RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 ZNF506Q5JVG8 444 aa2.74□□□□□ -1.97
LIG4-205ENST00000614526 COMMD1Q8N668 190 aa2.74□□□□□ -1.97
LIG4-205ENST00000614526 TEX45Q8NA69 505 aa2.74□□□□□ -1.97
LIG4-205ENST00000614526 CFHR4Q92496 578 aa2.74□□□□□ -1.97
LIG4-205ENST00000614526 DERL1Q9BUN8 251 aa2.74□□□□□ -1.97
LIG4-205ENST00000614526 SIRPDQ9H106 197 aa2.74□□□□□ -1.97
LIG4-205ENST00000614526 LSM4Q9Y4Z0 139 aaKnown RBP2.74□□□□□ -1.97
LIG4-205ENST00000614526 TIMM9Q9Y5J7 89 aa2.74□□□□□ -1.97
LIG4-205ENST00000614526 DMRT1Q9Y5R6 373 aa2.74□□□□□ -1.97
LIG4-205ENST00000614526 TEX15Q9BXT5 2789 aa2.74□□□□□ -1.97
LIG4-205ENST00000614526 CENPVL3A0A0U1RRI6 287 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 BTBD17A6NE02 478 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 C11orf94C9JXX5 98 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 MBP02144 154 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 LINC00869P0C866 280 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 IGHV4-38-2P0DP08 117 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 SUB1P53999 127 aaKnown RBP eCLIP2.73□□□□□ -1.97
LIG4-205ENST00000614526 CX3CL1P78423 397 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 NDPQ00604 133 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 PAX2Q02962 417 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 ADIRFQ15847 76 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 KHDC3LQ587J8 217 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 C10orf91Q5T1B1 145 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 ASPHD1Q5U4P2 390 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 FAM71F2Q6NXP2 309 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 ZNF343Q6P1L6 599 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 TMEM144Q7Z5S9 345 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 CENPVQ7Z7K6 275 aaPredicted RBP2.73□□□□□ -1.97
LIG4-205ENST00000614526 FAM24BQ8N5W8 94 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 NECAP1Q8NC96 275 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 OR1B1Q8NGR6 318 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 C10orf105Q8TEF2 133 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 TMEM37Q8WXS4 190 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 NIPSNAP3BQ9BS92 247 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 C7orf69Q9H7B7 122 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 ZNF355PQ9NSJ1 428 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 VAX2Q9UIW0 290 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 SETD2Q9BYW2 2564 aaPredicted RBP2.73□□□□□ -1.97
LIG4-205ENST00000614526 ODF3BA8MYP8 253 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 TEX22C9J3V5 150 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 NDUFB4O95168 129 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 FSTL3O95633 263 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 IFNA1P01562 189 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 CRYGBP07316 175 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 PYYP10082 97 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 MEF2BQ02080 365 aaPredicted RBP2.73□□□□□ -1.97
LIG4-205ENST00000614526 ECSCRQ19T08 205 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 FAM90A2PQ658T7 463 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 DPPA3Q6W0C5 159 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 RBMS3Q6XE24 437 aaKnown RBP2.73□□□□□ -1.97
LIG4-205ENST00000614526 SPNS3Q6ZMD2 512 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 OR2T10Q8NGZ9 312 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 OR4X1Q8NH49 305 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 C2CD4CQ8TF44 421 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 SGK494Q96LW2 274 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 SMIM7Q9BQ49 75 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 TMUB1Q9BVT8 246 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 HIF1ANQ9NWT6 349 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 SLC45A2Q9UMX9 530 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 APCP25054 2843 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 TRAV1-1A0A0B4J248 108 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 A0A0U1RQK1 487 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 MDFIC2A0A1B0GVS7 189 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 NPFFO15130 113 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 MPDU1O75352 247 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 AVPP01185 164 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 NPPCP23582 126 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 C5orf64Q2M2E5 130 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 CYP2G1PQ6ZSU1 146 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 OR4A5Q8NH83 315 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 BLNKQ8WV28 456 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 MS4A10Q96PG2 267 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 HSPB9Q9BQS6 159 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 GGACTQ9BVM4 153 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 PARD6GQ9BYG4 376 aaPredicted RBP2.73□□□□□ -1.97
LIG4-205ENST00000614526 RPH3ALQ9UNE2 315 aa2.73□□□□□ -1.97
LIG4-205ENST00000614526 YTHDF2Q9Y5A9 579 aaKnown RBP2.73□□□□□ -1.97
LIG4-205ENST00000614526 ITPR2Q14571 2701 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 IGKV1D-37A0A075B6S9 117 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 RNF223E7ERA6 249 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 G3V318 75 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 COX7A2P2O60397 106 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 OR2J3O76001 311 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 GCHFRP30047 84 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 RPL29P47914 159 aaKnown RBP2.72□□□□□ -1.97
LIG4-205ENST00000614526 UBE2E1P51965 193 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 LYZP61626 148 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 RHOBP62745 196 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 PRR20EP86478 221 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 PRR20CP86479 221 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 PRR20DP86480 221 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 PRR20BP86481 221 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 PRR20AP86496 221 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 BSXQ3C1V8 233 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 SSX3Q99909 188 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 PARLQ9H300 379 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 SCO2A0A1W2PP80 73 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 OR2C1O95371 312 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 LY86O95711 162 aa2.72□□□□□ -1.97
LIG4-205ENST00000614526 TGFAP01135 160 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms