RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 HTN3P15516 51 aa11.4□□□□□ -0.58
CDH1-201ENST00000261769 CENPWQ5EE01 88 aa11.4□□□□□ -0.58
CDH1-201ENST00000261769 Q6ZR03 302 aa11.4□□□□□ -0.58
CDH1-201ENST00000261769 LHFPL1Q86WI0 220 aa11.4□□□□□ -0.58
CDH1-201ENST00000261769 KIAA2026Q5HYC2 2103 aa11.4□□□□□ -0.58
CDH1-201ENST00000261769 SRSF8Q9BRL6 282 aaKnown RBP11.4□□□□□ -0.58
CDH1-201ENST00000261769 PARLQ9H300 379 aa11.4□□□□□ -0.58
CDH1-201ENST00000261769 A0A1B0GWJ7 208 aa11.4□□□□□ -0.58
CDH1-201ENST00000261769 FAM223BA6NKX1 122 aa11.4□□□□□ -0.58
CDH1-201ENST00000261769 FAM223AQ8IWN6 122 aa11.4□□□□□ -0.58
CDH1-201ENST00000261769 TMEM190Q8WZ59 177 aa11.4□□□□□ -0.58
CDH1-201ENST00000261769 FMC1Q96HJ9 113 aa11.4□□□□□ -0.58
CDH1-201ENST00000261769 ASCL2Q99929 193 aa11.4□□□□□ -0.58
CDH1-201ENST00000261769 MIEN1Q9BRT3 115 aa11.4□□□□□ -0.58
CDH1-201ENST00000261769 Q9H3A6 140 aa11.4□□□□□ -0.58
CDH1-201ENST00000261769 LOC389332A0A1B0GUA5 103 aa11.4□□□□□ -0.59
CDH1-201ENST00000261769 EIF3GO75821 320 aaKnown RBP eCLIP11.4□□□□□ -0.59
CDH1-201ENST00000261769 OR10W1Q8NGF6 305 aa11.4□□□□□ -0.59
CDH1-201ENST00000261769 TNFRSF18Q9Y5U5 241 aa11.4□□□□□ -0.59
CDH1-201ENST00000261769 OVOL1O14753 267 aa11.39□□□□□ -0.59
CDH1-201ENST00000261769 SCGB1C2P0DMR2 95 aa11.39□□□□□ -0.59
CDH1-201ENST00000261769 RPL13AP40429 203 aaKnown RBP11.39□□□□□ -0.59
CDH1-201ENST00000261769 LCNL1Q6ZST4 164 aa11.39□□□□□ -0.59
CDH1-201ENST00000261769 BTF3P20290 206 aaKnown RBP11.39□□□□□ -0.59
CDH1-201ENST00000261769 EMP1P54849 157 aa11.39□□□□□ -0.59
CDH1-201ENST00000261769 MIR17HGQ75NE6 70 aa11.39□□□□□ -0.59
CDH1-201ENST00000261769 OR8A1Q8NGG7 326 aa11.39□□□□□ -0.59
CDH1-201ENST00000261769 OR10D4PQ8NGN7 298 aa11.39□□□□□ -0.59
CDH1-201ENST00000261769 ZNF383Q8NA42 475 aa11.39□□□□□ -0.59
CDH1-201ENST00000261769 C12orf57Q99622 126 aa11.39□□□□□ -0.59
CDH1-201ENST00000261769 A0A1W2PNU3 283 aaPredicted RBP11.38□□□□□ -0.59
CDH1-201ENST00000261769 HNRNPA3P51991 378 aaKnown RBP11.38□□□□□ -0.59
CDH1-201ENST00000261769 TMEM183BQ1AE95 376 aa11.38□□□□□ -0.59
CDH1-201ENST00000261769 DEFB113Q30KQ7 82 aa11.38□□□□□ -0.59
CDH1-201ENST00000261769 TEX36Q5VZQ5 186 aa11.38□□□□□ -0.59
CDH1-201ENST00000261769 AP5S1Q9NUS5 200 aa11.38□□□□□ -0.59
CDH1-201ENST00000261769 WDR83OSQ9Y284 106 aa11.38□□□□□ -0.59
CDH1-201ENST00000261769 VENTXO95231 258 aa11.38□□□□□ -0.59
CDH1-201ENST00000261769 TAS2R60P59551 318 aa11.38□□□□□ -0.59
CDH1-201ENST00000261769 DEFB121Q5J5C9 76 aa11.38□□□□□ -0.59
CDH1-201ENST00000261769 ZNF329Q86UD4 541 aa11.38□□□□□ -0.59
CDH1-201ENST00000261769 TMEM262E9PQX1 116 aa11.38□□□□□ -0.59
CDH1-201ENST00000261769 M0R381 172 aa11.38□□□□□ -0.59
CDH1-201ENST00000261769 MALRD1Q5VYJ5 2156 aa11.38□□□□□ -0.59
CDH1-201ENST00000261769 HELZP42694 1942 aaKnown RBP11.38□□□□□ -0.59
CDH1-201ENST00000261769 MPTX1A8MV57 137 aa11.38□□□□□ -0.59
CDH1-201ENST00000261769 RNF224P0DH78 156 aa11.38□□□□□ -0.59
CDH1-201ENST00000261769 SIGLEC15Q6ZMC9 328 aa11.38□□□□□ -0.59
CDH1-201ENST00000261769 F11RQ9Y624 299 aaKnown RBP11.38□□□□□ -0.59
CDH1-201ENST00000261769 RNASE4P34096 147 aaKnown RBP11.37□□□□□ -0.59
CDH1-201ENST00000261769 FABP5P3A8MUU1 101 aa11.37□□□□□ -0.59
CDH1-201ENST00000261769 NUDT3O95989 172 aa11.37□□□□□ -0.59
CDH1-201ENST00000261769 Q5BKY6 102 aa11.37□□□□□ -0.59
CDH1-201ENST00000261769 RUSC1-AS1Q66K80 236 aa11.37□□□□□ -0.59
CDH1-201ENST00000261769 Q6AWC8 147 aa11.37□□□□□ -0.59
CDH1-201ENST00000261769 ZNF562Q6V9R5 426 aa11.37□□□□□ -0.59
CDH1-201ENST00000261769 OR11H4Q8NGC9 324 aa11.37□□□□□ -0.59
CDH1-201ENST00000261769 RNF138Q8WVD3 245 aa11.37□□□□□ -0.59
CDH1-201ENST00000261769 NEU1Q99519 415 aa11.37□□□□□ -0.59
CDH1-201ENST00000261769 SPOCK3Q9BQ16 436 aa11.37□□□□□ -0.59
CDH1-201ENST00000261769 ANKHD1Q8IWZ3 2542 aaKnown RBP11.37□□□□□ -0.59
CDH1-201ENST00000261769 DKK1O94907 266 aa11.37□□□□□ -0.59
CDH1-201ENST00000261769 SOD3P08294 240 aa11.37□□□□□ -0.59
CDH1-201ENST00000261769 QRFPP83859 136 aa11.37□□□□□ -0.59
CDH1-201ENST00000261769 ZNF506Q5JVG8 444 aa11.37□□□□□ -0.59
CDH1-201ENST00000261769 C2orf16Q68DN1 1984 aa11.37□□□□□ -0.59
CDH1-201ENST00000261769 SCN8AQ9UQD0 1980 aa11.37□□□□□ -0.59
CDH1-201ENST00000261769 LOXP28300 417 aaPredicted RBP11.36□□□□□ -0.59
CDH1-201ENST00000261769 FHITP49789 147 aa11.36□□□□□ -0.59
CDH1-201ENST00000261769 KIR3DL3Q8N743 410 aa11.36□□□□□ -0.59
CDH1-201ENST00000261769 HEATR5AQ86XA9 2040 aa11.36□□□□□ -0.59
CDH1-201ENST00000261769 TRAV34A0A0B4J273 112 aa11.36□□□□□ -0.59
CDH1-201ENST00000261769 TRAV21A0A0B4J279 112 aa11.36□□□□□ -0.59
CDH1-201ENST00000261769 TCF21O43680 179 aa11.36□□□□□ -0.59
CDH1-201ENST00000261769 CBLN2Q8IUK8 224 aa11.36□□□□□ -0.59
CDH1-201ENST00000261769 DPH3Q96FX2 82 aa11.36□□□□□ -0.59
CDH1-201ENST00000261769 KAAG1Q9UBP8 84 aa11.36□□□□□ -0.59
CDH1-201ENST00000261769 PEF1Q9UBV8 284 aaKnown RBP11.36□□□□□ -0.59
CDH1-201ENST00000261769 PTPN13Q12923 2485 aa11.36□□□□□ -0.59
CDH1-201ENST00000261769 PSMG4Q5JS54 123 aa11.36□□□□□ -0.59
CDH1-201ENST00000261769 SHISA9B4DS77 424 aa11.36□□□□□ -0.59
CDH1-201ENST00000261769 GRNP28799 593 aaKnown RBP11.36□□□□□ -0.59
CDH1-201ENST00000261769 LYRM7Q5U5X0 104 aa11.36□□□□□ -0.59
CDH1-201ENST00000261769 TRBV20OR9-2A0A075B6H5 130 aa11.35□□□□□ -0.59
CDH1-201ENST00000261769 NTF4P34130 210 aa11.35□□□□□ -0.59
CDH1-201ENST00000261769 OR4D5Q8NGN0 318 aa11.35□□□□□ -0.59
CDH1-201ENST00000261769 TMEM101Q96IK0 257 aa11.35□□□□□ -0.59
CDH1-201ENST00000261769 DAZAP2Q15038 168 aaPredicted RBP11.35□□□□□ -0.59
CDH1-201ENST00000261769 RARRES2Q99969 163 aa11.35□□□□□ -0.59
CDH1-201ENST00000261769 ATG101Q9BSB4 218 aa11.35□□□□□ -0.59
CDH1-201ENST00000261769 A0A1W2PRE2 83 aa11.35□□□□□ -0.59
CDH1-201ENST00000261769 C1QTNF4Q9BXJ3 329 aa11.35□□□□□ -0.59
CDH1-201ENST00000261769 SNRPEP62304 92 aaKnown RBP11.35□□□□□ -0.59
CDH1-201ENST00000261769 SFRP2Q96HF1 295 aa11.35□□□□□ -0.59
CDH1-201ENST00000261769 TRGV9Q99603 122 aa11.35□□□□□ -0.59
CDH1-201ENST00000261769 TRGV11A0A075B6L2 103 aa11.34□□□□□ -0.59
CDH1-201ENST00000261769 ZNF503-AS2A6NEH8 195 aa11.34□□□□□ -0.59
CDH1-201ENST00000261769 ZNF324O75467 553 aaPredicted RBP11.34□□□□□ -0.59
CDH1-201ENST00000261769 SRSF9Q13242 221 aaKnown RBP eCLIP11.34□□□□□ -0.59
CDH1-201ENST00000261769 M0R3E3 92 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms