RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 DYNLRB2Q8TF09 96 aa13.19□□□□□ -0.3
SHKBP1-203ENST00000594298 FAM110AQ9BQ89 295 aa13.19□□□□□ -0.3
SHKBP1-203ENST00000594298 WDR12Q9GZL7 423 aaKnown RBP13.19□□□□□ -0.3
SHKBP1-203ENST00000594298 HEYLQ9NQ87 328 aaPredicted RBP13.19□□□□□ -0.3
SHKBP1-203ENST00000594298 TECRQ9NZ01 308 aaKnown RBP13.19□□□□□ -0.3
SHKBP1-203ENST00000594298 IGHV3-21A0A0B4J1V1 117 aa13.18□□□□□ -0.3
SHKBP1-203ENST00000594298 ZNF320A2RRD8 509 aa13.18□□□□□ -0.3
SHKBP1-203ENST00000594298 C2orf70A6NJV1 201 aa13.18□□□□□ -0.3
SHKBP1-203ENST00000594298 LYRM1O43325 122 aa13.18□□□□□ -0.3
SHKBP1-203ENST00000594298 HTR2BP41595 481 aa13.18□□□□□ -0.3
SHKBP1-203ENST00000594298 NOXA1Q86UR1 476 aa13.18□□□□□ -0.3
SHKBP1-203ENST00000594298 TMED3Q9Y3Q3 217 aa13.18□□□□□ -0.3
SHKBP1-203ENST00000594298 OR2T8A6NH00 312 aa13.17□□□□□ -0.3
SHKBP1-203ENST00000594298 OR11H12B2RN74 326 aa13.17□□□□□ -0.3
SHKBP1-203ENST00000594298 I3L2K1 104 aa13.17□□□□□ -0.3
SHKBP1-203ENST00000594298 MT-CO2P00403 227 aa13.17□□□□□ -0.3
SHKBP1-203ENST00000594298 FOLR2P14207 255 aa13.17□□□□□ -0.3
SHKBP1-203ENST00000594298 FCGR2BP31994 310 aaPredicted RBP13.17□□□□□ -0.3
SHKBP1-203ENST00000594298 ZNF846Q147U1 533 aa13.17□□□□□ -0.3
SHKBP1-203ENST00000594298 ANKRD55Q3KP44 614 aa13.17□□□□□ -0.3
SHKBP1-203ENST00000594298 UBAC2Q8NBM4 344 aa13.17□□□□□ -0.3
SHKBP1-203ENST00000594298 DUSP18Q8NEJ0 188 aa13.17□□□□□ -0.3
SHKBP1-203ENST00000594298 OR1S1Q8NH92 325 aa13.17□□□□□ -0.3
SHKBP1-203ENST00000594298 PINX1Q96BK5 328 aaKnown RBP13.17□□□□□ -0.3
SHKBP1-203ENST00000594298 SRD5A3Q9H8P0 318 aa13.17□□□□□ -0.3
SHKBP1-203ENST00000594298 C9orf170A2RU37 121 aa13.16□□□□□ -0.3
SHKBP1-203ENST00000594298 PLA2G10O15496 165 aa13.16□□□□□ -0.3
SHKBP1-203ENST00000594298 NUPL2O15504 423 aaKnown RBP13.16□□□□□ -0.3
SHKBP1-203ENST00000594298 RNASE2P10153 161 aaKnown RBP13.16□□□□□ -0.3
SHKBP1-203ENST00000594298 SLC25A6P12236 298 aa13.16□□□□□ -0.3
SHKBP1-203ENST00000594298 NPBWR1P48145 328 aa13.16□□□□□ -0.3
SHKBP1-203ENST00000594298 C4orf46Q504U0 113 aa13.16□□□□□ -0.3
SHKBP1-203ENST00000594298 PVRIGQ6DKI7 326 aa13.16□□□□□ -0.3
SHKBP1-203ENST00000594298 COQ8AQ8NI60 647 aa13.16□□□□□ -0.3
SHKBP1-203ENST00000594298 WFDC10AQ9H1F0 79 aa13.16□□□□□ -0.3
SHKBP1-203ENST00000594298 FLVCR2Q9UPI3 526 aa13.16□□□□□ -0.3
SHKBP1-203ENST00000594298 UFC1Q9Y3C8 167 aa13.16□□□□□ -0.3
SHKBP1-203ENST00000594298 OR4E1P0C645 316 aa13.15□□□□□ -0.3
SHKBP1-203ENST00000594298 EDN2P20800 178 aa13.15□□□□□ -0.3
SHKBP1-203ENST00000594298 BTCP35070 178 aa13.15□□□□□ -0.3
SHKBP1-203ENST00000594298 ELLP55199 621 aaPredicted RBP13.15□□□□□ -0.3
SHKBP1-203ENST00000594298 RELQ04864 619 aaPredicted RBP13.15□□□□□ -0.3
SHKBP1-203ENST00000594298 TNFRSF9Q07011 255 aa13.15□□□□□ -0.3
SHKBP1-203ENST00000594298 GUCA2BQ16661 112 aa13.15□□□□□ -0.3
SHKBP1-203ENST00000594298 BSXQ3C1V8 233 aa13.15□□□□□ -0.3
SHKBP1-203ENST00000594298 MZT2BQ6NZ67 158 aa13.15□□□□□ -0.3
SHKBP1-203ENST00000594298 LYG2Q86SG7 212 aa13.15□□□□□ -0.3
SHKBP1-203ENST00000594298 MARC2Q969Z3 335 aa13.15□□□□□ -0.3
SHKBP1-203ENST00000594298 WDR89Q96FK6 387 aaPredicted RBP13.15□□□□□ -0.3
SHKBP1-203ENST00000594298 ZNF436Q9C0F3 470 aaPredicted RBP13.15□□□□□ -0.3
SHKBP1-203ENST00000594298 HSPB7Q9UBY9 170 aa13.15□□□□□ -0.3
SHKBP1-203ENST00000594298 PLECQ15149 4684 aaKnown RBP13.15□□□□□ -0.3
SHKBP1-203ENST00000594298 RPS10-NUDT3A0A1W2PQS6 291 aa13.14□□□□□ -0.31
SHKBP1-203ENST00000594298 A8MWP6 167 aa13.14□□□□□ -0.31
SHKBP1-203ENST00000594298 NDUFA4O00483 81 aa13.14□□□□□ -0.31
SHKBP1-203ENST00000594298 GNG7O60262 68 aa13.14□□□□□ -0.31
SHKBP1-203ENST00000594298 SCGB2A1O75556 95 aa13.14□□□□□ -0.31
SHKBP1-203ENST00000594298 CBLN1P23435 193 aa13.14□□□□□ -0.31
SHKBP1-203ENST00000594298 ATP5IP56385 69 aaPredicted RBP13.14□□□□□ -0.31
SHKBP1-203ENST00000594298 C2orf83Q53S99 150 aa13.14□□□□□ -0.31
SHKBP1-203ENST00000594298 SLC16A13Q7RTY0 426 aa13.14□□□□□ -0.31
SHKBP1-203ENST00000594298 SLC24A4Q8NFF2 622 aa13.14□□□□□ -0.31
SHKBP1-203ENST00000594298 U3KQ87 197 aa13.14□□□□□ -0.31
SHKBP1-203ENST00000594298 FAM90A26D6RGX4 464 aa13.13□□□□□ -0.31
SHKBP1-203ENST00000594298 MED6O75586 246 aa13.13□□□□□ -0.31
SHKBP1-203ENST00000594298 NXPH3O95157 252 aa13.13□□□□□ -0.31
SHKBP1-203ENST00000594298 IFNA21P01568 189 aa13.13□□□□□ -0.31
SHKBP1-203ENST00000594298 TCRBP04435 133 aa13.13□□□□□ -0.31
SHKBP1-203ENST00000594298 CTSGP08311 255 aa13.13□□□□□ -0.31
SHKBP1-203ENST00000594298 HOXB5P09067 269 aa13.13□□□□□ -0.31
SHKBP1-203ENST00000594298 ANXA7P20073 488 aaKnown RBP13.13□□□□□ -0.31
SHKBP1-203ENST00000594298 OPRK1P41145 380 aa13.13□□□□□ -0.31
SHKBP1-203ENST00000594298 DHRS2Q13268 280 aa13.13□□□□□ -0.31
SHKBP1-203ENST00000594298 RNASEH2CQ8TDP1 164 aaKnown RBP13.13□□□□□ -0.31
SHKBP1-203ENST00000594298 DTD1Q8TEA8 209 aa13.13□□□□□ -0.31
SHKBP1-203ENST00000594298 CHRDL1Q9BU40 450 aa13.13□□□□□ -0.31
SHKBP1-203ENST00000594298 C20orf85Q9H1P6 137 aa13.13□□□□□ -0.31
SHKBP1-203ENST00000594298 MRPL27Q9P0M9 148 aaKnown RBP13.13□□□□□ -0.31
SHKBP1-203ENST00000594298 IGHV3-35A0A0C4DH35 117 aa13.12□□□□□ -0.31
SHKBP1-203ENST00000594298 FAM240BA0A1B0GVZ2 78 aa13.12□□□□□ -0.31
SHKBP1-203ENST00000594298 F8W735 103 aaPredicted RBP13.12□□□□□ -0.31
SHKBP1-203ENST00000594298 PITX3O75364 302 aa13.12□□□□□ -0.31
SHKBP1-203ENST00000594298 IFNA10P01566 189 aa13.12□□□□□ -0.31
SHKBP1-203ENST00000594298 GGNBP1Q5YKI7 109 aa13.12□□□□□ -0.31
SHKBP1-203ENST00000594298 ETFRF1Q6IPR1 90 aa13.12□□□□□ -0.31
SHKBP1-203ENST00000594298 TMEM61Q8N0U2 210 aa13.12□□□□□ -0.31
SHKBP1-203ENST00000594298 TMEM190Q8WZ59 177 aa13.12□□□□□ -0.31
SHKBP1-203ENST00000594298 RBKSQ9H477 322 aa13.12□□□□□ -0.31
SHKBP1-203ENST00000594298 TMEM213A2RRL7 107 aa13.11□□□□□ -0.31
SHKBP1-203ENST00000594298 IGHV3-48P01763 117 aa13.11□□□□□ -0.31
SHKBP1-203ENST00000594298 NPY1RP25929 384 aa13.11□□□□□ -0.31
SHKBP1-203ENST00000594298 ADMP35318 185 aa13.11□□□□□ -0.31
SHKBP1-203ENST00000594298 UNQ9165/PRO28630Q6UXU0 137 aa13.11□□□□□ -0.31
SHKBP1-203ENST00000594298 UXS1Q8NBZ7 420 aa13.11□□□□□ -0.31
SHKBP1-203ENST00000594298 CACNG8Q8WXS5 425 aa13.11□□□□□ -0.31
SHKBP1-203ENST00000594298 ALMS1Q8TCU4 4167 aa13.1□□□□□ -0.31
SHKBP1-203ENST00000594298 TRAV30A0A087WSZ9 112 aa13.1□□□□□ -0.31
SHKBP1-203ENST00000594298 K7EMT4 169 aa13.1□□□□□ -0.31
SHKBP1-203ENST00000594298 UPK1BO75841 260 aa13.1□□□□□ -0.31
SHKBP1-203ENST00000594298 TMEM50AO95807 157 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms