RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 ZHX1-C8orf76Q96EF9 292 aa3.21□□□□□ -1.9
RFC1-217ENST00000639695 GINS3Q9BRX5 216 aa3.21□□□□□ -1.9
RFC1-217ENST00000639695 FAIMQ9NVQ4 179 aa3.21□□□□□ -1.9
RFC1-217ENST00000639695 KIF14Q15058 1648 aa3.21□□□□□ -1.9
RFC1-217ENST00000639695 KDM5BQ9UGL1 1544 aa3.2□□□□□ -1.9
RFC1-217ENST00000639695 IFNA7P01567 189 aa3.2□□□□□ -1.9
RFC1-217ENST00000639695 IFI30P13284 250 aa3.2□□□□□ -1.9
RFC1-217ENST00000639695 RHOBP62745 196 aa3.2□□□□□ -1.9
RFC1-217ENST00000639695 PP632Q6XCG6 107 aa3.2□□□□□ -1.9
RFC1-217ENST00000639695 BRD3OSQ6XYD6 125 aa3.2□□□□□ -1.9
RFC1-217ENST00000639695 TRAPPC6BQ86SZ2 158 aa3.2□□□□□ -1.9
RFC1-217ENST00000639695 DNAJC30Q96LL9 226 aa3.2□□□□□ -1.9
RFC1-217ENST00000639695 CHST6Q9GZX3 395 aa3.2□□□□□ -1.9
RFC1-217ENST00000639695 BOLA2Q9H3K6 86 aa3.2□□□□□ -1.9
RFC1-217ENST00000639695 BIN3Q9NQY0 253 aa3.2□□□□□ -1.9
RFC1-217ENST00000639695 ERGIC3Q9Y282 383 aa3.2□□□□□ -1.9
RFC1-217ENST00000639695 TONSLQ96HA7 1378 aa3.2□□□□□ -1.9
RFC1-217ENST00000639695 ERCC6Q03468 1493 aa3.2□□□□□ -1.9
RFC1-217ENST00000639695 FANCD2Q9BXW9 1451 aa3.2□□□□□ -1.9
RFC1-217ENST00000639695 ITSN2Q9NZM3 1697 aa3.2□□□□□ -1.9
RFC1-217ENST00000639695 SMARCA4P51532 1647 aa3.19□□□□□ -1.9
RFC1-217ENST00000639695 KIF1BO60333 1816 aa3.19□□□□□ -1.9
RFC1-217ENST00000639695 TRBV19A0A075B6N1 114 aa3.19□□□□□ -1.9
RFC1-217ENST00000639695 SMIM31A0A1B0GVY4 71 aa3.19□□□□□ -1.9
RFC1-217ENST00000639695 PVALEFA0A1B0GWK0 134 aa3.19□□□□□ -1.9
RFC1-217ENST00000639695 AIPO00170 330 aa3.19□□□□□ -1.9
RFC1-217ENST00000639695 CIAO1O76071 339 aa3.19□□□□□ -1.9
RFC1-217ENST00000639695 NDUFC2O95298 119 aa3.19□□□□□ -1.9
RFC1-217ENST00000639695 G6PCP35575 357 aa3.19□□□□□ -1.9
RFC1-217ENST00000639695 DEFA3P59666 94 aa3.19□□□□□ -1.9
RFC1-217ENST00000639695 YPEL3P61236 119 aaPredicted RBP3.19□□□□□ -1.9
RFC1-217ENST00000639695 TSNQ15631 228 aaKnown RBP3.19□□□□□ -1.9
RFC1-217ENST00000639695 ALX1Q15699 326 aa3.19□□□□□ -1.9
RFC1-217ENST00000639695 AKR1C8PQ5T2L2 129 aa3.19□□□□□ -1.9
RFC1-217ENST00000639695 C3orf33Q6P1S2 294 aa3.19□□□□□ -1.9
RFC1-217ENST00000639695 IDO2Q6ZQW0 420 aa3.19□□□□□ -1.9
RFC1-217ENST00000639695 MIR17HGQ75NE6 70 aa3.19□□□□□ -1.9
RFC1-217ENST00000639695 BPIFA4PQ86YQ2 179 aa3.19□□□□□ -1.9
RFC1-217ENST00000639695 CLVS1Q8IUQ0 354 aaPredicted RBP3.19□□□□□ -1.9
RFC1-217ENST00000639695 GINS4Q9BRT9 223 aa3.19□□□□□ -1.9
RFC1-217ENST00000639695 RNF122Q9H9V4 155 aa3.19□□□□□ -1.9
RFC1-217ENST00000639695 MRPL40Q9NQ50 206 aaKnown RBP3.19□□□□□ -1.9
RFC1-217ENST00000639695 SHANK2Q9UPX8 1470 aa3.19□□□□□ -1.9
RFC1-217ENST00000639695 PLXNC1O60486 1568 aa3.19□□□□□ -1.9
RFC1-217ENST00000639695 AKAP12Q02952 1782 aa3.19□□□□□ -1.9
RFC1-217ENST00000639695 MAST2Q6P0Q8 1798 aa3.19□□□□□ -1.9
RFC1-217ENST00000639695 WDR90Q96KV7 1748 aa3.19□□□□□ -1.9
RFC1-217ENST00000639695 VPS8Q8N3P4 1428 aa3.19□□□□□ -1.9
RFC1-217ENST00000639695 SYNMO15061 1565 aa3.18□□□□□ -1.9
RFC1-217ENST00000639695 DNMBPQ6XZF7 1577 aa3.18□□□□□ -1.9
RFC1-217ENST00000639695 TRAV4A0A0B4J268 109 aa3.18□□□□□ -1.9
RFC1-217ENST00000639695 RFPL4AA6NLU0 287 aa3.18□□□□□ -1.9
RFC1-217ENST00000639695 RFPL4AL1F8VTS6 287 aa3.18□□□□□ -1.9
RFC1-217ENST00000639695 H3BQF6 201 aa3.18□□□□□ -1.9
RFC1-217ENST00000639695 C1QBP02746 253 aa3.18□□□□□ -1.9
RFC1-217ENST00000639695 SPI1P17947 270 aa3.18□□□□□ -1.9
RFC1-217ENST00000639695 CDC42P60953 191 aa3.18□□□□□ -1.9
RFC1-217ENST00000639695 RAB4BP61018 213 aa3.18□□□□□ -1.9
RFC1-217ENST00000639695 NCALDP61601 193 aa3.18□□□□□ -1.9
RFC1-217ENST00000639695 SMIM15Q7Z3B0 74 aa3.18□□□□□ -1.9
RFC1-217ENST00000639695 C11orf40Q8WZ69 217 aa3.18□□□□□ -1.9
RFC1-217ENST00000639695 RMND5BQ96G75 393 aaPredicted RBP3.18□□□□□ -1.9
RFC1-217ENST00000639695 DOHHQ9BU89 302 aa3.18□□□□□ -1.9
RFC1-217ENST00000639695 TMEM70Q9BUB7 260 aa3.18□□□□□ -1.9
RFC1-217ENST00000639695 LYRM2Q9NU23 88 aaPredicted RBP3.18□□□□□ -1.9
RFC1-217ENST00000639695 CLASP1Q7Z460 1538 aa3.18□□□□□ -1.9
RFC1-217ENST00000639695 FMN1Q68DA7 1419 aa3.18□□□□□ -1.9
RFC1-217ENST00000639695 DENND4BO75064 1496 aaPredicted RBP3.17□□□□□ -1.9
RFC1-217ENST00000639695 CCDC18Q5T9S5 1454 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 RTL9Q8NET4 1388 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 IGHV1-18A0A0C4DH31 117 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 A0A1B0GVG6 124 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 EFCAB10A6NFE3 127 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 CLDN25C9JDP6 229 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 BUB1B-PAK6H3BSN5 160 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 OR2J2O76002 312 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 LGALS3P17931 250 aaKnown RBP3.17□□□□□ -1.9
RFC1-217ENST00000639695 SERPINB1P30740 379 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 PIGPP57054 158 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 GNG2P59768 71 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 GNGT1P63211 74 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 RHEBQ15382 184 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 C4orf22Q6V702 233 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 KTN1-AS1Q86SY8 53 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 HIST3H2BBQ8N257 126 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 TMEM86AQ8N2M4 240 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 SMIM20Q8N5G0 67 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 TERB2Q8NHR7 220 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 PBDC1Q9BVG4 233 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 PCBD2Q9H0N5 130 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 PRNDQ9UKY0 176 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 SSR3Q9UNL2 185 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 RPL26L1Q9UNX3 145 aaKnown RBP3.17□□□□□ -1.9
RFC1-217ENST00000639695 UFC1Q9Y3C8 167 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 TOPBP1Q92547 1522 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 DOCK3Q8IZD9 2030 aa3.17□□□□□ -1.9
RFC1-217ENST00000639695 SCN9AQ15858 1988 aa3.16□□□□□ -1.9
RFC1-217ENST00000639695 SCN10AQ9Y5Y9 1956 aa3.16□□□□□ -1.9
RFC1-217ENST00000639695 LAMC1P11047 1609 aa3.16□□□□□ -1.9
RFC1-217ENST00000639695 TRBV10-2A0A0K0K1G8 114 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms