RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 H1FXQ92522 213 aaKnown RBP1.54□□□□□ -2.16
SCAMP1-205ENST00000614488 TOMM6Q96B49 74 aa1.54□□□□□ -2.16
SCAMP1-205ENST00000614488 ZC2HC1AQ96GY0 325 aa1.54□□□□□ -2.16
SCAMP1-205ENST00000614488 CAPZA3Q96KX2 299 aa1.54□□□□□ -2.16
SCAMP1-205ENST00000614488 CARD19Q96LW7 228 aa1.54□□□□□ -2.16
SCAMP1-205ENST00000614488 CGREF1Q99674 301 aa1.54□□□□□ -2.16
SCAMP1-205ENST00000614488 HSPB9Q9BQS6 159 aa1.54□□□□□ -2.16
SCAMP1-205ENST00000614488 VPS25Q9BRG1 176 aa1.54□□□□□ -2.16
SCAMP1-205ENST00000614488 DOHHQ9BU89 302 aa1.54□□□□□ -2.16
SCAMP1-205ENST00000614488 C1QTNF6Q9BXI9 259 aa1.54□□□□□ -2.16
SCAMP1-205ENST00000614488 NKX6-2Q9C056 277 aaPredicted RBP1.54□□□□□ -2.16
SCAMP1-205ENST00000614488 PBOV1Q9GZY1 135 aa1.54□□□□□ -2.16
SCAMP1-205ENST00000614488 CACYBPQ9HB71 228 aaKnown RBP1.54□□□□□ -2.16
SCAMP1-205ENST00000614488 SPANXA1Q9NS26 97 aa1.54□□□□□ -2.16
SCAMP1-205ENST00000614488 TRAPPC2LQ9UL33 140 aa1.54□□□□□ -2.16
SCAMP1-205ENST00000614488 LINC00588Q9Y4M8 146 aa1.54□□□□□ -2.16
SCAMP1-205ENST00000614488 NUBP2Q9Y5Y2 271 aa1.54□□□□□ -2.16
SCAMP1-205ENST00000614488 ABCC12Q96J65 1359 aa1.54□□□□□ -2.16
SCAMP1-205ENST00000614488 ECM29Q5VYK3 1845 aa1.54□□□□□ -2.16
SCAMP1-205ENST00000614488 NUP210Q8TEM1 1887 aaPredicted RBP1.54□□□□□ -2.16
SCAMP1-205ENST00000614488 TRGV4A0A0C4DH28 118 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 A0A1B0GV90 55 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 DUXBA0A1W2PPF3 345 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 RFPL4AA6NLU0 287 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 LINC00587B1AMM8 73 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 RFPL4AL1F8VTS6 287 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 H3BMM0 161 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 J3KT08 172 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 CHD1O14646 1710 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 LECT2O14960 151 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 SLC25A20O43772 301 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 MAPKBP1O60336 1514 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 IGKV1-5P01602 117 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 RPS4Y1P22090 263 aaKnown RBP1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 HIST1H2BOP23527 126 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 ATP6V0CP27449 155 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 HIST1H2BBP33778 126 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 CSN1S1P47710 185 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 ZNF80P51504 273 aaPredicted RBP1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 SMARCA4P51532 1647 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 POLR2HP52434 150 aaKnown RBP1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 HIST1H2BDP58876 126 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 HIST1H2BCP62807 126 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 PTPRJQ12913 1337 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 PRDM2Q13029 1718 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 HTR4Q13639 388 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 OR8G1Q15617 311 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 HIST2H2BEQ16778 126 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 SCGB2B2Q4G0G5 96 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 C10orf91Q5T1B1 145 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 AADACL3Q5VUY0 350 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 UBR2Q8IWV8 1755 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 OR10D4PQ8NGN7 298 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 DNAJC9Q8WXX5 260 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 HIST1H2BHQ93079 126 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 HIST1H2BAQ96A08 127 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 UBE2WQ96B02 151 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 HIST1H2BNQ99877 126 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 HIST1H2BMQ99879 126 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 TTTY13Q9BZ97 58 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 C20orf27Q9GZN8 174 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 OR5V1Q9UGF6 321 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 SNX12Q9UMY4 172 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 FUT9Q9Y231 359 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 U3KQK5 164 aa1.53□□□□□ -2.16
SCAMP1-205ENST00000614488 DENND4CQ5VZ89 1909 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 N4BP2Q86UW6 1770 aaPredicted RBP1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 TOP2BQ02880 1626 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 REREQ9P2R6 1566 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 IQSEC2Q5JU85 1478 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 IFT140Q96RY7 1462 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 TECPR2O15040 1411 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 UHRF1BP1Q6BDS2 1440 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 TONSLQ96HA7 1378 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 TRAV36DV7A0A075B6V5 113 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 A0A087WUU8 490 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 LOC102725191A0A1B0GVB3 256 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 MDFIC2A0A1B0GVS7 189 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 TMEM189A5PLL7 270 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 C19orf71A6NCJ1 209 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 GGT3PA6NGU5 568 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 H7BYZ3 331 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 SH2D1AO60880 128 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 GADD45GO95257 159 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 PRM2P04554 102 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 P0DMU3 169 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 FAM231AP0DMU4 169 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 FAM231CP0DMU5 169 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 CCL3P10147 92 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 SLC25A16P16260 332 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 GPX2P18283 190 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 OGNP20774 298 aaKnown RBP1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 S100A1P23297 94 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 S100A11P31949 105 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 LPAR6P43657 344 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 INSL3P51460 131 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 AKR1C2P52895 323 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 LYRM7Q5U5X0 104 aa1.52□□□□□ -2.17
SCAMP1-205ENST00000614488 FKBP1CQ5VVH2 108 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms