RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 LINC00854A0A1B0GVQ3 168 aa-0.05□□□□□ -2.42
SRP54-214ENST00000630962 CALUO43852 315 aaPredicted RBP-0.05□□□□□ -2.42
SRP54-214ENST00000630962 NDUFS6O75380 124 aaKnown RBP-0.05□□□□□ -2.42
SRP54-214ENST00000630962 IGKV1-5P01602 117 aa-0.05□□□□□ -2.42
SRP54-214ENST00000630962 OCM2P0CE71 109 aa-0.05□□□□□ -2.42
SRP54-214ENST00000630962 MGST1P10620 155 aaKnown RBP-0.05□□□□□ -2.42
SRP54-214ENST00000630962 HBA1P69905 142 aa-0.05□□□□□ -2.42
SRP54-214ENST00000630962 RNASE10Q5GAN6 216 aaKnown RBP-0.05□□□□□ -2.42
SRP54-214ENST00000630962 CLVS1Q8IUQ0 354 aaPredicted RBP-0.05□□□□□ -2.42
SRP54-214ENST00000630962 TERB2Q8NHR7 220 aa-0.05□□□□□ -2.42
SRP54-214ENST00000630962 DNAJC9Q8WXX5 260 aa-0.05□□□□□ -2.42
SRP54-214ENST00000630962 MEGF8Q7Z7M0 2845 aa-0.05□□□□□ -2.42
SRP54-214ENST00000630962 IGLV3-32A0A0A0MS00 114 aa-0.06□□□□□ -2.42
SRP54-214ENST00000630962 PQLC2LA1A4F0 135 aa-0.06□□□□□ -2.42
SRP54-214ENST00000630962 CCL25O15444 150 aa-0.06□□□□□ -2.42
SRP54-214ENST00000630962 DNAL4O96015 105 aa-0.06□□□□□ -2.42
SRP54-214ENST00000630962 OR5G3P0C626 314 aa-0.06□□□□□ -2.42
SRP54-214ENST00000630962 Q6ZS92 163 aa-0.06□□□□□ -2.42
SRP54-214ENST00000630962 GRINAQ7Z429 371 aa-0.06□□□□□ -2.42
SRP54-214ENST00000630962 TRAPPC6BQ86SZ2 158 aa-0.06□□□□□ -2.42
SRP54-214ENST00000630962 IMP4Q96G21 291 aaKnown RBP-0.06□□□□□ -2.42
SRP54-214ENST00000630962 PRTFDC1Q9NRG1 225 aa-0.06□□□□□ -2.42
SRP54-214ENST00000630962 FGFR1OP2Q9NVK5 253 aa-0.06□□□□□ -2.42
SRP54-214ENST00000630962 ERGIC3Q9Y282 383 aa-0.06□□□□□ -2.42
SRP54-214ENST00000630962 LSM5Q9Y4Y9 91 aaKnown RBP-0.06□□□□□ -2.42
SRP54-214ENST00000630962 ASH1LQ9NR48 2969 aaKnown RBP-0.06□□□□□ -2.42
SRP54-214ENST00000630962 MYO3BQ8WXR4 1341 aa-0.07□□□□□ -2.42
SRP54-214ENST00000630962 ASCC3Q8N3C0 2202 aaKnown RBP-0.07□□□□□ -2.42
SRP54-214ENST00000630962 A0A0A6YYH2 397 aa-0.07□□□□□ -2.42
SRP54-214ENST00000630962 A0A0D9SG42 100 aa-0.07□□□□□ -2.42
SRP54-214ENST00000630962 TRBV6-4A0A1B0GX49 114 aa-0.07□□□□□ -2.42
SRP54-214ENST00000630962 C7orf71A4D174 169 aa-0.07□□□□□ -2.42
SRP54-214ENST00000630962 A6NJ64 397 aa-0.07□□□□□ -2.42
SRP54-214ENST00000630962 CXCR6O00574 342 aa-0.07□□□□□ -2.42
SRP54-214ENST00000630962 SLC16A4O15374 487 aa-0.07□□□□□ -2.42
SRP54-214ENST00000630962 KRTAP2-3P0C7H8 128 aa-0.07□□□□□ -2.42
SRP54-214ENST00000630962 MLLT11Q13015 90 aaPredicted RBP-0.07□□□□□ -2.42
SRP54-214ENST00000630962 TOMM6Q96B49 74 aa-0.07□□□□□ -2.42
SRP54-214ENST00000630962 GPR146Q96CH1 333 aa-0.07□□□□□ -2.42
SRP54-214ENST00000630962 KRTAP2-4Q9BYR9 128 aa-0.07□□□□□ -2.42
SRP54-214ENST00000630962 KRTAP2-1Q9BYU5 128 aa-0.07□□□□□ -2.42
SRP54-214ENST00000630962 IMP3Q9NV31 184 aaKnown RBP-0.07□□□□□ -2.42
SRP54-214ENST00000630962 KDM6AO15550 1401 aaPredicted RBP-0.07□□□□□ -2.42
SRP54-214ENST00000630962 COL7A1Q02388 2944 aa-0.07□□□□□ -2.42
SRP54-214ENST00000630962 FXYD6P3P58550 94 aa-0.08□□□□□ -2.42
SRP54-214ENST00000630962 OR52E6Q96RD3 313 aa-0.08□□□□□ -2.42
SRP54-214ENST00000630962 NIPSNAP1Q9BPW8 284 aa-0.08□□□□□ -2.42
SRP54-214ENST00000630962 C14orf132Q9NPU4 83 aa-0.08□□□□□ -2.42
SRP54-214ENST00000630962 JPT1Q9UK76 154 aa-0.08□□□□□ -2.42
SRP54-214ENST00000630962 TNCP24821 2201 aa-0.08□□□□□ -2.42
SRP54-214ENST00000630962 SBF1O95248 1867 aa-0.08□□□□□ -2.42
SRP54-214ENST00000630962 SCN3AQ9NY46 2000 aa-0.09□□□□□ -2.42
SRP54-214ENST00000630962 C9orf84Q5VXU9 1444 aa-0.09□□□□□ -2.42
SRP54-214ENST00000630962 TRAV9-1A0A075B6T8 112 aa-0.09□□□□□ -2.42
SRP54-214ENST00000630962 DPRXA6NFQ7 191 aa-0.09□□□□□ -2.42
SRP54-214ENST00000630962 LRRN3E7EW58 273 aa-0.09□□□□□ -2.42
SRP54-214ENST00000630962 NUPR1O60356 82 aa-0.09□□□□□ -2.42
SRP54-214ENST00000630962 S100A4P26447 101 aaKnown RBP-0.09□□□□□ -2.42
SRP54-214ENST00000630962 UBE2G2P60604 165 aa-0.09□□□□□ -2.42
SRP54-214ENST00000630962 YPEL3P61236 119 aaPredicted RBP-0.09□□□□□ -2.42
SRP54-214ENST00000630962 PMAIP1Q13794 54 aa-0.09□□□□□ -2.42
SRP54-214ENST00000630962 C20orf196Q8IYI0 205 aa-0.09□□□□□ -2.42
SRP54-214ENST00000630962 OR13D1Q8NGV5 346 aa-0.09□□□□□ -2.42
SRP54-214ENST00000630962 OR10AC1Q8NH08 325 aa-0.09□□□□□ -2.42
SRP54-214ENST00000630962 H1FXQ92522 213 aaKnown RBP-0.09□□□□□ -2.42
SRP54-214ENST00000630962 RAB8BQ92930 207 aa-0.09□□□□□ -2.42
SRP54-214ENST00000630962 FBXL12Q9NXK8 326 aa-0.09□□□□□ -2.42
SRP54-214ENST00000630962 USE1Q9NZ43 259 aa-0.09□□□□□ -2.42
SRP54-214ENST00000630962 EPDR1Q9UM22 224 aa-0.09□□□□□ -2.42
SRP54-214ENST00000630962 TNFSF18Q9UNG2 199 aa-0.09□□□□□ -2.42
SRP54-214ENST00000630962 ZNF106Q9H2Y7 1883 aaKnown RBP-0.1□□□□□ -2.42
SRP54-214ENST00000630962 TNS3Q68CZ2 1445 aa-0.1□□□□□ -2.43
SRP54-214ENST00000630962 TLCD2A6NGC4 264 aa-0.1□□□□□ -2.43
SRP54-214ENST00000630962 M0QZ92 97 aa-0.1□□□□□ -2.43
SRP54-214ENST00000630962 CCL16O15467 120 aa-0.1□□□□□ -2.43
SRP54-214ENST00000630962 DCTN3O75935 186 aa-0.1□□□□□ -2.43
SRP54-214ENST00000630962 HLA-DRB1P01911 266 aa-0.1□□□□□ -2.43
SRP54-214ENST00000630962 BLVRAP53004 296 aa-0.1□□□□□ -2.43
SRP54-214ENST00000630962 AP2S1P53680 142 aaPredicted RBP-0.1□□□□□ -2.43
SRP54-214ENST00000630962 ATOH7Q8N100 152 aa-0.1□□□□□ -2.43
SRP54-214ENST00000630962 LINC00301Q8NCQ3 95 aa-0.1□□□□□ -2.43
SRP54-214ENST00000630962 TSPAN32Q96QS1 320 aa-0.1□□□□□ -2.43
SRP54-214ENST00000630962 UPF3BQ9BZI7 483 aaKnown RBP-0.1□□□□□ -2.43
SRP54-214ENST00000630962 C6orf62Q9GZU0 229 aaPredicted RBP-0.1□□□□□ -2.43
SRP54-214ENST00000630962 TLNRD1Q9H1K6 362 aa-0.1□□□□□ -2.43
SRP54-214ENST00000630962 OSTCQ9NRP0 149 aa-0.1□□□□□ -2.43
SRP54-214ENST00000630962 TMEM56-RWDD3S4R434 201 aa-0.1□□□□□ -2.43
SRP54-214ENST00000630962 TAF1LQ8IZX4 1826 aa-0.1□□□□□ -2.43
SRP54-214ENST00000630962 IGHV1-58A0A0C4DH39 117 aa-0.11□□□□□ -2.43
SRP54-214ENST00000630962 K7EIL1 84 aa-0.11□□□□□ -2.43
SRP54-214ENST00000630962 PSMD12O00232 456 aaPredicted RBP-0.11□□□□□ -2.43
SRP54-214ENST00000630962 COX5BP10606 129 aa-0.11□□□□□ -2.43
SRP54-214ENST00000630962 KDELR1P24390 212 aa-0.11□□□□□ -2.43
SRP54-214ENST00000630962 ANP32AP39687 249 aaKnown RBP-0.11□□□□□ -2.43
SRP54-214ENST00000630962 PSME3P61289 254 aa-0.11□□□□□ -2.43
SRP54-214ENST00000630962 SPRNQ5BIV9 151 aa-0.11□□□□□ -2.43
SRP54-214ENST00000630962 KRTAP26-1Q6PEX3 210 aa-0.11□□□□□ -2.43
SRP54-214ENST00000630962 TMEM254Q8TBM7 123 aa-0.11□□□□□ -2.43
SRP54-214ENST00000630962 C20orf27Q9GZN8 174 aa-0.11□□□□□ -2.43
SRP54-214ENST00000630962 DRC3Q9H069 523 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms