RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 CD55P08174 381 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 IGHV3-43DP0DP04 118 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 VDAC2P45880 294 aaPredicted RBP3.41□□□□□ -1.86
UBE4A-201ENST00000252108 TCL1AP56279 114 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 CD69Q07108 199 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 C3orf36Q3SXR2 165 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 MBNL2Q5VZF2 373 aaKnown RBP3.41□□□□□ -1.86
UBE4A-201ENST00000252108 ZNF788Q6ZQV5 615 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 Q6ZWC4 215 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 ERASQ7Z444 233 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 SVIPQ8NHG7 77 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 LOXL4Q96JB6 756 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 LINC00574Q9H8X3 128 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 SPRR3Q9UBC9 169 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 TRAV34A0A0B4J273 112 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 C22orf46C9J442 243 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 IGKV3-15P01624 115 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 GPR6P46095 362 aaPredicted RBP3.41□□□□□ -1.86
UBE4A-201ENST00000252108 NHLH1Q02575 133 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 Q6ZR03 302 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 TMEM136Q6ZRR5 245 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 SEM1Q6ZVN7 128 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 BHLHA15Q7RTS1 189 aaPredicted RBP3.41□□□□□ -1.86
UBE4A-201ENST00000252108 MOB3BQ86TA1 216 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 ZNF835Q9Y2P0 537 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 RFNGQ9Y644 331 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 IGHV3OR16-12A0A075B7B8 117 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 A0A1W2PR80 420 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 SLC17A3O00476 420 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 FCN3O75636 299 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 OR2J3O76001 311 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 C3orf79P0CE67 100 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 CFHR2P36980 270 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 CDKN1BP46527 198 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 CAMPP49913 170 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 MSMPQ1L6U9 139 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 SPINK9Q5DT21 86 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 UBALD1Q8TB05 177 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 NEUROG1Q92886 237 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 HARBI1Q96MB7 349 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 VGLL1Q99990 258 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 AURKAIP1Q9NWT8 199 aaPredicted RBP3.41□□□□□ -1.86
UBE4A-201ENST00000252108 V9GYV3 84 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 KBTBD11-OT1A0A1B0GTJ5 212 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 DEFB108AA8MXU0 73 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 OR9G9P0C7N8 305 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 SMIM17P0DL12 118 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 SPINK14Q6IE38 97 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 TCF23Q7RTU1 214 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 OR4C13Q8NGP0 309 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 VCX2Q9H322 139 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 HIGD1AQ9Y241 93 aa3.41□□□□□ -1.86
UBE4A-201ENST00000252108 DYSFO75923 2080 aa3.4□□□□□ -1.86
UBE4A-201ENST00000252108 A0A1W2PS18 150 aa3.4□□□□□ -1.86
UBE4A-201ENST00000252108 RAMP3O60896 148 aa3.4□□□□□ -1.86
UBE4A-201ENST00000252108 SP9P0CG40 484 aa3.4□□□□□ -1.86
UBE4A-201ENST00000252108 SRD5A1P18405 259 aa3.4□□□□□ -1.86
UBE4A-201ENST00000252108 TNFAIP6P98066 277 aaPredicted RBP3.4□□□□□ -1.86
UBE4A-201ENST00000252108 FOXF2Q12947 444 aa3.4□□□□□ -1.86
UBE4A-201ENST00000252108 ABHD12Q8N2K0 398 aa3.4□□□□□ -1.86
UBE4A-201ENST00000252108 OTORQ9NRC9 128 aa3.4□□□□□ -1.86
UBE4A-201ENST00000252108 PRR14LQ5THK1 2151 aa3.4□□□□□ -1.86
UBE4A-201ENST00000252108 SRRM5B3KS81 715 aa3.4□□□□□ -1.86
UBE4A-201ENST00000252108 K7EP13 123 aa3.4□□□□□ -1.86
UBE4A-201ENST00000252108 FABP2P12104 132 aa3.4□□□□□ -1.86
UBE4A-201ENST00000252108 IGFBP2P18065 325 aa3.4□□□□□ -1.86
UBE4A-201ENST00000252108 RPL30P62888 115 aaKnown RBP3.4□□□□□ -1.86
UBE4A-201ENST00000252108 PSG7Q13046 419 aa3.4□□□□□ -1.86
UBE4A-201ENST00000252108 CDPF1Q6NVV7 123 aa3.4□□□□□ -1.86
UBE4A-201ENST00000252108 NUDT10Q8NFP7 164 aa3.4□□□□□ -1.86
UBE4A-201ENST00000252108 OR13A1Q8NGR1 328 aa3.4□□□□□ -1.86
UBE4A-201ENST00000252108 OR2T6Q8NHC8 308 aa3.4□□□□□ -1.86
UBE4A-201ENST00000252108 PSMG3-AS1Q96PY0 264 aa3.4□□□□□ -1.86
UBE4A-201ENST00000252108 AP5S1Q9NUS5 200 aa3.4□□□□□ -1.86
UBE4A-201ENST00000252108 TCRBV4S1A1TA0A5B7 111 aa3.4□□□□□ -1.87
UBE4A-201ENST00000252108 SPINK4O60575 86 aa3.4□□□□□ -1.87
UBE4A-201ENST00000252108 KRTCAP3Q53RY4 240 aa3.4□□□□□ -1.87
UBE4A-201ENST00000252108 WDR82Q6UXN9 313 aa3.4□□□□□ -1.87
UBE4A-201ENST00000252108 MIR17HGQ75NE6 70 aa3.4□□□□□ -1.87
UBE4A-201ENST00000252108 DOLPP1Q86YN1 238 aa3.4□□□□□ -1.87
UBE4A-201ENST00000252108 LSM4Q9Y4Z0 139 aaKnown RBP3.4□□□□□ -1.87
UBE4A-201ENST00000252108 GLRXP35754 106 aa3.4□□□□□ -1.87
UBE4A-201ENST00000252108 RAB9AP51151 201 aa3.4□□□□□ -1.87
UBE4A-201ENST00000252108 MMDQ15546 238 aa3.4□□□□□ -1.87
UBE4A-201ENST00000252108 SLC25A48Q6ZT89 311 aaKnown RBP3.4□□□□□ -1.87
UBE4A-201ENST00000252108 SRSF8Q9BRL6 282 aaKnown RBP3.4□□□□□ -1.87
UBE4A-201ENST00000252108 SLC25A33Q9BSK2 321 aa3.4□□□□□ -1.87
UBE4A-201ENST00000252108 TMEM14BQ9NUH8 114 aa3.4□□□□□ -1.87
UBE4A-201ENST00000252108 PLA2G3Q9NZ20 509 aa3.4□□□□□ -1.87
UBE4A-201ENST00000252108 FBXL7Q9UJT9 491 aa3.4□□□□□ -1.87
UBE4A-201ENST00000252108 EPDR1Q9UM22 224 aa3.4□□□□□ -1.87
UBE4A-201ENST00000252108 ZNF407Q9C0G0 2248 aa3.4□□□□□ -1.87
UBE4A-201ENST00000252108 INS-IGF2F8WCM5 200 aa3.4□□□□□ -1.87
UBE4A-201ENST00000252108 TNFRSF13BO14836 293 aaPredicted RBP3.4□□□□□ -1.87
UBE4A-201ENST00000252108 TOMM40O96008 361 aa3.4□□□□□ -1.87
UBE4A-201ENST00000252108 GPR183P32249 361 aa3.4□□□□□ -1.87
UBE4A-201ENST00000252108 ZNF83P51522 516 aa3.4□□□□□ -1.87
UBE4A-201ENST00000252108 PRR20EP86478 221 aa3.4□□□□□ -1.87
UBE4A-201ENST00000252108 PRR20CP86479 221 aa3.4□□□□□ -1.87
UBE4A-201ENST00000252108 PRR20DP86480 221 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms