RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 IGLV7-46A0A075B6I9 117 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 TRAV9-1A0A075B6T8 112 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 TRAV27A0A087WT01 109 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 IGHV7-81A0A0B4J1V7 117 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 IGHV1-58A0A0C4DH39 117 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 A0A1B0GVY2 172 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 ZNF727A8MUV8 499 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 KRTAP16-1A8MUX0 517 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 IGLL5B9A064 214 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 C9JQL5 133 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 G3V3Q6 166 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 M0R1X1 148 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 COX7A2LO14548 114 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 ZNF73O43830 326 aaPredicted RBP2.15□□□□□ -2.07
PSPC1-208ENST00000635562 COX7A2P2O60397 106 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 HLA-DQB1P01920 261 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 LINC00869P0C866 280 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 GZMBP10144 247 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 IL3RAP26951 378 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 SDC2P34741 201 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 NMUP48645 174 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 NUDT2P50583 147 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 DAPP51397 102 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 TIMM10P62072 90 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 GNB2P62879 340 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 EIF5AP63241 154 aaKnown RBP2.15□□□□□ -2.07
PSPC1-208ENST00000635562 KLRD1Q13241 179 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 DIAPH2-AS1Q14236 149 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 RBMY1FQ15415 496 aaKnown RBP2.15□□□□□ -2.07
PSPC1-208ENST00000635562 RRN3P1Q2M238 152 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 EIF5AL1Q6IS14 154 aaKnown RBP2.15□□□□□ -2.07
PSPC1-208ENST00000635562 C22orf39Q6P5X5 142 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 SLC25A34Q6PIV7 304 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 LCA10Q71F78 164 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 H2AFVQ71UI9 128 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 SSX8Q7RTT4 187 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 AAED1Q7RTV5 226 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 TRAPPC6BQ86SZ2 158 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 MDP1Q86V88 176 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 ZNF584Q8IVC4 421 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 SVBPQ8N300 66 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 TEX29Q8N6K0 151 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 ZNF709Q8N972 641 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 CSNK1G2-AS1Q8NCQ2 148 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 DCANP1Q8TF63 244 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 TWIST2Q8WVJ9 160 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 DPH3Q96FX2 82 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 ZC2HC1AQ96GY0 325 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 LINC00479Q96M42 142 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 C18orf15Q96N68 181 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 YPEL4Q96NS1 127 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 DPY30Q9C005 99 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 TUBA4BQ9H853 241 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 CA10Q9NS85 328 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 ZNF586Q9NXT0 402 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 MARCOQ9UEW3 520 aaPredicted RBP2.15□□□□□ -2.07
PSPC1-208ENST00000635562 RNF11Q9Y3C5 154 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 MROH1Q8NDA8 1641 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 CC2D2AQ9P2K1 1620 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 EPRSP07814 1512 aaKnown RBP2.15□□□□□ -2.07
PSPC1-208ENST00000635562 CASKIN1Q8WXD9 1431 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 HCFC1P51610 2035 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 PCNX3Q9H6A9 2034 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 MYLKQ15746 1914 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 ADGRB1O14514 1584 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 DIP2BQ9P265 1576 aa2.15□□□□□ -2.07
PSPC1-208ENST00000635562 MYO5CQ9NQX4 1742 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 RGPD3A6NKT7 1758 aaPredicted RBP2.14□□□□□ -2.07
PSPC1-208ENST00000635562 STRCQ7RTU9 1775 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 TRBV20OR9-2A0A075B6H5 130 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 IGHV3OR16-10A0A075B7F0 116 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 IGHV4-30-2A0A087WSY4 118 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 TCRBV3S1A0A5B6 114 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 COLCA2A8K830 154 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 M0R378 163 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 UBE2L6O14933 153 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 RER1O15258 196 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 SOCS1O15524 211 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 OR2T1O43869 369 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 EDF1O60869 148 aaKnown RBP2.14□□□□□ -2.07
PSPC1-208ENST00000635562 NAPSAO96009 420 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 LTAP01374 205 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 IGLV2-8P01709 118 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 IGHV3-48P01763 117 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 IFITM1P13164 125 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 ZNF14P17017 642 aaPredicted RBP2.14□□□□□ -2.07
PSPC1-208ENST00000635562 NFYBP25208 207 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 CA7P43166 264 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 RPL23P62829 140 aaKnown RBP2.14□□□□□ -2.07
PSPC1-208ENST00000635562 GNGT1P63211 74 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 CRADDP78560 199 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 HES1Q14469 280 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 PEA15Q15121 130 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 PRR4Q16378 134 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 IQCJQ1A5X6 159 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 C14orf177Q52M58 125 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 MRPL2Q5T653 305 aaKnown RBP2.14□□□□□ -2.07
PSPC1-208ENST00000635562 HES3Q5TGS1 186 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 Q6AWC8 147 aa2.14□□□□□ -2.07
PSPC1-208ENST00000635562 EBLN2Q6P2I7 272 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms