RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 Q8TCH9 128 aa11.49□□□□□ -0.57
TUBGCP3-201ENST00000261965 LOXL4Q96JB6 756 aa11.49□□□□□ -0.57
TUBGCP3-201ENST00000261965 NKX6-3A6NJ46 265 aa11.49□□□□□ -0.57
TUBGCP3-201ENST00000261965 AHRRA9YTQ3 701 aa11.49□□□□□ -0.57
TUBGCP3-201ENST00000261965 MT-ND6P03923 174 aa11.49□□□□□ -0.57
TUBGCP3-201ENST00000261965 CD59P13987 128 aa11.49□□□□□ -0.57
TUBGCP3-201ENST00000261965 BTF3P20290 206 aaKnown RBP11.49□□□□□ -0.57
TUBGCP3-201ENST00000261965 SLC25A34Q6PIV7 304 aa11.49□□□□□ -0.57
TUBGCP3-201ENST00000261965 RPRMLQ8N4K4 120 aa11.49□□□□□ -0.57
TUBGCP3-201ENST00000261965 TMEM210A6NLX4 147 aa11.49□□□□□ -0.57
TUBGCP3-201ENST00000261965 PRSS1P07477 247 aa11.49□□□□□ -0.57
TUBGCP3-201ENST00000261965 KIR2DL2P43627 348 aaPredicted RBP11.49□□□□□ -0.57
TUBGCP3-201ENST00000261965 TNFRSF19Q9NS68 423 aa11.49□□□□□ -0.57
TUBGCP3-201ENST00000261965 PRNDQ9UKY0 176 aa11.49□□□□□ -0.57
TUBGCP3-201ENST00000261965 SONP18583 2426 aaKnown RBP11.48□□□□□ -0.57
TUBGCP3-201ENST00000261965 IGKV1D-17A0A075B6S4 117 aa11.48□□□□□ -0.57
TUBGCP3-201ENST00000261965 GAGE10A6NGK3 116 aa11.48□□□□□ -0.57
TUBGCP3-201ENST00000261965 FAM87AP0C7U9 286 aa11.48□□□□□ -0.57
TUBGCP3-201ENST00000261965 LGALS4P56470 323 aa11.48□□□□□ -0.57
TUBGCP3-201ENST00000261965 FBLN7Q53RD9 439 aa11.48□□□□□ -0.57
TUBGCP3-201ENST00000261965 BPIFA4PQ86YQ2 179 aa11.48□□□□□ -0.57
TUBGCP3-201ENST00000261965 GUCD1Q96NT3 240 aa11.48□□□□□ -0.57
TUBGCP3-201ENST00000261965 TMEM70Q9BUB7 260 aa11.48□□□□□ -0.57
TUBGCP3-201ENST00000261965 RAB9BQ9NP90 201 aa11.48□□□□□ -0.57
TUBGCP3-201ENST00000261965 S100A7AQ86SG5 101 aa11.48□□□□□ -0.57
TUBGCP3-201ENST00000261965 DEFB124Q8NES8 71 aa11.48□□□□□ -0.57
TUBGCP3-201ENST00000261965 IGF2RP11717 2491 aa11.48□□□□□ -0.57
TUBGCP3-201ENST00000261965 IGHV2OR16-5A0A0B4J2B6 119 aa11.48□□□□□ -0.57
TUBGCP3-201ENST00000261965 TDGF1P13385 188 aa11.48□□□□□ -0.57
TUBGCP3-201ENST00000261965 OR1L8Q8NGR8 309 aa11.48□□□□□ -0.57
TUBGCP3-201ENST00000261965 OR52E5Q8NH55 327 aa11.48□□□□□ -0.57
TUBGCP3-201ENST00000261965 ZNF71Q9NQZ8 489 aaPredicted RBP11.48□□□□□ -0.57
TUBGCP3-201ENST00000261965 ZFP30Q9Y2G7 519 aa11.48□□□□□ -0.57
TUBGCP3-201ENST00000261965 OTOGLQ3ZCN5 2332 aa11.47□□□□□ -0.57
TUBGCP3-201ENST00000261965 CEACAM8P31997 349 aaPredicted RBP11.47□□□□□ -0.57
TUBGCP3-201ENST00000261965 MSMPQ1L6U9 139 aa11.47□□□□□ -0.57
TUBGCP3-201ENST00000261965 BHLHA15Q7RTS1 189 aaPredicted RBP11.47□□□□□ -0.57
TUBGCP3-201ENST00000261965 WDR31Q8NA23 367 aa11.47□□□□□ -0.57
TUBGCP3-201ENST00000261965 RNASE8Q8TDE3 154 aaKnown RBP11.47□□□□□ -0.57
TUBGCP3-201ENST00000261965 TNRC6AQ8NDV7 1962 aaKnown RBP11.47□□□□□ -0.57
TUBGCP3-201ENST00000261965 NCBP2LA6PVI3 153 aaKnown RBP11.47□□□□□ -0.57
TUBGCP3-201ENST00000261965 IGHV3-23P01764 117 aa11.47□□□□□ -0.57
TUBGCP3-201ENST00000261965 PSG1P11464 419 aa11.47□□□□□ -0.57
TUBGCP3-201ENST00000261965 RPL11P62913 178 aaKnown RBP11.47□□□□□ -0.57
TUBGCP3-201ENST00000261965 TBR1Q16650 682 aa11.47□□□□□ -0.57
TUBGCP3-201ENST00000261965 C1orf229Q6ZS94 237 aaPredicted RBP11.47□□□□□ -0.57
TUBGCP3-201ENST00000261965 TSKUQ8WUA8 353 aa11.47□□□□□ -0.57
TUBGCP3-201ENST00000261965 IGHV1-18A0A0C4DH31 117 aa11.47□□□□□ -0.57
TUBGCP3-201ENST00000261965 SAA1P0DJI8 122 aaPredicted RBP11.47□□□□□ -0.57
TUBGCP3-201ENST00000261965 TPTE2P1Q5T6R2 138 aa11.47□□□□□ -0.57
TUBGCP3-201ENST00000261965 NIT1Q86X76 327 aa11.47□□□□□ -0.57
TUBGCP3-201ENST00000261965 SMG1Q96Q15 3661 aaKnown RBP11.47□□□□□ -0.57
TUBGCP3-201ENST00000261965 MRPL20Q9BYC9 149 aaKnown RBP11.47□□□□□ -0.57
TUBGCP3-201ENST00000261965 FAM208BQ5VWN6 2430 aa11.46□□□□□ -0.57
TUBGCP3-201ENST00000261965 CDX4O14627 284 aaPredicted RBP11.46□□□□□ -0.57
TUBGCP3-201ENST00000261965 TSPOP30536 169 aa11.46□□□□□ -0.57
TUBGCP3-201ENST00000261965 FAM27E3Q08E93 113 aa11.46□□□□□ -0.57
TUBGCP3-201ENST00000261965 RNF7Q9UBF6 113 aa11.46□□□□□ -0.57
TUBGCP3-201ENST00000261965 PTPRQQ9UMZ3 2332 aa11.46□□□□□ -0.57
TUBGCP3-201ENST00000261965 NCOR2Q9Y618 2525 aa11.46□□□□□ -0.57
TUBGCP3-201ENST00000261965 VSTM5A8MXK1 200 aa11.46□□□□□ -0.57
TUBGCP3-201ENST00000261965 GCSHP23434 173 aa11.46□□□□□ -0.57
TUBGCP3-201ENST00000261965 GCSAMQ8N6F7 178 aa11.46□□□□□ -0.57
TUBGCP3-201ENST00000261965 OR2T8A6NH00 312 aa11.46□□□□□ -0.58
TUBGCP3-201ENST00000261965 NUDT10Q8NFP7 164 aa11.46□□□□□ -0.58
TUBGCP3-201ENST00000261965 NUDT11Q96G61 164 aa11.46□□□□□ -0.58
TUBGCP3-201ENST00000261965 SPRY4Q9C004 299 aa11.46□□□□□ -0.58
TUBGCP3-201ENST00000261965 SLC25A10Q9UBX3 287 aaPredicted RBP11.46□□□□□ -0.58
TUBGCP3-201ENST00000261965 IGHV3-49A0A0A0MS15 119 aa11.45□□□□□ -0.58
TUBGCP3-201ENST00000261965 RPL15P61313 204 aaKnown RBP11.45□□□□□ -0.58
TUBGCP3-201ENST00000261965 Q5PR19 223 aa11.45□□□□□ -0.58
TUBGCP3-201ENST00000261965 IGFBPL1Q8WX77 278 aa11.45□□□□□ -0.58
TUBGCP3-201ENST00000261965 KLK15Q9H2R5 256 aa11.45□□□□□ -0.58
TUBGCP3-201ENST00000261965 MYO9AB2RTY4 2548 aa11.45□□□□□ -0.58
TUBGCP3-201ENST00000261965 PEX7O00628 323 aa11.45□□□□□ -0.58
TUBGCP3-201ENST00000261965 MMP23AO75900 390 aa11.45□□□□□ -0.58
TUBGCP3-201ENST00000261965 VMA21Q3ZAQ7 101 aa11.45□□□□□ -0.58
TUBGCP3-201ENST00000261965 C5orf17Q8NAS9 161 aa11.45□□□□□ -0.58
TUBGCP3-201ENST00000261965 RNF114Q9Y508 228 aa11.45□□□□□ -0.58
TUBGCP3-201ENST00000261965 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.45□□□□□ -0.58
TUBGCP3-201ENST00000261965 A8MWL6 223 aa11.45□□□□□ -0.58
TUBGCP3-201ENST00000261965 GGTLC3B5MD39 225 aa11.45□□□□□ -0.58
TUBGCP3-201ENST00000261965 NDUFB3O43676 98 aa11.45□□□□□ -0.58
TUBGCP3-201ENST00000261965 ORM1P02763 201 aa11.45□□□□□ -0.58
TUBGCP3-201ENST00000261965 SFTPCP11686 197 aa11.45□□□□□ -0.58
TUBGCP3-201ENST00000261965 TRIP6Q15654 476 aaKnown RBP11.45□□□□□ -0.58
TUBGCP3-201ENST00000261965 NBEAP1P0C6P0 100 aa11.44□□□□□ -0.58
TUBGCP3-201ENST00000261965 SP9P0CG40 484 aa11.44□□□□□ -0.58
TUBGCP3-201ENST00000261965 WT1P19544 449 aaPredicted RBP11.44□□□□□ -0.58
TUBGCP3-201ENST00000261965 GTF2H5Q6ZYL4 71 aa11.44□□□□□ -0.58
TUBGCP3-201ENST00000261965 ARL6IP6Q8N6S5 226 aa11.44□□□□□ -0.58
TUBGCP3-201ENST00000261965 C15orf65H3BRN8 121 aa11.44□□□□□ -0.58
TUBGCP3-201ENST00000261965 PPIFP30405 207 aaKnown RBP11.44□□□□□ -0.58
TUBGCP3-201ENST00000261965 ARF6P62330 175 aa11.44□□□□□ -0.58
TUBGCP3-201ENST00000261965 SMIM15Q7Z3B0 74 aa11.44□□□□□ -0.58
TUBGCP3-201ENST00000261965 EXOC3-AS1Q8N2X6 119 aa11.44□□□□□ -0.58
TUBGCP3-201ENST00000261965 CIARTQ8N365 385 aaPredicted RBP11.44□□□□□ -0.58
TUBGCP3-201ENST00000261965 PYGO2Q9BRQ0 406 aa11.44□□□□□ -0.58
TUBGCP3-201ENST00000261965 UFC1Q9Y3C8 167 aa11.44□□□□□ -0.58
TUBGCP3-201ENST00000261965 H3BUT2 72 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms