RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 NPIPB5A8MRT5 1133 aa18.45■□□□□ 0.54
MSX2-201ENST00000239243 CD99P14209 185 aa18.45■□□□□ 0.54
MSX2-201ENST00000239243 OR5B12Q96R08 314 aa18.45■□□□□ 0.54
MSX2-201ENST00000239243 IGHV3-21A0A0B4J1V1 117 aa18.44■□□□□ 0.54
MSX2-201ENST00000239243 NPFFO15130 113 aa18.44■□□□□ 0.54
MSX2-201ENST00000239243 FABP1P07148 127 aa18.44■□□□□ 0.54
MSX2-201ENST00000239243 CXCL1P09341 107 aa18.44■□□□□ 0.54
MSX2-201ENST00000239243 OR10J4P0C629 311 aa18.44■□□□□ 0.54
MSX2-201ENST00000239243 RPS10P46783 165 aaKnown RBP18.44■□□□□ 0.54
MSX2-201ENST00000239243 PLP1P60201 277 aa18.44■□□□□ 0.54
MSX2-201ENST00000239243 PAX8Q06710 450 aa18.44■□□□□ 0.54
MSX2-201ENST00000239243 FBLN7Q53RD9 439 aa18.44■□□□□ 0.54
MSX2-201ENST00000239243 RUSC1-AS1Q66K80 236 aa18.44■□□□□ 0.54
MSX2-201ENST00000239243 LINC00305Q7Z4B0 112 aa18.44■□□□□ 0.54
MSX2-201ENST00000239243 C2CD4CQ8TF44 421 aa18.44■□□□□ 0.54
MSX2-201ENST00000239243 S100PP25815 95 aa18.43■□□□□ 0.54
MSX2-201ENST00000239243 ZNF843Q8N446 348 aa18.43■□□□□ 0.54
MSX2-201ENST00000239243 OR1B1Q8NGR6 318 aa18.43■□□□□ 0.54
MSX2-201ENST00000239243 FAM103A1Q9BTL3 118 aaKnown RBP18.43■□□□□ 0.54
MSX2-201ENST00000239243 PAXXQ9BUH6 204 aa18.43■□□□□ 0.54
MSX2-201ENST00000239243 TACC2O95359 2948 aa18.43■□□□□ 0.54
MSX2-201ENST00000239243 TRBV24-1A0A075B6N3 115 aa18.43■□□□□ 0.54
MSX2-201ENST00000239243 TGOLN2O43493 480 aa18.43■□□□□ 0.54
MSX2-201ENST00000239243 HYPMO75409 117 aa18.43■□□□□ 0.54
MSX2-201ENST00000239243 IGLC1P0CG04 106 aa18.43■□□□□ 0.54
MSX2-201ENST00000239243 ORM2P19652 201 aa18.43■□□□□ 0.54
MSX2-201ENST00000239243 MORN5Q5VZ52 161 aa18.43■□□□□ 0.54
MSX2-201ENST00000239243 AJUBAQ96IF1 538 aa18.43■□□□□ 0.54
MSX2-201ENST00000239243 OR51M1Q9H341 326 aa18.43■□□□□ 0.54
MSX2-201ENST00000239243 WNK2Q9Y3S1 2297 aa18.42■□□□□ 0.54
MSX2-201ENST00000239243 TGIF2-C20orf24A0A0A6YYL0 155 aa18.42■□□□□ 0.54
MSX2-201ENST00000239243 TRAV5A0A0B4J249 113 aa18.42■□□□□ 0.54
MSX2-201ENST00000239243 IGHV4-61A0A0C4DH41 118 aa18.42■□□□□ 0.54
MSX2-201ENST00000239243 C9JCJ5 164 aa18.42■□□□□ 0.54
MSX2-201ENST00000239243 PPP1R2P9O14990 202 aa18.42■□□□□ 0.54
MSX2-201ENST00000239243 RASL11BQ9BPW5 248 aa18.42■□□□□ 0.54
MSX2-201ENST00000239243 LY96Q9Y6Y9 160 aa18.42■□□□□ 0.54
MSX2-201ENST00000239243 K7EIM0 57 aa18.42■□□□□ 0.54
MSX2-201ENST00000239243 FAM210BQ96KR6 192 aa18.42■□□□□ 0.54
MSX2-201ENST00000239243 SSX3Q99909 188 aa18.42■□□□□ 0.54
MSX2-201ENST00000239243 S100A6P06703 90 aa18.41■□□□□ 0.54
MSX2-201ENST00000239243 AKAP6Q13023 2319 aa18.41■□□□□ 0.54
MSX2-201ENST00000239243 TTC9CQ8N5M4 171 aa18.41■□□□□ 0.54
MSX2-201ENST00000239243 SAV1Q9H4B6 383 aaPredicted RBP18.41■□□□□ 0.54
MSX2-201ENST00000239243 CENPVL3A0A0U1RRI6 287 aa18.41■□□□□ 0.54
MSX2-201ENST00000239243 RBM14Q96PK6 669 aaKnown RBP18.41■□□□□ 0.54
MSX2-201ENST00000239243 TRBV20OR9-2A0A075B6H5 130 aa18.4■□□□□ 0.54
MSX2-201ENST00000239243 HLA-DRB1P01911 266 aa18.4■□□□□ 0.54
MSX2-201ENST00000239243 GALR1P47211 349 aa18.4■□□□□ 0.54
MSX2-201ENST00000239243 DSCR9P59020 149 aa18.4■□□□□ 0.54
MSX2-201ENST00000239243 OR5T1Q8NG75 326 aa18.4■□□□□ 0.54
MSX2-201ENST00000239243 GGTLC3B5MD39 225 aa18.39■□□□□ 0.54
MSX2-201ENST00000239243 Q8N9W7 124 aa18.39■□□□□ 0.54
MSX2-201ENST00000239243 THYN1Q9P016 225 aa18.39■□□□□ 0.54
MSX2-201ENST00000239243 PFN1P07737 140 aaKnown RBP18.39■□□□□ 0.53
MSX2-201ENST00000239243 RPL35P42766 123 aaKnown RBP18.39■□□□□ 0.53
MSX2-201ENST00000239243 SUMO1P63165 101 aaKnown RBP18.39■□□□□ 0.53
MSX2-201ENST00000239243 IGLV11-55A0A075B6I3 123 aa18.38■□□□□ 0.53
MSX2-201ENST00000239243 MDFIC2A0A1B0GVS7 189 aa18.38■□□□□ 0.53
MSX2-201ENST00000239243 PSG1P11464 419 aa18.38■□□□□ 0.53
MSX2-201ENST00000239243 SRP14P37108 136 aaKnown RBP18.38■□□□□ 0.53
MSX2-201ENST00000239243 ASPHD1Q5U4P2 390 aa18.38■□□□□ 0.53
MSX2-201ENST00000239243 SPTAN1Q13813 2472 aaKnown RBP18.38■□□□□ 0.53
MSX2-201ENST00000239243 TRAV30A0A087WSZ9 112 aa18.38■□□□□ 0.53
MSX2-201ENST00000239243 HELTA6NFD8 242 aa18.38■□□□□ 0.53
MSX2-201ENST00000239243 PYYP10082 97 aa18.38■□□□□ 0.53
MSX2-201ENST00000239243 COX6B1P14854 86 aa18.38■□□□□ 0.53
MSX2-201ENST00000239243 CRYBB3P26998 211 aa18.38■□□□□ 0.53
MSX2-201ENST00000239243 NDPQ00604 133 aa18.38■□□□□ 0.53
MSX2-201ENST00000239243 PIP4P2Q8N4L2 257 aa18.38■□□□□ 0.53
MSX2-201ENST00000239243 TCEAL7Q9BRU2 100 aa18.38■□□□□ 0.53
MSX2-201ENST00000239243 HIGD1AQ9Y241 93 aa18.38■□□□□ 0.53
MSX2-201ENST00000239243 FAM120AOSQ5T036 256 aa18.37■□□□□ 0.53
MSX2-201ENST00000239243 KCNIP4Q6PIL6 250 aa18.37■□□□□ 0.53
MSX2-201ENST00000239243 FXYD5Q96DB9 178 aa18.37■□□□□ 0.53
MSX2-201ENST00000239243 SFRP2Q96HF1 295 aa18.37■□□□□ 0.53
MSX2-201ENST00000239243 ZNF48Q96MX3 618 aaPredicted RBP18.37■□□□□ 0.53
MSX2-201ENST00000239243 GSX1Q9H4S2 264 aaPredicted RBP18.37■□□□□ 0.53
MSX2-201ENST00000239243 IGHV4-30-2A0A087WSY4 118 aa18.37■□□□□ 0.53
MSX2-201ENST00000239243 IGHV7-81A0A0B4J1V7 117 aa18.37■□□□□ 0.53
MSX2-201ENST00000239243 PAX1P15863 534 aa18.37■□□□□ 0.53
MSX2-201ENST00000239243 TIGITQ495A1 244 aa18.37■□□□□ 0.53
MSX2-201ENST00000239243 SMUG1Q53HV7 270 aa18.37■□□□□ 0.53
MSX2-201ENST00000239243 PYGO2Q9BRQ0 406 aa18.37■□□□□ 0.53
MSX2-201ENST00000239243 USP9XQ93008 2570 aaPredicted RBP18.36■□□□□ 0.53
MSX2-201ENST00000239243 RD3LP0DJH9 198 aa18.36■□□□□ 0.53
MSX2-201ENST00000239243 OCC1Q8TAD7 63 aa18.36■□□□□ 0.53
MSX2-201ENST00000239243 FANCD2OSQ96PS1 177 aa18.36■□□□□ 0.53
MSX2-201ENST00000239243 IMMP2LQ96T52 175 aa18.36■□□□□ 0.53
MSX2-201ENST00000239243 IGHV1-69DA0A0B4J2H0 117 aa18.35■□□□□ 0.53
MSX2-201ENST00000239243 PGPEP1LA6NFU8 196 aa18.35■□□□□ 0.53
MSX2-201ENST00000239243 IGKV1-17P01599 117 aa18.35■□□□□ 0.53
MSX2-201ENST00000239243 IGHV1-69P01742 117 aa18.35■□□□□ 0.53
MSX2-201ENST00000239243 LYZP61626 148 aa18.35■□□□□ 0.53
MSX2-201ENST00000239243 NECAP1Q8NC96 275 aa18.35■□□□□ 0.53
MSX2-201ENST00000239243 GNG4P50150 75 aa18.35■□□□□ 0.53
MSX2-201ENST00000239243 MFAP4P55083 255 aa18.35■□□□□ 0.53
MSX2-201ENST00000239243 BTF3L4Q96K17 158 aa18.35■□□□□ 0.53
MSX2-201ENST00000239243 AURKAIP1Q9NWT8 199 aaPredicted RBP18.35■□□□□ 0.53
MSX2-201ENST00000239243 FLNCQ14315 2725 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms