RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 SCGB2A1O75556 95 aa13.56□□□□□ -0.24
VCX3A-203ENST00000612369 FAUP35544 74 aaKnown RBP13.56□□□□□ -0.24
VCX3A-203ENST00000612369 HTR2BP41595 481 aa13.56□□□□□ -0.24
VCX3A-203ENST00000612369 CMC4P56277 68 aaPredicted RBP13.56□□□□□ -0.24
VCX3A-203ENST00000612369 ZNF600Q6ZNG1 722 aa13.56□□□□□ -0.24
VCX3A-203ENST00000612369 GPR146Q96CH1 333 aa13.56□□□□□ -0.24
VCX3A-203ENST00000612369 RNF2Q99496 336 aa13.56□□□□□ -0.24
VCX3A-203ENST00000612369 MCUBQ9NWR8 336 aa13.56□□□□□ -0.24
VCX3A-203ENST00000612369 OPRK1P41145 380 aa13.55□□□□□ -0.24
VCX3A-203ENST00000612369 TOMM20LQ6UXN7 152 aa13.55□□□□□ -0.24
VCX3A-203ENST00000612369 OR4X1Q8NH49 305 aa13.55□□□□□ -0.24
VCX3A-203ENST00000612369 HEYLQ9NQ87 328 aaPredicted RBP13.55□□□□□ -0.24
VCX3A-203ENST00000612369 CACNG5Q9UF02 275 aa13.55□□□□□ -0.24
VCX3A-203ENST00000612369 RYR3Q15413 4870 aa13.54□□□□□ -0.24
VCX3A-203ENST00000612369 PIGBOS1A0A0B4J2F0 54 aa13.54□□□□□ -0.24
VCX3A-203ENST00000612369 RPS10-NUDT3A0A1W2PQS6 291 aa13.54□□□□□ -0.24
VCX3A-203ENST00000612369 CLN5O75503 358 aa13.54□□□□□ -0.24
VCX3A-203ENST00000612369 APOC4P55056 127 aa13.54□□□□□ -0.24
VCX3A-203ENST00000612369 AP3S2P59780 193 aa13.54□□□□□ -0.24
VCX3A-203ENST00000612369 TMEM187Q14656 261 aa13.54□□□□□ -0.24
VCX3A-203ENST00000612369 ODF3L2Q3SX64 289 aa13.54□□□□□ -0.24
VCX3A-203ENST00000612369 DEDD2Q8WXF8 326 aa13.54□□□□□ -0.24
VCX3A-203ENST00000612369 TMEM230Q96A57 120 aa13.54□□□□□ -0.24
VCX3A-203ENST00000612369 UBQLN2Q9UHD9 624 aa13.54□□□□□ -0.24
VCX3A-203ENST00000612369 PUS1Q9Y606 427 aaKnown RBP eCLIP13.54□□□□□ -0.24
VCX3A-203ENST00000612369 TRAV30A0A087WSZ9 112 aa13.53□□□□□ -0.24
VCX3A-203ENST00000612369 CCDC160A6NGH7 325 aa13.53□□□□□ -0.24
VCX3A-203ENST00000612369 UBE2CO00762 179 aa13.53□□□□□ -0.24
VCX3A-203ENST00000612369 ANXA3P12429 323 aa13.53□□□□□ -0.24
VCX3A-203ENST00000612369 S100A5P33763 92 aa13.53□□□□□ -0.24
VCX3A-203ENST00000612369 PAFAH1B2P68402 229 aa13.53□□□□□ -0.24
VCX3A-203ENST00000612369 C2orf83Q53S99 150 aa13.53□□□□□ -0.24
VCX3A-203ENST00000612369 FAM90A2PQ658T7 463 aa13.53□□□□□ -0.24
VCX3A-203ENST00000612369 ZFAND6Q6FIF0 208 aa13.53□□□□□ -0.24
VCX3A-203ENST00000612369 NOXA1Q86UR1 476 aa13.53□□□□□ -0.24
VCX3A-203ENST00000612369 RNASEH2CQ8TDP1 164 aaKnown RBP13.53□□□□□ -0.24
VCX3A-203ENST00000612369 FNDC4Q9H6D8 234 aaPredicted RBP13.53□□□□□ -0.24
VCX3A-203ENST00000612369 VSIRQ9H7M9 311 aa13.53□□□□□ -0.24
VCX3A-203ENST00000612369 A0A0B4J2A0 478 aa13.52□□□□□ -0.25
VCX3A-203ENST00000612369 KIR2DL5BA0A0G2JN68 375 aa13.52□□□□□ -0.25
VCX3A-203ENST00000612369 KIR2DL5BA0A0G2JPC4 375 aa13.52□□□□□ -0.25
VCX3A-203ENST00000612369 CEBPZOSA8MTT3 80 aa13.52□□□□□ -0.25
VCX3A-203ENST00000612369 SULT1A3P0DMM9 295 aa13.52□□□□□ -0.25
VCX3A-203ENST00000612369 SULT1A4P0DMN0 295 aa13.52□□□□□ -0.25
VCX3A-203ENST00000612369 AKR1C4P17516 323 aa13.52□□□□□ -0.25
VCX3A-203ENST00000612369 SRPXP78539 464 aa13.52□□□□□ -0.25
VCX3A-203ENST00000612369 KLF9Q13886 244 aaPredicted RBP13.52□□□□□ -0.25
VCX3A-203ENST00000612369 PYDC2Q56P42 97 aa13.52□□□□□ -0.25
VCX3A-203ENST00000612369 Q6ZWC4 215 aa13.52□□□□□ -0.25
VCX3A-203ENST00000612369 KIR2DL5AQ8N109 375 aa13.52□□□□□ -0.25
VCX3A-203ENST00000612369 TOMM5Q8N4H5 51 aa13.52□□□□□ -0.25
VCX3A-203ENST00000612369 KIR2DL5BQ8NHK3 375 aa13.52□□□□□ -0.25
VCX3A-203ENST00000612369 OVOL2Q9BRP0 275 aa13.52□□□□□ -0.25
VCX3A-203ENST00000612369 TMEM231Q9H6L2 316 aa13.52□□□□□ -0.25
VCX3A-203ENST00000612369 ZFAND3Q9H8U3 227 aa13.52□□□□□ -0.25
VCX3A-203ENST00000612369 SHPKQ9UHJ6 478 aa13.52□□□□□ -0.25
VCX3A-203ENST00000612369 TP53TG1Q9Y2A0 90 aa13.52□□□□□ -0.25
VCX3A-203ENST00000612369 IGHV3-49A0A0A0MS15 119 aa13.51□□□□□ -0.25
VCX3A-203ENST00000612369 ZNF701M0R085 212 aaPredicted RBP13.51□□□□□ -0.25
VCX3A-203ENST00000612369 SLC25A4P12235 298 aa13.51□□□□□ -0.25
VCX3A-203ENST00000612369 CCR6P51684 374 aa13.51□□□□□ -0.25
VCX3A-203ENST00000612369 NMSQ5H8A3 153 aa13.51□□□□□ -0.25
VCX3A-203ENST00000612369 LGI3Q8N145 548 aa13.51□□□□□ -0.25
VCX3A-203ENST00000612369 SLC24A4Q8NFF2 622 aa13.51□□□□□ -0.25
VCX3A-203ENST00000612369 TRIM63Q969Q1 353 aa13.51□□□□□ -0.25
VCX3A-203ENST00000612369 V9GYH0 126 aa13.51□□□□□ -0.25
VCX3A-203ENST00000612369 CSMD3Q7Z407 3707 aa13.51□□□□□ -0.25
VCX3A-203ENST00000612369 A0A1B0GU03 582 aa13.5□□□□□ -0.25
VCX3A-203ENST00000612369 A0A1W2PS18 150 aa13.5□□□□□ -0.25
VCX3A-203ENST00000612369 NPPCP23582 126 aa13.5□□□□□ -0.25
VCX3A-203ENST00000612369 SUPT4H1P63272 117 aaKnown RBP13.5□□□□□ -0.25
VCX3A-203ENST00000612369 MLANAQ16655 118 aa13.5□□□□□ -0.25
VCX3A-203ENST00000612369 ETFRF1Q6IPR1 90 aa13.5□□□□□ -0.25
VCX3A-203ENST00000612369 TCF24Q7RTU0 167 aa13.5□□□□□ -0.25
VCX3A-203ENST00000612369 WFDC3Q8IUB2 231 aa13.5□□□□□ -0.25
VCX3A-203ENST00000612369 ST8SIA2Q92186 375 aa13.5□□□□□ -0.25
VCX3A-203ENST00000612369 MRPL36Q9P0J6 103 aaKnown RBP13.5□□□□□ -0.25
VCX3A-203ENST00000612369 IGHV3OR16-13A0A075B7E8 117 aa13.49□□□□□ -0.25
VCX3A-203ENST00000612369 IGHV3-74A0A0B4J1X5 117 aa13.49□□□□□ -0.25
VCX3A-203ENST00000612369 TRAV2A0A0B4J234 112 aa13.49□□□□□ -0.25
VCX3A-203ENST00000612369 SMCO1Q147U7 214 aa13.49□□□□□ -0.25
VCX3A-203ENST00000612369 TMEM128Q5BJH2 165 aa13.49□□□□□ -0.25
VCX3A-203ENST00000612369 CCDC190Q86UF4 302 aa13.49□□□□□ -0.25
VCX3A-203ENST00000612369 STPG3Q8N7X2 389 aa13.49□□□□□ -0.25
VCX3A-203ENST00000612369 SLC25A21Q9BQT8 299 aaPredicted RBP13.49□□□□□ -0.25
VCX3A-203ENST00000612369 RBM38Q9H0Z9 239 aaKnown RBP13.49□□□□□ -0.25
VCX3A-203ENST00000612369 HSPB7Q9UBY9 170 aa13.49□□□□□ -0.25
VCX3A-203ENST00000612369 U3KQ87 197 aa13.49□□□□□ -0.25
VCX3A-203ENST00000612369 DUXBA0A1W2PPF3 345 aa13.48□□□□□ -0.25
VCX3A-203ENST00000612369 IGKV1-17P01599 117 aa13.48□□□□□ -0.25
VCX3A-203ENST00000612369 NPY1RP25929 384 aa13.48□□□□□ -0.25
VCX3A-203ENST00000612369 TFPI2P48307 235 aa13.48□□□□□ -0.25
VCX3A-203ENST00000612369 ATP5IP56385 69 aaPredicted RBP13.48□□□□□ -0.25
VCX3A-203ENST00000612369 TNFRSF9Q07011 255 aa13.48□□□□□ -0.25
VCX3A-203ENST00000612369 ZNF79Q15937 498 aa13.48□□□□□ -0.25
VCX3A-203ENST00000612369 PRSS54Q6PEW0 395 aa13.48□□□□□ -0.25
VCX3A-203ENST00000612369 LYZL2Q7Z4W2 148 aa13.48□□□□□ -0.25
VCX3A-203ENST00000612369 OR1S2Q8NGQ3 325 aa13.48□□□□□ -0.25
VCX3A-203ENST00000612369 NARS2Q96I59 477 aaKnown RBP13.48□□□□□ -0.25
VCX3A-203ENST00000612369 METTL26Q96S19 204 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms