RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 ARPC1AQ92747 370 aa13.64□□□□□ -0.23
RABGGTA-201ENST00000216840 ARL2-SNX15V9GYD0 113 aa13.64□□□□□ -0.23
RABGGTA-201ENST00000216840 CXorf65A6NEN9 183 aa13.63□□□□□ -0.23
RABGGTA-201ENST00000216840 TSPAN9O75954 239 aa13.63□□□□□ -0.23
RABGGTA-201ENST00000216840 GSX1Q9H4S2 264 aaPredicted RBP13.63□□□□□ -0.23
RABGGTA-201ENST00000216840 ABCA1O95477 2261 aa13.63□□□□□ -0.23
RABGGTA-201ENST00000216840 A1L4Q6 167 aa13.63□□□□□ -0.23
RABGGTA-201ENST00000216840 K7EIM0 57 aa13.63□□□□□ -0.23
RABGGTA-201ENST00000216840 PAX1P15863 534 aa13.63□□□□□ -0.23
RABGGTA-201ENST00000216840 RNF212Q495C1 297 aa13.63□□□□□ -0.23
RABGGTA-201ENST00000216840 Q8N9W7 124 aa13.63□□□□□ -0.23
RABGGTA-201ENST00000216840 OR1L6Q8NGR2 347 aa13.63□□□□□ -0.23
RABGGTA-201ENST00000216840 DERL1Q9BUN8 251 aa13.63□□□□□ -0.23
RABGGTA-201ENST00000216840 TMEM242Q9NWH2 141 aa13.63□□□□□ -0.23
RABGGTA-201ENST00000216840 MLXQ9UH92 298 aa13.63□□□□□ -0.23
RABGGTA-201ENST00000216840 SCO2A0A1W2PP80 73 aa13.62□□□□□ -0.23
RABGGTA-201ENST00000216840 NPIPB5A8MRT5 1133 aa13.62□□□□□ -0.23
RABGGTA-201ENST00000216840 RAB5AP20339 215 aa13.62□□□□□ -0.23
RABGGTA-201ENST00000216840 UHRF2Q96PU4 802 aa13.62□□□□□ -0.23
RABGGTA-201ENST00000216840 ZNF355PQ9NSJ1 428 aa13.62□□□□□ -0.23
RABGGTA-201ENST00000216840 C1RLQ9NZP8 487 aa13.62□□□□□ -0.23
RABGGTA-201ENST00000216840 OR10J4P0C629 311 aa13.62□□□□□ -0.23
RABGGTA-201ENST00000216840 IGLC1P0CG04 106 aa13.62□□□□□ -0.23
RABGGTA-201ENST00000216840 ZNF343Q6P1L6 599 aa13.62□□□□□ -0.23
RABGGTA-201ENST00000216840 OR5AU1Q8NGC0 362 aa13.62□□□□□ -0.23
RABGGTA-201ENST00000216840 ELOA3CA0A087WX78 387 aaPredicted RBP13.61□□□□□ -0.23
RABGGTA-201ENST00000216840 IGHV7-81A0A0B4J1V7 117 aa13.61□□□□□ -0.23
RABGGTA-201ENST00000216840 FLI1Q01543 452 aaPredicted RBP13.61□□□□□ -0.23
RABGGTA-201ENST00000216840 ELOBQ15370 118 aa13.61□□□□□ -0.23
RABGGTA-201ENST00000216840 KLF17Q5JT82 389 aaPredicted RBP13.61□□□□□ -0.23
RABGGTA-201ENST00000216840 TTC9CQ8N5M4 171 aa13.61□□□□□ -0.23
RABGGTA-201ENST00000216840 CTDSP1Q9GZU7 261 aa13.61□□□□□ -0.23
RABGGTA-201ENST00000216840 FAM208BQ5VWN6 2430 aa13.61□□□□□ -0.23
RABGGTA-201ENST00000216840 IGHV3OR16-10A0A075B7F0 116 aa13.6□□□□□ -0.23
RABGGTA-201ENST00000216840 IGHV1-69DA0A0B4J2H0 117 aa13.6□□□□□ -0.23
RABGGTA-201ENST00000216840 IGHV1-69P01742 117 aa13.6□□□□□ -0.23
RABGGTA-201ENST00000216840 EGR2P11161 476 aaPredicted RBP13.6□□□□□ -0.23
RABGGTA-201ENST00000216840 ORM2P19652 201 aa13.6□□□□□ -0.23
RABGGTA-201ENST00000216840 DSCR9P59020 149 aa13.6□□□□□ -0.23
RABGGTA-201ENST00000216840 OR1B1Q8NGR6 318 aa13.6□□□□□ -0.23
RABGGTA-201ENST00000216840 Q8WTZ3 238 aa13.6□□□□□ -0.23
RABGGTA-201ENST00000216840 C11orf52Q96A22 123 aa13.6□□□□□ -0.23
RABGGTA-201ENST00000216840 SSX3Q99909 188 aa13.6□□□□□ -0.23
RABGGTA-201ENST00000216840 CLDN34H7C241 214 aa13.6□□□□□ -0.23
RABGGTA-201ENST00000216840 HLA-DRB1P01911 266 aa13.6□□□□□ -0.23
RABGGTA-201ENST00000216840 LINC00305Q7Z4B0 112 aa13.6□□□□□ -0.23
RABGGTA-201ENST00000216840 FANCD2OSQ96PS1 177 aa13.6□□□□□ -0.23
RABGGTA-201ENST00000216840 PRELID1Q9Y255 219 aa13.6□□□□□ -0.23
RABGGTA-201ENST00000216840 URGCP-MRPS24S4R325 110 aa13.6□□□□□ -0.23
RABGGTA-201ENST00000216840 IGLV11-55A0A075B6I3 123 aa13.59□□□□□ -0.23
RABGGTA-201ENST00000216840 PLP1P60201 277 aa13.59□□□□□ -0.23
RABGGTA-201ENST00000216840 TIGITQ495A1 244 aa13.59□□□□□ -0.23
RABGGTA-201ENST00000216840 RBM14Q96PK6 669 aaKnown RBP13.59□□□□□ -0.23
RABGGTA-201ENST00000216840 VPS13CQ709C8 3753 aa13.59□□□□□ -0.23
RABGGTA-201ENST00000216840 LRRK2Q5S007 2527 aa13.59□□□□□ -0.23
RABGGTA-201ENST00000216840 CXCL1P09341 107 aa13.59□□□□□ -0.23
RABGGTA-201ENST00000216840 UBE2L3P68036 154 aaKnown RBP13.59□□□□□ -0.23
RABGGTA-201ENST00000216840 C16orf82Q7Z2V1 217 aa13.59□□□□□ -0.23
RABGGTA-201ENST00000216840 LINC01551Q86U37 167 aa13.59□□□□□ -0.23
RABGGTA-201ENST00000216840 RASL11BQ9BPW5 248 aa13.59□□□□□ -0.23
RABGGTA-201ENST00000216840 PAXXQ9BUH6 204 aa13.59□□□□□ -0.23
RABGGTA-201ENST00000216840 TRBV20OR9-2A0A075B6H5 130 aa13.58□□□□□ -0.24
RABGGTA-201ENST00000216840 TRAV40A0A0B4J280 105 aa13.58□□□□□ -0.24
RABGGTA-201ENST00000216840 A0A1W2PRE2 83 aa13.58□□□□□ -0.24
RABGGTA-201ENST00000216840 HYPMO75409 117 aa13.58□□□□□ -0.24
RABGGTA-201ENST00000216840 IGKV1-17P01599 117 aa13.58□□□□□ -0.24
RABGGTA-201ENST00000216840 MSMBP08118 114 aa13.58□□□□□ -0.24
RABGGTA-201ENST00000216840 PYYP10082 97 aa13.58□□□□□ -0.24
RABGGTA-201ENST00000216840 PSG1P11464 419 aa13.58□□□□□ -0.24
RABGGTA-201ENST00000216840 HSPB9Q9BQS6 159 aa13.58□□□□□ -0.24
RABGGTA-201ENST00000216840 OR51M1Q9H341 326 aa13.58□□□□□ -0.24
RABGGTA-201ENST00000216840 TGIF2-C20orf24A0A0A6YYL0 155 aa13.57□□□□□ -0.24
RABGGTA-201ENST00000216840 GGTLC3B5MD39 225 aa13.57□□□□□ -0.24
RABGGTA-201ENST00000216840 ZFP82Q8N141 532 aa13.57□□□□□ -0.24
RABGGTA-201ENST00000216840 C1orf196B1AJZ1 125 aa13.57□□□□□ -0.24
RABGGTA-201ENST00000216840 CLEC12BQ2HXU8 276 aa13.57□□□□□ -0.24
RABGGTA-201ENST00000216840 BRD3OSQ6XYD6 125 aa13.57□□□□□ -0.24
RABGGTA-201ENST00000216840 FXYD5Q96DB9 178 aa13.57□□□□□ -0.24
RABGGTA-201ENST00000216840 CRYBG3Q68DQ2 2970 aa13.56□□□□□ -0.24
RABGGTA-201ENST00000216840 PGPEP1LA6NFU8 196 aa13.56□□□□□ -0.24
RABGGTA-201ENST00000216840 OR5T1Q8NG75 326 aa13.56□□□□□ -0.24
RABGGTA-201ENST00000216840 AURKAIP1Q9NWT8 199 aaPredicted RBP13.56□□□□□ -0.24
RABGGTA-201ENST00000216840 IGHV4-38-2P0DP08 117 aa13.55□□□□□ -0.24
RABGGTA-201ENST00000216840 CRYBB3P26998 211 aa13.55□□□□□ -0.24
RABGGTA-201ENST00000216840 RAB5BP61020 215 aa13.55□□□□□ -0.24
RABGGTA-201ENST00000216840 SUMO1P63165 101 aaKnown RBP13.55□□□□□ -0.24
RABGGTA-201ENST00000216840 ANAPC16Q96DE5 110 aa13.55□□□□□ -0.24
RABGGTA-201ENST00000216840 SVEP1Q4LDE5 3571 aa13.55□□□□□ -0.24
RABGGTA-201ENST00000216840 H7BYZ3 331 aa13.55□□□□□ -0.24
RABGGTA-201ENST00000216840 SLC25A16P16260 332 aa13.55□□□□□ -0.24
RABGGTA-201ENST00000216840 LYZP61626 148 aa13.55□□□□□ -0.24
RABGGTA-201ENST00000216840 C2CD4CQ8TF44 421 aa13.55□□□□□ -0.24
RABGGTA-201ENST00000216840 MEGF9Q9H1U4 602 aa13.55□□□□□ -0.24
RABGGTA-201ENST00000216840 C7orf69Q9H7B7 122 aa13.55□□□□□ -0.24
RABGGTA-201ENST00000216840 HIGD1AQ9Y241 93 aa13.55□□□□□ -0.24
RABGGTA-201ENST00000216840 S4R3C0 116 aa13.55□□□□□ -0.24
RABGGTA-201ENST00000216840 A0A0U1RQK1 487 aa13.54□□□□□ -0.24
RABGGTA-201ENST00000216840 B4DSR2 109 aa13.54□□□□□ -0.24
RABGGTA-201ENST00000216840 RD3LP0DJH9 198 aa13.54□□□□□ -0.24
RABGGTA-201ENST00000216840 RPL35P42766 123 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms