RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 ID3Q02535 119 aa14.76□□□□□ -0.05
SHKBP1-221ENST00000599833 TATDN3Q17R31 274 aa14.76□□□□□ -0.05
SHKBP1-221ENST00000599833 MZT2BQ6NZ67 158 aa14.76□□□□□ -0.05
SHKBP1-221ENST00000599833 NRARPQ7Z6K4 114 aa14.76□□□□□ -0.05
SHKBP1-221ENST00000599833 CACNG8Q8WXS5 425 aa14.76□□□□□ -0.05
SHKBP1-221ENST00000599833 PEMTQ9UBM1 199 aa14.76□□□□□ -0.05
SHKBP1-221ENST00000599833 LSM4Q9Y4Z0 139 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-221ENST00000599833 FOLR2P14207 255 aa14.75□□□□□ -0.05
SHKBP1-221ENST00000599833 NPY1RP25929 384 aa14.75□□□□□ -0.05
SHKBP1-221ENST00000599833 SUB1P53999 127 aaKnown RBP eCLIP14.75□□□□□ -0.05
SHKBP1-221ENST00000599833 TM4SF20Q53R12 229 aa14.75□□□□□ -0.05
SHKBP1-221ENST00000599833 Q56UQ5 140 aa14.75□□□□□ -0.05
SHKBP1-221ENST00000599833 UBAC2Q8NBM4 344 aa14.75□□□□□ -0.05
SHKBP1-221ENST00000599833 OR10C1Q96KK4 312 aa14.75□□□□□ -0.05
SHKBP1-221ENST00000599833 C15orf62A8K5M9 175 aa14.74□□□□□ -0.05
SHKBP1-221ENST00000599833 NDUFA4O00483 81 aa14.74□□□□□ -0.05
SHKBP1-221ENST00000599833 CBLN1P23435 193 aa14.74□□□□□ -0.05
SHKBP1-221ENST00000599833 OR4X1Q8NH49 305 aa14.74□□□□□ -0.05
SHKBP1-221ENST00000599833 MRAPQ8TCY5 172 aa14.74□□□□□ -0.05
SHKBP1-221ENST00000599833 RNASEH2CQ8TDP1 164 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-221ENST00000599833 ZNF431Q8TF32 576 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-221ENST00000599833 U3KQ87 197 aa14.74□□□□□ -0.05
SHKBP1-221ENST00000599833 TMEM50AO95807 157 aa14.73□□□□□ -0.05
SHKBP1-221ENST00000599833 IL5P05113 134 aa14.73□□□□□ -0.05
SHKBP1-221ENST00000599833 IAPPP10997 89 aa14.73□□□□□ -0.05
SHKBP1-221ENST00000599833 GP9P14770 177 aa14.73□□□□□ -0.05
SHKBP1-221ENST00000599833 DEFB114Q30KQ6 69 aa14.73□□□□□ -0.05
SHKBP1-221ENST00000599833 FAM106AQ4KMX7 169 aa14.73□□□□□ -0.05
SHKBP1-221ENST00000599833 MAGT1Q9H0U3 335 aa14.73□□□□□ -0.05
SHKBP1-221ENST00000599833 HIPK2Q9H2X6 1198 aa14.73□□□□□ -0.05
SHKBP1-221ENST00000599833 ZMAT5Q9UDW3 170 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-221ENST00000599833 MLXQ9UH92 298 aa14.73□□□□□ -0.05
SHKBP1-221ENST00000599833 PRSS46E5RG02 174 aa14.72□□□□□ -0.05
SHKBP1-221ENST00000599833 CLN5O75503 358 aa14.72□□□□□ -0.05
SHKBP1-221ENST00000599833 IGKV1-17P01599 117 aa14.72□□□□□ -0.05
SHKBP1-221ENST00000599833 OPRK1P41145 380 aa14.72□□□□□ -0.05
SHKBP1-221ENST00000599833 ELLP55199 621 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-221ENST00000599833 PRSS54Q6PEW0 395 aa14.72□□□□□ -0.05
SHKBP1-221ENST00000599833 TMEM116Q8NCL8 245 aa14.72□□□□□ -0.05
SHKBP1-221ENST00000599833 ZFAND3Q9H8U3 227 aa14.72□□□□□ -0.05
SHKBP1-221ENST00000599833 GAR1Q9NY12 217 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-221ENST00000599833 ZNF320A2RRD8 509 aa14.71□□□□□ -0.05
SHKBP1-221ENST00000599833 ZNF785A8K8V0 405 aa14.71□□□□□ -0.05
SHKBP1-221ENST00000599833 CCSO14618 274 aa14.71□□□□□ -0.05
SHKBP1-221ENST00000599833 SYNGR2O43760 224 aa14.71□□□□□ -0.05
SHKBP1-221ENST00000599833 CD300EQ496F6 205 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-221ENST00000599833 Q8N1Y9 231 aa14.71□□□□□ -0.05
SHKBP1-221ENST00000599833 ZBTB8BQ8NAP8 495 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-221ENST00000599833 MARVELD1Q9BSK0 173 aa14.71□□□□□ -0.05
SHKBP1-221ENST00000599833 IGHV3OR16-8A0A075B7F1 116 aa14.7□□□□□ -0.06
SHKBP1-221ENST00000599833 GNG7O60262 68 aa14.7□□□□□ -0.06
SHKBP1-221ENST00000599833 IGLC1P0CG04 106 aa14.7□□□□□ -0.06
SHKBP1-221ENST00000599833 NPBWR1P48145 328 aa14.7□□□□□ -0.06
SHKBP1-221ENST00000599833 PAX9P55771 341 aa14.7□□□□□ -0.06
SHKBP1-221ENST00000599833 POLR2GP62487 172 aaKnown RBP eCLIP14.7□□□□□ -0.06
SHKBP1-221ENST00000599833 CD69Q07108 199 aa14.7□□□□□ -0.06
SHKBP1-221ENST00000599833 UXS1Q8NBZ7 420 aa14.7□□□□□ -0.06
SHKBP1-221ENST00000599833 OR2K2Q8NGT1 345 aa14.7□□□□□ -0.06
SHKBP1-221ENST00000599833 ENKURQ8TC29 256 aa14.7□□□□□ -0.06
SHKBP1-221ENST00000599833 SELENOKQ9Y6D0 94 aa14.7□□□□□ -0.06
SHKBP1-221ENST00000599833 K7EMT4 169 aa14.69□□□□□ -0.06
SHKBP1-221ENST00000599833 NUPL2O15504 423 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-221ENST00000599833 IFNA10P01566 189 aa14.69□□□□□ -0.06
SHKBP1-221ENST00000599833 ATP5IP56385 69 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-221ENST00000599833 RELQ04864 619 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-221ENST00000599833 IL15RAQ13261 267 aa14.69□□□□□ -0.06
SHKBP1-221ENST00000599833 IAH1Q2TAA2 248 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-221ENST00000599833 TOMM20LQ6UXN7 152 aa14.69□□□□□ -0.06
SHKBP1-221ENST00000599833 C12orf45Q8N5I9 185 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-221ENST00000599833 RCL1Q9Y2P8 373 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-221ENST00000599833 UFC1Q9Y3C8 167 aa14.69□□□□□ -0.06
SHKBP1-221ENST00000599833 PMS2P5A8MQ11 134 aa14.68□□□□□ -0.06
SHKBP1-221ENST00000599833 WRBO00258 174 aa14.68□□□□□ -0.06
SHKBP1-221ENST00000599833 MED6O75586 246 aa14.68□□□□□ -0.06
SHKBP1-221ENST00000599833 IFNA21P01568 189 aa14.68□□□□□ -0.06
SHKBP1-221ENST00000599833 SLC25A4P12235 298 aa14.68□□□□□ -0.06
SHKBP1-221ENST00000599833 NKX2-1P43699 371 aaPredicted RBP14.68□□□□□ -0.06
SHKBP1-221ENST00000599833 RND2P52198 227 aa14.68□□□□□ -0.06
SHKBP1-221ENST00000599833 C11orf1Q9H5F2 150 aa14.68□□□□□ -0.06
SHKBP1-221ENST00000599833 PALMDQ9NP74 551 aa14.68□□□□□ -0.06
SHKBP1-221ENST00000599833 DAZ1Q9NQZ3 744 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-221ENST00000599833 TECRQ9NZ01 308 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-221ENST00000599833 MRPL27Q9P0M9 148 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-221ENST00000599833 IGKV1D-37A0A075B6S9 117 aa14.67□□□□□ -0.06
SHKBP1-221ENST00000599833 RPS10-NUDT3A0A1W2PQS6 291 aa14.67□□□□□ -0.06
SHKBP1-221ENST00000599833 ZNF207O43670 478 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-221ENST00000599833 SCAF4O95104 1147 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-221ENST00000599833 MBPP02686 304 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-221ENST00000599833 TIGITQ495A1 244 aa14.67□□□□□ -0.06
SHKBP1-221ENST00000599833 BTNL8Q6UX41 500 aa14.67□□□□□ -0.06
SHKBP1-221ENST00000599833 SLC16A13Q7RTY0 426 aa14.67□□□□□ -0.06
SHKBP1-221ENST00000599833 NOXA1Q86UR1 476 aa14.67□□□□□ -0.06
SHKBP1-221ENST00000599833 TMEM61Q8N0U2 210 aa14.67□□□□□ -0.06
SHKBP1-221ENST00000599833 MARC2Q969Z3 335 aa14.67□□□□□ -0.06
SHKBP1-221ENST00000599833 GAMTQ14353 236 aa14.66□□□□□ -0.06
SHKBP1-221ENST00000599833 LCN12Q6JVE5 192 aa14.66□□□□□ -0.06
SHKBP1-221ENST00000599833 ZNF600Q6ZNG1 722 aa14.66□□□□□ -0.06
SHKBP1-221ENST00000599833 NPIPB3Q92617 1050 aa14.66□□□□□ -0.06
SHKBP1-221ENST00000599833 WDR89Q96FK6 387 aaPredicted RBP14.66□□□□□ -0.06
SHKBP1-221ENST00000599833 CIB3Q96Q77 187 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms