RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 SLC25A2Q9BXI2 301 aa11.32□□□□□ -0.6
RTFDC1-201ENST00000023939 KLK9Q9UKQ9 250 aa11.32□□□□□ -0.6
RTFDC1-201ENST00000023939 AKAP6Q13023 2319 aa11.31□□□□□ -0.6
RTFDC1-201ENST00000023939 IGLV11-55A0A075B6I3 123 aa11.31□□□□□ -0.6
RTFDC1-201ENST00000023939 IGHV7-81A0A0B4J1V7 117 aa11.31□□□□□ -0.6
RTFDC1-201ENST00000023939 RPL23P62829 140 aaKnown RBP11.31□□□□□ -0.6
RTFDC1-201ENST00000023939 NDPQ00604 133 aa11.31□□□□□ -0.6
RTFDC1-201ENST00000023939 SPTAN1Q13813 2472 aaKnown RBP11.31□□□□□ -0.6
RTFDC1-201ENST00000023939 ZNF674Q2M3X9 581 aa11.31□□□□□ -0.6
RTFDC1-201ENST00000023939 OR51G1Q8NGK1 321 aa11.31□□□□□ -0.6
RTFDC1-201ENST00000023939 ISOC2Q96AB3 205 aa11.31□□□□□ -0.6
RTFDC1-201ENST00000023939 UHRF2Q96PU4 802 aa11.31□□□□□ -0.6
RTFDC1-201ENST00000023939 A0A1W2PRE2 83 aa11.3□□□□□ -0.6
RTFDC1-201ENST00000023939 B4DSR2 109 aa11.3□□□□□ -0.6
RTFDC1-201ENST00000023939 OR7C2O60412 319 aa11.3□□□□□ -0.6
RTFDC1-201ENST00000023939 CRYBA1P05813 215 aa11.3□□□□□ -0.6
RTFDC1-201ENST00000023939 FABP1P07148 127 aa11.3□□□□□ -0.6
RTFDC1-201ENST00000023939 EGR2P11161 476 aaPredicted RBP11.3□□□□□ -0.6
RTFDC1-201ENST00000023939 GATA3P23771 443 aa11.3□□□□□ -0.6
RTFDC1-201ENST00000023939 STXBP6Q8NFX7 210 aa11.3□□□□□ -0.6
RTFDC1-201ENST00000023939 FANCD2OSQ96PS1 177 aa11.3□□□□□ -0.6
RTFDC1-201ENST00000023939 FAM103A1Q9BTL3 118 aaKnown RBP11.3□□□□□ -0.6
RTFDC1-201ENST00000023939 MEGF9Q9H1U4 602 aa11.3□□□□□ -0.6
RTFDC1-201ENST00000023939 ZNF355PQ9NSJ1 428 aa11.3□□□□□ -0.6
RTFDC1-201ENST00000023939 ZNF462Q96JM2 2506 aa11.3□□□□□ -0.6
RTFDC1-201ENST00000023939 NDUFB4O95168 129 aa11.29□□□□□ -0.6
RTFDC1-201ENST00000023939 FLI1Q01543 452 aaPredicted RBP11.29□□□□□ -0.6
RTFDC1-201ENST00000023939 MORN5Q5VZ52 161 aa11.29□□□□□ -0.6
RTFDC1-201ENST00000023939 RASL11BQ9BPW5 248 aa11.29□□□□□ -0.6
RTFDC1-201ENST00000023939 TRAV20A0A0B4J274 112 aa11.29□□□□□ -0.6
RTFDC1-201ENST00000023939 CLDN34H7C241 214 aa11.29□□□□□ -0.6
RTFDC1-201ENST00000023939 HYPMO75409 117 aa11.29□□□□□ -0.6
RTFDC1-201ENST00000023939 IGKV1-17P01599 117 aa11.29□□□□□ -0.6
RTFDC1-201ENST00000023939 RAB5AP20339 215 aa11.29□□□□□ -0.6
RTFDC1-201ENST00000023939 CLEC12BQ2HXU8 276 aa11.29□□□□□ -0.6
RTFDC1-201ENST00000023939 FAM24BQ8N5W8 94 aa11.29□□□□□ -0.6
RTFDC1-201ENST00000023939 OR5AU1Q8NGC0 362 aa11.29□□□□□ -0.6
RTFDC1-201ENST00000023939 NRGNQ92686 78 aa11.29□□□□□ -0.6
RTFDC1-201ENST00000023939 WNK2Q9Y3S1 2297 aa11.28□□□□□ -0.6
RTFDC1-201ENST00000023939 TRAV30A0A087WSZ9 112 aa11.28□□□□□ -0.6
RTFDC1-201ENST00000023939 A0A096LNT2 108 aa11.28□□□□□ -0.6
RTFDC1-201ENST00000023939 IGHV3-21A0A0B4J1V1 117 aa11.28□□□□□ -0.6
RTFDC1-201ENST00000023939 SCO2A0A1W2PP80 73 aa11.28□□□□□ -0.6
RTFDC1-201ENST00000023939 KIAA0141Q14154 515 aaPredicted RBP11.28□□□□□ -0.6
RTFDC1-201ENST00000023939 ADIRFQ15847 76 aa11.28□□□□□ -0.6
RTFDC1-201ENST00000023939 LINC00305Q7Z4B0 112 aa11.28□□□□□ -0.6
RTFDC1-201ENST00000023939 SGMS2Q8NHU3 365 aa11.28□□□□□ -0.6
RTFDC1-201ENST00000023939 TMEM68Q96MH6 324 aa11.28□□□□□ -0.6
RTFDC1-201ENST00000023939 RBM14Q96PK6 669 aaKnown RBP11.28□□□□□ -0.6
RTFDC1-201ENST00000023939 MED13LQ71F56 2210 aa11.28□□□□□ -0.6
RTFDC1-201ENST00000023939 ABCA2Q9BZC7 2435 aa11.28□□□□□ -0.6
RTFDC1-201ENST00000023939 TRAV5A0A0B4J249 113 aa11.27□□□□□ -0.61
RTFDC1-201ENST00000023939 A1L4Q6 167 aa11.27□□□□□ -0.61
RTFDC1-201ENST00000023939 CD99P14209 185 aa11.27□□□□□ -0.61
RTFDC1-201ENST00000023939 HIST1H1BP16401 226 aaKnown RBP11.27□□□□□ -0.61
RTFDC1-201ENST00000023939 UBE2L3P68036 154 aaKnown RBP11.27□□□□□ -0.61
RTFDC1-201ENST00000023939 ELOBQ15370 118 aa11.27□□□□□ -0.61
RTFDC1-201ENST00000023939 LINC01551Q86U37 167 aa11.27□□□□□ -0.61
RTFDC1-201ENST00000023939 PAXXQ9BUH6 204 aa11.27□□□□□ -0.61
RTFDC1-201ENST00000023939 OR51M1Q9H341 326 aa11.27□□□□□ -0.61
RTFDC1-201ENST00000023939 THYN1Q9P016 225 aa11.27□□□□□ -0.61
RTFDC1-201ENST00000023939 MLXQ9UH92 298 aa11.27□□□□□ -0.61
RTFDC1-201ENST00000023939 LY96Q9Y6Y9 160 aa11.27□□□□□ -0.61
RTFDC1-201ENST00000023939 TRAV40A0A0B4J280 105 aa11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 C9JCJ5 164 aa11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 PSG1P11464 419 aa11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 ORM2P19652 201 aa11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 FCGR2BP31994 310 aaPredicted RBP11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 YPEL3P61236 119 aaPredicted RBP11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 TIGITQ495A1 244 aa11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 C5orf56Q8N8D9 126 aa11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 OR1B1Q8NGR6 318 aa11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 FAM110DQ8TAY7 271 aaPredicted RBP11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 PIFOQ8TCI5 191 aa11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 FXYD5Q96DB9 178 aa11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 ANAPC16Q96DE5 110 aa11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 TCEAL7Q9BRU2 100 aa11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 DERL1Q9BUN8 251 aa11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 C7orf69Q9H7B7 122 aa11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 BEX4Q9NWD9 120 aaPredicted RBP11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 GGTLC3B5MD39 225 aa11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 TOMM40O96008 361 aa11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 OR10J4P0C629 311 aa11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 RD3LP0DJH9 198 aa11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 MFAP4P55083 255 aa11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 HSPB9Q9BQS6 159 aa11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 GSX1Q9H4S2 264 aaPredicted RBP11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 MRPL27Q9P0M9 148 aaKnown RBP11.26□□□□□ -0.61
RTFDC1-201ENST00000023939 FLNCQ14315 2725 aa11.25□□□□□ -0.61
RTFDC1-201ENST00000023939 BAHCC1Q9P281 2608 aa11.25□□□□□ -0.61
RTFDC1-201ENST00000023939 TRBV20OR9-2A0A075B6H5 130 aa11.25□□□□□ -0.61
RTFDC1-201ENST00000023939 KLF17Q5JT82 389 aaPredicted RBP11.25□□□□□ -0.61
RTFDC1-201ENST00000023939 ZNF343Q6P1L6 599 aa11.25□□□□□ -0.61
RTFDC1-201ENST00000023939 C1QL4Q86Z23 238 aa11.25□□□□□ -0.61
RTFDC1-201ENST00000023939 LRRC75A-AS1Q8N1F1 130 aa11.25□□□□□ -0.61
RTFDC1-201ENST00000023939 Q8WTZ3 238 aa11.25□□□□□ -0.61
RTFDC1-201ENST00000023939 TXN2Q99757 166 aa11.25□□□□□ -0.61
RTFDC1-201ENST00000023939 HIF1ANQ9NWT6 349 aa11.25□□□□□ -0.61
RTFDC1-201ENST00000023939 HIGD1AQ9Y241 93 aa11.25□□□□□ -0.61
RTFDC1-201ENST00000023939 MOB4Q9Y3A3 225 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 1023.8 ms