RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 J3QRE1 110 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 MYOD1P15172 320 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 LAIR2Q6ISS4 152 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 THSD7BQ9C0I4 1608 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 SAA2-SAA4A0A096LPE2 208 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 SAA2P0DJI9 122 aaPredicted RBP4.03□□□□□ -1.76
RC3H1-201ENST00000258349 CKS1BP61024 79 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 GAGE13Q4V321 117 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 SLC50A1Q9BRV3 221 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 RNASE7Q9H1E1 156 aaKnown RBP4.03□□□□□ -1.76
RC3H1-201ENST00000258349 CHTOPQ9Y3Y2 248 aaKnown RBP4.03□□□□□ -1.76
RC3H1-201ENST00000258349 SLC25A48Q6ZT89 311 aaKnown RBP4.03□□□□□ -1.76
RC3H1-201ENST00000258349 TMEM238C9JI98 176 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 NDUFS8O00217 210 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 LINC00114Q6XXX2 140 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 FBXL7Q9UJT9 491 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 YPEL1O60688 119 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 APOBEC3AP31941 199 aaPredicted RBP4.03□□□□□ -1.76
RC3H1-201ENST00000258349 EGR4Q05215 589 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 BSPH1Q075Z2 132 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 ZXDCQ2QGD7 858 aaPredicted RBP4.03□□□□□ -1.76
RC3H1-201ENST00000258349 YPEL2Q96QA6 119 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 SEPSECSQ9HD40 501 aaKnown RBP4.03□□□□□ -1.76
RC3H1-201ENST00000258349 IGKV3OR2-268A0A0C4DH90 116 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 C17orf98A8MV24 154 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 H3BTX0 84 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 IGKV1D-33P01593 117 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 IGKV1-33P01594 117 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 FOXA3P55318 350 aaPredicted RBP4.03□□□□□ -1.76
RC3H1-201ENST00000258349 ZIC4Q8N9L1 334 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 HIST1H2BLQ99880 126 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 REPIN1Q9BWE0 567 aaKnown RBP4.03□□□□□ -1.76
RC3H1-201ENST00000258349 TRAV24A0A0B4J272 114 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 LINC00587B1AMM8 73 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 ATXN8Q156A1 80 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 PPP1R27Q86WC6 154 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 SLC25A45Q8N413 288 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 TSKUQ8WUA8 353 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 IGHV2OR16-5A0A0B4J2B6 119 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 H3BUT2 72 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 TNFSF13O75888 250 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 FAM90A2PQ658T7 463 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 SAP25Q8TEE9 199 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 RNF126Q9BV68 326 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 A8MWV9 139 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 ESDP10768 282 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 ZNF362Q5T0B9 420 aaPredicted RBP4.03□□□□□ -1.76
RC3H1-201ENST00000258349 MIR17HGQ75NE6 70 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 KIR3DL3Q8N743 410 aa4.03□□□□□ -1.76
RC3H1-201ENST00000258349 MRPL20Q9BYC9 149 aaKnown RBP4.03□□□□□ -1.76
RC3H1-201ENST00000258349 TRBV6-7A0A0A0MS04 114 aa4.03□□□□□ -1.77
RC3H1-201ENST00000258349 RNF222A6NCQ9 220 aa4.03□□□□□ -1.77
RC3H1-201ENST00000258349 CD5P06127 495 aa4.03□□□□□ -1.77
RC3H1-201ENST00000258349 LINC00614P0C842 121 aa4.03□□□□□ -1.77
RC3H1-201ENST00000258349 RIPPLY3P57055 190 aa4.03□□□□□ -1.77
RC3H1-201ENST00000258349 HIST3H2BBQ8N257 126 aa4.03□□□□□ -1.77
RC3H1-201ENST00000258349 PEMTQ9UBM1 199 aa4.03□□□□□ -1.77
RC3H1-201ENST00000258349 GGTLC3B5MD39 225 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 C12orf77C9JDV5 145 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 M0R2P5 195 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 IGHV3-48P01763 117 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 TIMP3P35625 211 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 A0A1W2PRS3 328 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 C9JCJ5 164 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 TFF2Q03403 129 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 TMEM167AQ8TBQ9 72 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 EPDR1Q9UM22 224 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 A0A1W2PRE2 83 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 NBR2O15453 112 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 CRPP02741 224 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 FOXL1Q12952 345 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 TMEM144Q7Z5S9 345 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 ZNRF1Q8ND25 227 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 NEU4Q8WWR8 484 aaPredicted RBP4.02□□□□□ -1.77
RC3H1-201ENST00000258349 DLX4Q92988 240 aaPredicted RBP4.02□□□□□ -1.77
RC3H1-201ENST00000258349 SLC25A28Q96A46 364 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 TRGV11A0A075B6L2 103 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 ATP5G3P48201 142 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 LDLRAD2Q5SZI1 272 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 C1QL2Q7Z5L3 287 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 SPRED2Q7Z698 418 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 NHP2Q9NX24 153 aaKnown RBP4.02□□□□□ -1.77
RC3H1-201ENST00000258349 DPM3Q9P2X0 92 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 LGALS1P09382 135 aaKnown RBP4.02□□□□□ -1.77
RC3H1-201ENST00000258349 ATRAIDQ6UW56 229 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 MEGF9Q9H1U4 602 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 SLC25A15Q9Y619 301 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 FGF16O43320 207 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 PF4P02776 101 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 IL9P15248 144 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 MORN3Q6PF18 240 aaPredicted RBP4.02□□□□□ -1.77
RC3H1-201ENST00000258349 CENPVQ7Z7K6 275 aaPredicted RBP4.02□□□□□ -1.77
RC3H1-201ENST00000258349 TMEM86BQ8N661 226 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 MSGN1A6NI15 193 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 CDCP2Q5VXM1 449 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 LINC01587Q99440 93 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.02□□□□□ -1.77
RC3H1-201ENST00000258349 TBX6O95947 436 aaPredicted RBP4.02□□□□□ -1.77
RC3H1-201ENST00000258349 TDGF1P13385 188 aa4.02□□□□□ -1.77
RC3H1-201ENST00000258349 LY6EQ16553 131 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms