RNA–Protein interactions for RNA: ENST00000635647.1

PTBP1-221, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-221ENST00000635647 MOSP00540 346 aa11.9□□□□□ -0.5
PTBP1-221ENST00000635647 RBP4P02753 201 aa11.9□□□□□ -0.5
PTBP1-221ENST00000635647 GCHFRP30047 84 aa11.9□□□□□ -0.5
PTBP1-221ENST00000635647 OR9G1Q8NH87 305 aa11.9□□□□□ -0.5
PTBP1-221ENST00000635647 NAA38Q9BRA0 125 aaKnown RBP11.9□□□□□ -0.5
PTBP1-221ENST00000635647 HCFC1P51610 2035 aa11.9□□□□□ -0.5
PTBP1-221ENST00000635647 RBFOX2O43251 390 aaKnown RBP eCLIP11.9□□□□□ -0.515e-9■■■□□ 15.7
PTBP1-221ENST00000635647 RPEL1Q2QD12 228 aa11.9□□□□□ -0.51
PTBP1-221ENST00000635647 OR2T6Q8NHC8 308 aa11.9□□□□□ -0.51
PTBP1-221ENST00000635647 RAB9BQ9NP90 201 aa11.9□□□□□ -0.51
PTBP1-221ENST00000635647 ZNF355PQ9NSJ1 428 aa11.9□□□□□ -0.51
PTBP1-221ENST00000635647 TNRC6AQ8NDV7 1962 aaKnown RBP11.9□□□□□ -0.51
PTBP1-221ENST00000635647 NUDT3O95989 172 aa11.89□□□□□ -0.51
PTBP1-221ENST00000635647 TNFRSF1AP19438 455 aa11.89□□□□□ -0.51
PTBP1-221ENST00000635647 UBE2V1Q13404 147 aa11.89□□□□□ -0.51
PTBP1-221ENST00000635647 DAZAP1Q96EP5 407 aaKnown RBP11.89□□□□□ -0.51
PTBP1-221ENST00000635647 RNASE7Q9H1E1 156 aaKnown RBP11.89□□□□□ -0.51
PTBP1-221ENST00000635647 GFRA3O60609 400 aa11.89□□□□□ -0.51
PTBP1-221ENST00000635647 VENTXO95231 258 aa11.89□□□□□ -0.51
PTBP1-221ENST00000635647 IGKV1-16P04430 117 aa11.89□□□□□ -0.51
PTBP1-221ENST00000635647 PSG1P11464 419 aa11.89□□□□□ -0.51
PTBP1-221ENST00000635647 ZNF137PP52743 207 aa11.89□□□□□ -0.51
PTBP1-221ENST00000635647 LCN2P80188 198 aa11.89□□□□□ -0.51
PTBP1-221ENST00000635647 FAM90A1Q86YD7 464 aa11.89□□□□□ -0.51
PTBP1-221ENST00000635647 MMD2Q8IY49 270 aa11.89□□□□□ -0.51
PTBP1-221ENST00000635647 PRO3102Q9H379 93 aa11.89□□□□□ -0.51
PTBP1-221ENST00000635647 GNB4Q9HAV0 340 aa11.89□□□□□ -0.51
PTBP1-221ENST00000635647 YTHDF2Q9Y5A9 579 aaKnown RBP11.89□□□□□ -0.51
PTBP1-221ENST00000635647 K7EM74 188 aa11.89□□□□□ -0.51
PTBP1-221ENST00000635647 PROP1O75360 226 aa11.89□□□□□ -0.51
PTBP1-221ENST00000635647 HSPE1P61604 102 aaKnown RBP11.89□□□□□ -0.51
PTBP1-221ENST00000635647 KRTCAP3Q53RY4 240 aa11.89□□□□□ -0.51
PTBP1-221ENST00000635647 DYSFO75923 2080 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 USP9YO00507 2555 aaPredicted RBP11.88□□□□□ -0.51
PTBP1-221ENST00000635647 IGHV3OR16-8A0A075B7F1 116 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 TRAV5A0A0B4J249 113 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 CSN3P07498 182 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 NPIPB3Q92617 1050 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 MCRIP2Q9BUT9 160 aaKnown RBP11.88□□□□□ -0.51
PTBP1-221ENST00000635647 ONECUT1Q9UBC0 465 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 MYO9AB2RTY4 2548 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 AHRRA9YTQ3 701 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 C15orf65H3BRN8 121 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 MPDU1O75352 247 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 MMP23AO75900 390 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 LINC00869P0C866 280 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 EFNB3Q15768 340 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 CT45A1Q5HYN5 189 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 TPTE2P1Q5T6R2 138 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 OR5B3Q8NH48 314 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 CT45A3Q8NHU0 189 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 IGFBPL1Q8WX77 278 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 FLYWCH2Q96CP2 140 aaKnown RBP11.88□□□□□ -0.51
PTBP1-221ENST00000635647 NABP2Q9BQ15 211 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 PMCHL2Q9BQD1 86 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 C20orf144Q9BQM9 153 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 TNRC18O15417 2968 aaPredicted RBP11.88□□□□□ -0.51
PTBP1-221ENST00000635647 SRRM5B3KS81 715 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 C16orf97H3BN30 126 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 HYPMO75409 117 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 SLC25A5P05141 298 aaKnown RBP11.88□□□□□ -0.51
PTBP1-221ENST00000635647 LRRC10Q5BKY1 277 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 ZNF841Q6ZN19 808 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 ELOVL5Q9NYP7 299 aa11.88□□□□□ -0.51
PTBP1-221ENST00000635647 TIMP3P35625 211 aa11.87□□□□□ -0.51
PTBP1-221ENST00000635647 Q8TCH9 128 aa11.87□□□□□ -0.51
PTBP1-221ENST00000635647 TP73-AS1Q9UF72 201 aa11.87□□□□□ -0.51
PTBP1-221ENST00000635647 ZFYVE26Q68DK2 2539 aa11.87□□□□□ -0.51
PTBP1-221ENST00000635647 TAS2R45P59539 299 aa11.87□□□□□ -0.51
PTBP1-221ENST00000635647 LYZP61626 148 aa11.87□□□□□ -0.51
PTBP1-221ENST00000635647 ZNF474Q6S9Z5 364 aaPredicted RBP11.87□□□□□ -0.51
PTBP1-221ENST00000635647 PRR7Q8TB68 274 aa11.87□□□□□ -0.51
PTBP1-221ENST00000635647 IFI27L2Q9H2X8 130 aa11.87□□□□□ -0.51
PTBP1-221ENST00000635647 LY6HO94772 140 aa11.87□□□□□ -0.51
PTBP1-221ENST00000635647 GPR6P46095 362 aaPredicted RBP11.87□□□□□ -0.51
PTBP1-221ENST00000635647 RPL24P83731 157 aaKnown RBP11.87□□□□□ -0.51
PTBP1-221ENST00000635647 MSMPQ1L6U9 139 aa11.87□□□□□ -0.51
PTBP1-221ENST00000635647 COA6Q5JTJ3 125 aaKnown RBP11.87□□□□□ -0.51
PTBP1-221ENST00000635647 SP5Q6BEB4 398 aaPredicted RBP11.87□□□□□ -0.51
PTBP1-221ENST00000635647 AMMECR1LQ6DCA0 310 aa11.87□□□□□ -0.51
PTBP1-221ENST00000635647 NUDT11Q96G61 164 aa11.87□□□□□ -0.51
PTBP1-221ENST00000635647 MRPL20Q9BYC9 149 aaKnown RBP11.87□□□□□ -0.51
PTBP1-221ENST00000635647 HILPDAQ9Y5L2 63 aa11.87□□□□□ -0.51
PTBP1-221ENST00000635647 OR2D3Q8NGH3 330 aa11.86□□□□□ -0.51
PTBP1-221ENST00000635647 LINC00479Q96M42 142 aa11.86□□□□□ -0.51
PTBP1-221ENST00000635647 ZFHX4Q86UP3 3567 aa11.86□□□□□ -0.51
PTBP1-221ENST00000635647 PIEZO1Q92508 2521 aa11.86□□□□□ -0.51
PTBP1-221ENST00000635647 K7ERU9 68 aa11.86□□□□□ -0.51
PTBP1-221ENST00000635647 YPEL1O60688 119 aa11.86□□□□□ -0.51
PTBP1-221ENST00000635647 STAG3L2P0CL84 134 aa11.86□□□□□ -0.51
PTBP1-221ENST00000635647 STAG3L3P0CL85 134 aa11.86□□□□□ -0.51
PTBP1-221ENST00000635647 PYYP10082 97 aa11.86□□□□□ -0.51
PTBP1-221ENST00000635647 USF1P22415 310 aaPredicted RBP11.86□□□□□ -0.51
PTBP1-221ENST00000635647 C19orf35Q6ZS72 473 aa11.86□□□□□ -0.51
PTBP1-221ENST00000635647 C1orf174Q8IYL3 243 aa11.86□□□□□ -0.51
PTBP1-221ENST00000635647 LINC01560Q8TB33 94 aa11.86□□□□□ -0.51
PTBP1-221ENST00000635647 YPEL2Q96QA6 119 aa11.86□□□□□ -0.51
PTBP1-221ENST00000635647 ASCL2Q99929 193 aa11.86□□□□□ -0.51
PTBP1-221ENST00000635647 TMSB15BA0A087X1C1 80 aa11.85□□□□□ -0.51
PTBP1-221ENST00000635647 CENPWQ5EE01 88 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms