -0.37
FNDC1-201ENST00000297267 TSPOP30536 169 aa12.73□□□□□ -0.37
FNDC1-201ENST00000297267 TMEM155Q4W5P6 130 aa12.73□□□□□ -0.37
FNDC1-201ENST00000297267 FAM90A1Q86YD7 464 aa12.73□□□□□ -0.37
FNDC1-201ENST00000297267 SPAG8Q99932 426 aaPredicted RBP12.73□□□□□ -0.37
FNDC1-201ENST00000297267 GNLYP22749 145 aa12.73□□□□□ -0.37
FNDC1-201ENST00000297267 PSG8Q9UQ74 426 aa12.73□□□□□ -0.37
FNDC1-201ENST00000297267 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.73□□□□□ -0.37
FNDC1-201ENST00000297267 DUTP33316 252 aaKnown RBP12.73□□□□□ -0.37
FNDC1-201ENST00000297267 MBNL3Q9NUK0 354 aaKnown RBP12.73□□□□□ -0.37
FNDC1-201ENST00000297267 LINC00312Q9Y6C7 94 aa12.73□□□□□ -0.37
FNDC1-201ENST00000297267 TMEM133Q9H2Q1 129 aa12.72□□□□□ -0.37
FNDC1-201ENST00000297267 CYTL1Q9NRR1 136 aa12.72□□□□□ -0.37
FNDC1-201ENST00000297267 TRAV21A0A0B4J279 112 aa12.72□□□□□ -0.37
FNDC1-201ENST00000297267 UCNP55089 124 aa12.72□□□□□ -0.37
FNDC1-201ENST00000297267 MTURNQ8N3F0 131 aa12.72□□□□□ -0.37
FNDC1-201ENST00000297267 NABP1Q96AH0 204 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms