RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 J3QLI3 93 aa16.6■□□□□ 0.25
YBX3-202ENST00000279550 OR2C1O95371 312 aa16.6■□□□□ 0.25
YBX3-202ENST00000279550 CNIH1O95406 144 aa16.6■□□□□ 0.25
YBX3-202ENST00000279550 CRYBA1P05813 215 aa16.6■□□□□ 0.25
YBX3-202ENST00000279550 PIP4P2Q8N4L2 257 aa16.6■□□□□ 0.25
YBX3-202ENST00000279550 OR51G1Q8NGK1 321 aa16.6■□□□□ 0.25
YBX3-202ENST00000279550 ZNF469Q96JG9 3925 aaPredicted RBP16.6■□□□□ 0.25
YBX3-202ENST00000279550 CELSR1Q9NYQ6 3014 aa16.6■□□□□ 0.25
YBX3-202ENST00000279550 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.6■□□□□ 0.251e-6■■■■□ 20.6
YBX3-202ENST00000279550 IGHV1-69DA0A0B4J2H0 117 aa16.59■□□□□ 0.25
YBX3-202ENST00000279550 AVPP01185 164 aa16.59■□□□□ 0.25
YBX3-202ENST00000279550 IGHV1-69P01742 117 aa16.59■□□□□ 0.25
YBX3-202ENST00000279550 EBI3Q14213 229 aa16.59■□□□□ 0.25
YBX3-202ENST00000279550 FAM120AOSQ5T036 256 aa16.59■□□□□ 0.25
YBX3-202ENST00000279550 MORN5Q5VZ52 161 aa16.59■□□□□ 0.25
YBX3-202ENST00000279550 MALSU1Q96EH3 234 aa16.59■□□□□ 0.25
YBX3-202ENST00000279550 DOK5Q9P104 306 aa16.59■□□□□ 0.25
YBX3-202ENST00000279550 NAT8Q9UHE5 227 aa16.59■□□□□ 0.25
YBX3-202ENST00000279550 MT-CO2P00403 227 aa16.59■□□□□ 0.25
YBX3-202ENST00000279550 FXYD3Q14802 87 aa16.59■□□□□ 0.25
YBX3-202ENST00000279550 ETFRF1Q6IPR1 90 aa16.59■□□□□ 0.25
YBX3-202ENST00000279550 PATE2Q6UY27 113 aa16.59■□□□□ 0.25
YBX3-202ENST00000279550 FAM24BQ8N5W8 94 aa16.59■□□□□ 0.25
YBX3-202ENST00000279550 FAM103A1Q9BTL3 118 aaKnown RBP16.59■□□□□ 0.25
YBX3-202ENST00000279550 IGHV3OR16-10A0A075B7F0 116 aa16.58■□□□□ 0.24
YBX3-202ENST00000279550 IGHV4-38-2P0DP08 117 aa16.58■□□□□ 0.24
YBX3-202ENST00000279550 PNRC1Q12796 327 aaPredicted RBP16.58■□□□□ 0.24
YBX3-202ENST00000279550 TMEM241Q24JQ0 296 aa16.58■□□□□ 0.24
YBX3-202ENST00000279550 CYB5R2Q6BCY4 276 aa16.58■□□□□ 0.24
YBX3-202ENST00000279550 SRSF8Q9BRL6 282 aaKnown RBP16.58■□□□□ 0.24
YBX3-202ENST00000279550 WNT10AQ9GZT5 417 aa16.58■□□□□ 0.24
YBX3-202ENST00000279550 TECRQ9NZ01 308 aaKnown RBP16.58■□□□□ 0.24
YBX3-202ENST00000279550 TRAV5A0A0B4J249 113 aa16.57■□□□□ 0.24
YBX3-202ENST00000279550 NANPQ8TBE9 248 aa16.57■□□□□ 0.24
YBX3-202ENST00000279550 C19orf24Q9BVV8 132 aa16.57■□□□□ 0.24
YBX3-202ENST00000279550 GSX1Q9H4S2 264 aaPredicted RBP16.57■□□□□ 0.24
YBX3-202ENST00000279550 TNFRSF19Q9NS68 423 aa16.57■□□□□ 0.24
YBX3-202ENST00000279550 CCDC168Q8NDH2 2452 aa16.57■□□□□ 0.24
YBX3-202ENST00000279550 AKAP9Q99996 3911 aa16.57■□□□□ 0.24
YBX3-202ENST00000279550 B4DEV8 164 aa16.56■□□□□ 0.24
YBX3-202ENST00000279550 I3L2K1 104 aa16.56■□□□□ 0.24
YBX3-202ENST00000279550 PDE6DO43924 150 aa16.56■□□□□ 0.24
YBX3-202ENST00000279550 MT-ND4LP03901 98 aa16.56■□□□□ 0.24
YBX3-202ENST00000279550 CTRB1P17538 263 aa16.56■□□□□ 0.24
YBX3-202ENST00000279550 RPL23P62829 140 aaKnown RBP16.56■□□□□ 0.24
YBX3-202ENST00000279550 NDPQ00604 133 aa16.56■□□□□ 0.24
YBX3-202ENST00000279550 ADIRFQ15847 76 aa16.56■□□□□ 0.24
YBX3-202ENST00000279550 CTRB2Q6GPI1 263 aa16.56■□□□□ 0.24
YBX3-202ENST00000279550 ZNF343Q6P1L6 599 aa16.56■□□□□ 0.24
YBX3-202ENST00000279550 BRD3OSQ6XYD6 125 aa16.56■□□□□ 0.24
YBX3-202ENST00000279550 FAM167A-AS1Q96KT0 104 aa16.56■□□□□ 0.24
YBX3-202ENST00000279550 DERL1Q9BUN8 251 aa16.56■□□□□ 0.24
YBX3-202ENST00000279550 F6UZH7 168 aa16.56■□□□□ 0.24
YBX3-202ENST00000279550 TMEM11P17152 192 aa16.56■□□□□ 0.24
YBX3-202ENST00000279550 KLF17Q5JT82 389 aaPredicted RBP16.56■□□□□ 0.24
YBX3-202ENST00000279550 TMEM116Q8NCL8 245 aa16.56■□□□□ 0.24
YBX3-202ENST00000279550 OR4X1Q8NH49 305 aa16.56■□□□□ 0.24
YBX3-202ENST00000279550 SSX3Q99909 188 aa16.56■□□□□ 0.24
YBX3-202ENST00000279550 SLC25A2Q9BXI2 301 aa16.56■□□□□ 0.24
YBX3-202ENST00000279550 DNAJC4Q9NNZ3 241 aa16.56■□□□□ 0.24
YBX3-202ENST00000279550 SCO2A0A1W2PP80 73 aa16.55■□□□□ 0.24
YBX3-202ENST00000279550 NCBP2LA6PVI3 153 aaKnown RBP16.55■□□□□ 0.24
YBX3-202ENST00000279550 CORTO00230 105 aa16.55■□□□□ 0.24
YBX3-202ENST00000279550 SMAD7O15105 426 aaKnown RBP16.55■□□□□ 0.24
YBX3-202ENST00000279550 COX7A2P2O60397 106 aa16.55■□□□□ 0.24
YBX3-202ENST00000279550 CLN5O75503 358 aa16.55■□□□□ 0.24
YBX3-202ENST00000279550 NDUFB4O95168 129 aa16.55■□□□□ 0.24
YBX3-202ENST00000279550 FOLR2P14207 255 aa16.55■□□□□ 0.24
YBX3-202ENST00000279550 CX3CL1P78423 397 aa16.55■□□□□ 0.24
YBX3-202ENST00000279550 ASPHD1Q5U4P2 390 aa16.55■□□□□ 0.24
YBX3-202ENST00000279550 TRGV9Q99603 122 aa16.55■□□□□ 0.24
YBX3-202ENST00000279550 MRPL32Q9BYC8 188 aaKnown RBP16.55■□□□□ 0.24
YBX3-202ENST00000279550 CREBBPQ92793 2442 aa16.54■□□□□ 0.24
YBX3-202ENST00000279550 C8orf88P0DMB2 117 aa16.54■□□□□ 0.24
YBX3-202ENST00000279550 SELENOTP62341 195 aa16.54■□□□□ 0.24
YBX3-202ENST00000279550 RNF212Q495C1 297 aa16.54■□□□□ 0.24
YBX3-202ENST00000279550 ZANQ9Y493 2812 aa16.54■□□□□ 0.24
YBX3-202ENST00000279550 OR7C2O60412 319 aa16.53■□□□□ 0.24
YBX3-202ENST00000279550 RAB5AP20339 215 aa16.53■□□□□ 0.24
YBX3-202ENST00000279550 C10orf113Q5VZT2 155 aa16.53■□□□□ 0.24
YBX3-202ENST00000279550 UHRF2Q96PU4 802 aa16.53■□□□□ 0.24
YBX3-202ENST00000279550 MLXQ9UH92 298 aa16.53■□□□□ 0.24
YBX3-202ENST00000279550 OR10J4P0C629 311 aa16.53■□□□□ 0.24
YBX3-202ENST00000279550 OR1L4Q8NGR5 311 aa16.53■□□□□ 0.24
YBX3-202ENST00000279550 Q8WTZ3 238 aa16.53■□□□□ 0.24
YBX3-202ENST00000279550 C22orf15Q8WYQ4 148 aa16.53■□□□□ 0.24
YBX3-202ENST00000279550 ARPC1AQ92747 370 aa16.53■□□□□ 0.24
YBX3-202ENST00000279550 RNF2Q99496 336 aa16.53■□□□□ 0.24
YBX3-202ENST00000279550 TXNDC17Q9BRA2 123 aa16.53■□□□□ 0.24
YBX3-202ENST00000279550 TMEM167BQ9NRX6 74 aa16.53■□□□□ 0.24
YBX3-202ENST00000279550 ITPR3Q14573 2671 aa16.53■□□□□ 0.24
YBX3-202ENST00000279550 K7EIM0 57 aa16.52■□□□□ 0.24
YBX3-202ENST00000279550 TAS2R45P59539 299 aa16.52■□□□□ 0.24
YBX3-202ENST00000279550 FLI1Q01543 452 aaPredicted RBP16.52■□□□□ 0.24
YBX3-202ENST00000279550 ELOBQ15370 118 aa16.52■□□□□ 0.24
YBX3-202ENST00000279550 ZNF562Q6V9R5 426 aa16.52■□□□□ 0.24
YBX3-202ENST00000279550 PQLC2Q6ZP29 291 aa16.52■□□□□ 0.24
YBX3-202ENST00000279550 ZFP82Q8N141 532 aa16.52■□□□□ 0.24
YBX3-202ENST00000279550 Q8N9W7 124 aa16.52■□□□□ 0.24
YBX3-202ENST00000279550 ZNF355PQ9NSJ1 428 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms