RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 TRAV12-3A0A0B4J271 114 aa12.71□□□□□ -0.38
SHROOM4-201ENST00000289292 WDR83OSQ9Y284 106 aa12.71□□□□□ -0.38
SHROOM4-201ENST00000289292 A0A1B0GW64 132 aa12.71□□□□□ -0.38
SHROOM4-201ENST00000289292 LYNX1G3V0Z9 82 aa12.71□□□□□ -0.38
SHROOM4-201ENST00000289292 LYNX1P0DP58 116 aa12.71□□□□□ -0.38
SHROOM4-201ENST00000289292 PPP1R27Q86WC6 154 aa12.71□□□□□ -0.38
SHROOM4-201ENST00000289292 CIARTQ8N365 385 aaPredicted RBP12.71□□□□□ -0.38
SHROOM4-201ENST00000289292 OR2K2Q8NGT1 345 aa12.71□□□□□ -0.38
SHROOM4-201ENST00000289292 NMSQ5H8A3 153 aa12.7□□□□□ -0.38
SHROOM4-201ENST00000289292 JMJD8Q96S16 334 aa12.7□□□□□ -0.38
SHROOM4-201ENST00000289292 HAX1O00165 279 aa12.7□□□□□ -0.38
SHROOM4-201ENST00000289292 CRIPAKQ8N1N5 446 aa12.7□□□□□ -0.38
SHROOM4-201ENST00000289292 LINC00312Q9Y6C7 94 aa12.7□□□□□ -0.38
SHROOM4-201ENST00000289292 A0A1W2PRE2 83 aa12.7□□□□□ -0.38
SHROOM4-201ENST00000289292 ZNF585BQ52M93 769 aa12.7□□□□□ -0.38
SHROOM4-201ENST00000289292 OR4X2Q8NGF9 303 aa12.7□□□□□ -0.38
SHROOM4-201ENST00000289292 OR5AN1Q8NGI8 311 aa12.7□□□□□ -0.38
SHROOM4-201ENST00000289292 IGLV3-12A0A075B6K2 115 aa12.7□□□□□ -0.38
SHROOM4-201ENST00000289292 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.7□□□□□ -0.38
SHROOM4-201ENST00000289292 NDUFS8O00217 210 aa12.7□□□□□ -0.38
SHROOM4-201ENST00000289292 APOBEC3AP31941 199 aaPredicted RBP12.7□□□□□ -0.38
SHROOM4-201ENST00000289292 VKORC1Q9BQB6 163 aa12.7□□□□□ -0.38
SHROOM4-201ENST00000289292 NCR2O95944 276 aa12.69□□□□□ -0.38
SHROOM4-201ENST00000289292 IGHV3-11P01762 117 aa12.69□□□□□ -0.38
SHROOM4-201ENST00000289292 FHL1Q13642 323 aa12.69□□□□□ -0.38
SHROOM4-201ENST00000289292 IGLV3-32A0A0A0MS00 114 aa12.69□□□□□ -0.38
SHROOM4-201ENST00000289292 IGHV1-18A0A0C4DH31 117 aa12.69□□□□□ -0.38
SHROOM4-201ENST00000289292 DNAL4O96015 105 aa12.69□□□□□ -0.38
SHROOM4-201ENST00000289292 CKS1BP61024 79 aa12.69□□□□□ -0.38
SHROOM4-201ENST00000289292 BEND2Q8NDZ0 799 aa12.69□□□□□ -0.38
SHROOM4-201ENST00000289292 B9A039 149 aa12.69□□□□□ -0.38
SHROOM4-201ENST00000289292 GGNQ86UU5 652 aa12.69□□□□□ -0.38
SHROOM4-201ENST00000289292 COL4A6Q14031 1691 aa12.69□□□□□ -0.38
SHROOM4-201ENST00000289292 IGHV3-64A0A075B6Q5 118 aa12.69□□□□□ -0.38
SHROOM4-201ENST00000289292 EXOC3-AS1Q8N2X6 119 aa12.69□□□□□ -0.38
SHROOM4-201ENST00000289292 PIMREGQ9BSJ6 248 aa12.69□□□□□ -0.38
SHROOM4-201ENST00000289292 PSG8Q9UQ74 426 aa12.69□□□□□ -0.38
SHROOM4-201ENST00000289292 HOXA3O43365 443 aaPredicted RBP12.69□□□□□ -0.38
SHROOM4-201ENST00000289292 PSPNO60542 156 aa12.69□□□□□ -0.38
SHROOM4-201ENST00000289292 LTBRP36941 435 aa12.69□□□□□ -0.38
SHROOM4-201ENST00000289292 MPV17L2Q567V2 206 aa12.69□□□□□ -0.38
SHROOM4-201ENST00000289292 LURAP1LQ8IV03 231 aa12.69□□□□□ -0.38
SHROOM4-201ENST00000289292 TEX29Q8N6K0 151 aa12.69□□□□□ -0.38
SHROOM4-201ENST00000289292 IGKV2-40A0A087WW87 121 aaPredicted RBP12.68□□□□□ -0.38
SHROOM4-201ENST00000289292 IGKV2D-40P01614 121 aaPredicted RBP12.68□□□□□ -0.38
SHROOM4-201ENST00000289292 PRCDQ00LT1 54 aa12.68□□□□□ -0.38
SHROOM4-201ENST00000289292 RAX2Q96IS3 184 aa12.68□□□□□ -0.38
SHROOM4-201ENST00000289292 HBDP02042 147 aa12.68□□□□□ -0.38
SHROOM4-201ENST00000289292 PDLIM4P50479 330 aa12.68□□□□□ -0.38
SHROOM4-201ENST00000289292 TSKUQ8WUA8 353 aa12.68□□□□□ -0.38
SHROOM4-201ENST00000289292 DPM3Q9P2X0 92 aa12.68□□□□□ -0.38
SHROOM4-201ENST00000289292 AGMATQ9BSE5 352 aa12.68□□□□□ -0.38
SHROOM4-201ENST00000289292 GTSF1LQ9H1H1 148 aa12.68□□□□□ -0.38
SHROOM4-201ENST00000289292 IGLV3-19P01714 112 aa12.68□□□□□ -0.38
SHROOM4-201ENST00000289292 CDKN1AP38936 164 aa12.68□□□□□ -0.38
SHROOM4-201ENST00000289292 RALGAPA1Q6GYQ0 2036 aa12.68□□□□□ -0.38
SHROOM4-201ENST00000289292 C3orf79P0CE67 100 aa12.67□□□□□ -0.38
SHROOM4-201ENST00000289292 SNRPD3P62318 126 aaKnown RBP12.67□□□□□ -0.38
SHROOM4-201ENST00000289292 POLR3KQ9Y2Y1 108 aaPredicted RBP12.67□□□□□ -0.38
SHROOM4-201ENST00000289292 MLNRO43193 412 aa12.67□□□□□ -0.38
SHROOM4-201ENST00000289292 STAG3L3P0CL85 134 aa12.67□□□□□ -0.38
SHROOM4-201ENST00000289292 EFEMP2O95967 443 aa12.67□□□□□ -0.38
SHROOM4-201ENST00000289292 LYL1P12980 280 aa12.67□□□□□ -0.38
SHROOM4-201ENST00000289292 ZNF138P52744 262 aa12.67□□□□□ -0.38
SHROOM4-201ENST00000289292 C20orf204Q6ZNR8 217 aa12.67□□□□□ -0.38
SHROOM4-201ENST00000289292 GTSCR1Q86UQ5 136 aa12.67□□□□□ -0.38
SHROOM4-201ENST00000289292 ZNF479Q96JC4 524 aa12.67□□□□□ -0.38
SHROOM4-201ENST00000289292 GP6Q9HCN6 339 aa12.67□□□□□ -0.38
SHROOM4-201ENST00000289292 MOB4Q9Y3A3 225 aa12.67□□□□□ -0.38
SHROOM4-201ENST00000289292 DPM2O94777 84 aa12.66□□□□□ -0.38
SHROOM4-201ENST00000289292 IGKCP01834 107 aa12.66□□□□□ -0.38
SHROOM4-201ENST00000289292 RAB9AP51151 201 aa12.66□□□□□ -0.38
SHROOM4-201ENST00000289292 UBE2V1Q13404 147 aa12.66□□□□□ -0.38
SHROOM4-201ENST00000289292 CHCHD1Q96BP2 118 aaKnown RBP12.66□□□□□ -0.38
SHROOM4-201ENST00000289292 RNF125Q96EQ8 232 aa12.66□□□□□ -0.38
SHROOM4-201ENST00000289292 ST20Q9HBF5 79 aa12.66□□□□□ -0.38
SHROOM4-201ENST00000289292 A0A0G2JLM5 398 aa12.66□□□□□ -0.38
SHROOM4-201ENST00000289292 TMEM262E9PQX1 116 aa12.66□□□□□ -0.38
SHROOM4-201ENST00000289292 SRSF4Q08170 494 aaKnown RBP12.66□□□□□ -0.38
SHROOM4-201ENST00000289292 A8MWP6 167 aa12.66□□□□□ -0.38
SHROOM4-201ENST00000289292 FOXF2Q12947 444 aa12.66□□□□□ -0.38
SHROOM4-201ENST00000289292 TNFRSF18Q9Y5U5 241 aa12.66□□□□□ -0.38
SHROOM4-201ENST00000289292 LINC00473A8K010 186 aa12.66□□□□□ -0.38
SHROOM4-201ENST00000289292 C17orf100A8MU93 164 aa12.66□□□□□ -0.38
SHROOM4-201ENST00000289292 NTF4P34130 210 aa12.66□□□□□ -0.38
SHROOM4-201ENST00000289292 RSPO3Q9BXY4 272 aaPredicted RBP12.66□□□□□ -0.38
SHROOM4-201ENST00000289292 A0A1B0GW15 77 aa12.66□□□□□ -0.38
SHROOM4-201ENST00000289292 SRD5A1P18405 259 aa12.66□□□□□ -0.38
SHROOM4-201ENST00000289292 C1orf162Q8NEQ5 155 aaPredicted RBP12.66□□□□□ -0.38
SHROOM4-201ENST00000289292 TRAV1-1A0A0B4J248 108 aa12.65□□□□□ -0.38
SHROOM4-201ENST00000289292 CD177Q8N6Q3 437 aa12.65□□□□□ -0.38
SHROOM4-201ENST00000289292 SCRT1Q9BWW7 348 aa12.65□□□□□ -0.38
SHROOM4-201ENST00000289292 HSD52Q0P140 79 aa12.65□□□□□ -0.38
SHROOM4-201ENST00000289292 FAM90A2PQ658T7 463 aa12.65□□□□□ -0.38
SHROOM4-201ENST00000289292 Q6AWC8 147 aa12.65□□□□□ -0.38
SHROOM4-201ENST00000289292 MRPS18CQ9Y3D5 142 aaKnown RBP12.65□□□□□ -0.38
SHROOM4-201ENST00000289292 PLXNA3P51805 1871 aa12.65□□□□□ -0.38
SHROOM4-201ENST00000289292 VWA8A3KMH1 1905 aa12.65□□□□□ -0.38
SHROOM4-201ENST00000289292 GAGE13Q4V321 117 aa12.65□□□□□ -0.38
SHROOM4-201ENST00000289292 NUP37Q8NFH4 326 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms