RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 SLC24A4Q8NFF2 622 aa20.49■□□□□ 0.87
SMARCD2-210ENST00000584400 NEURL2Q9BR09 285 aa20.49■□□□□ 0.87
SMARCD2-210ENST00000584400 C19orf73Q9NVV2 129 aa20.49■□□□□ 0.87
SMARCD2-210ENST00000584400 C2orf83Q53S99 150 aa20.48■□□□□ 0.87
SMARCD2-210ENST00000584400 LAMTOR1Q6IAA8 161 aa20.48■□□□□ 0.87
SMARCD2-210ENST00000584400 SBSPONQ8IVN8 264 aa20.48■□□□□ 0.87
SMARCD2-210ENST00000584400 TMEM61Q8N0U2 210 aa20.48■□□□□ 0.87
SMARCD2-210ENST00000584400 LRTM2Q8N967 370 aa20.48■□□□□ 0.87
SMARCD2-210ENST00000584400 RNASEH2CQ8TDP1 164 aaKnown RBP20.48■□□□□ 0.87
SMARCD2-210ENST00000584400 WDR89Q96FK6 387 aaPredicted RBP20.48■□□□□ 0.87
SMARCD2-210ENST00000584400 SFT2D2O95562 160 aa20.47■□□□□ 0.87
SMARCD2-210ENST00000584400 IL7P13232 177 aa20.47■□□□□ 0.87
SMARCD2-210ENST00000584400 TNFRSF9Q07011 255 aa20.47■□□□□ 0.87
SMARCD2-210ENST00000584400 LINC00299Q6ZSB3 139 aa20.47■□□□□ 0.87
SMARCD2-210ENST00000584400 OR1S1Q8NH92 325 aa20.47■□□□□ 0.87
SMARCD2-210ENST00000584400 SDHCQ99643 169 aaPredicted RBP20.47■□□□□ 0.87
SMARCD2-210ENST00000584400 ZMAT4Q9H898 229 aa20.47■□□□□ 0.87
SMARCD2-210ENST00000584400 HSPB7Q9UBY9 170 aa20.47■□□□□ 0.87
SMARCD2-210ENST00000584400 TMED3Q9Y3Q3 217 aa20.47■□□□□ 0.87
SMARCD2-210ENST00000584400 NDUFB6O95139 128 aa20.46■□□□□ 0.87
SMARCD2-210ENST00000584400 PPP1R1AQ13522 171 aa20.46■□□□□ 0.87
SMARCD2-210ENST00000584400 CNPY1Q3B7I2 92 aa20.46■□□□□ 0.87
SMARCD2-210ENST00000584400 GINS3Q9BRX5 216 aa20.46■□□□□ 0.87
SMARCD2-210ENST00000584400 LINC00854A0A1B0GVQ3 168 aa20.45■□□□□ 0.86
SMARCD2-210ENST00000584400 NXPH3O95157 252 aa20.45■□□□□ 0.86
SMARCD2-210ENST00000584400 ETFRF1Q6IPR1 90 aa20.45■□□□□ 0.86
SMARCD2-210ENST00000584400 ZNF600Q6ZNG1 722 aa20.45■□□□□ 0.86
SMARCD2-210ENST00000584400 OR52B4Q8NGK2 314 aa20.45■□□□□ 0.86
SMARCD2-210ENST00000584400 OR4X1Q8NH49 305 aa20.45■□□□□ 0.86
SMARCD2-210ENST00000584400 OR10C1Q96KK4 312 aa20.45■□□□□ 0.86
SMARCD2-210ENST00000584400 U3KQ87 197 aa20.45■□□□□ 0.86
SMARCD2-210ENST00000584400 TRAV30A0A087WSZ9 112 aa20.44■□□□□ 0.86
SMARCD2-210ENST00000584400 CLN5O75503 358 aa20.44■□□□□ 0.86
SMARCD2-210ENST00000584400 SCAF4O95104 1147 aaKnown RBP20.44■□□□□ 0.86
SMARCD2-210ENST00000584400 TMEM50AO95807 157 aa20.44■□□□□ 0.86
SMARCD2-210ENST00000584400 SLC25A4P12235 298 aa20.44■□□□□ 0.86
SMARCD2-210ENST00000584400 SLC25A6P12236 298 aa20.44■□□□□ 0.86
SMARCD2-210ENST00000584400 BMI1P35226 326 aa20.44■□□□□ 0.86
SMARCD2-210ENST00000584400 ATP5IP56385 69 aaPredicted RBP20.44■□□□□ 0.86
SMARCD2-210ENST00000584400 DTD1Q8TEA8 209 aa20.44■□□□□ 0.86
SMARCD2-210ENST00000584400 SPAG8Q99932 426 aaPredicted RBP20.44■□□□□ 0.86
SMARCD2-210ENST00000584400 TRAV14DV4A0A0A6YYC5 116 aa20.43■□□□□ 0.86
SMARCD2-210ENST00000584400 IFNA10P01566 189 aa20.43■□□□□ 0.86
SMARCD2-210ENST00000584400 CD7P09564 240 aa20.43■□□□□ 0.86
SMARCD2-210ENST00000584400 NPY1RP25929 384 aa20.43■□□□□ 0.86
SMARCD2-210ENST00000584400 WWC2-AS2Q96NR7 200 aa20.43■□□□□ 0.86
SMARCD2-210ENST00000584400 FNDC4Q9H6D8 234 aaPredicted RBP20.43■□□□□ 0.86
SMARCD2-210ENST00000584400 SMPXQ9UHP9 88 aa20.43■□□□□ 0.86
SMARCD2-210ENST00000584400 IGHV3OR16-8A0A075B7F1 116 aa20.42■□□□□ 0.86
SMARCD2-210ENST00000584400 OR11H12B2RN74 326 aa20.42■□□□□ 0.86
SMARCD2-210ENST00000584400 TMEM116Q8NCL8 245 aa20.42■□□□□ 0.86
SMARCD2-210ENST00000584400 IGHV7-4-1A0A0J9YVY3 117 aa20.41■□□□□ 0.86
SMARCD2-210ENST00000584400 FAM90A26D6RGX4 464 aa20.41■□□□□ 0.86
SMARCD2-210ENST00000584400 TSPAN4O14817 238 aa20.41■□□□□ 0.86
SMARCD2-210ENST00000584400 ZNF207O43670 478 aaKnown RBP20.41■□□□□ 0.86
SMARCD2-210ENST00000584400 COQ8AQ8NI60 647 aa20.41■□□□□ 0.86
SMARCD2-210ENST00000584400 CCDC32Q9BV29 185 aa20.41■□□□□ 0.86
SMARCD2-210ENST00000584400 RBKSQ9H477 322 aa20.41■□□□□ 0.86
SMARCD2-210ENST00000584400 SELENOKQ9Y6D0 94 aa20.41■□□□□ 0.86
SMARCD2-210ENST00000584400 MED6O75586 246 aa20.4■□□□□ 0.86
SMARCD2-210ENST00000584400 TOMM20LQ6UXN7 152 aa20.4■□□□□ 0.86
SMARCD2-210ENST00000584400 RHPN1-AS1Q9BWJ2 59 aa20.4■□□□□ 0.86
SMARCD2-210ENST00000584400 PUS1Q9Y606 427 aaKnown RBP eCLIP20.4■□□□□ 0.86
SMARCD2-210ENST00000584400 C9orf170A2RU37 121 aa20.39■□□□□ 0.85
SMARCD2-210ENST00000584400 PITX3O75364 302 aa20.39■□□□□ 0.85
SMARCD2-210ENST00000584400 CD5P06127 495 aa20.39■□□□□ 0.85
SMARCD2-210ENST00000584400 S100ZQ8WXG8 99 aa20.39■□□□□ 0.85
SMARCD2-210ENST00000584400 MLANAQ16655 118 aa20.38■□□□□ 0.85
SMARCD2-210ENST00000584400 RCHY1Q96PM5 261 aa20.38■□□□□ 0.85
SMARCD2-210ENST00000584400 TM2D3Q9BRN9 247 aa20.38■□□□□ 0.85
SMARCD2-210ENST00000584400 CHEK1O14757 476 aa20.37■□□□□ 0.85
SMARCD2-210ENST00000584400 HOXB5P09067 269 aa20.37■□□□□ 0.85
SMARCD2-210ENST00000584400 OR4E1P0C645 316 aa20.37■□□□□ 0.85
SMARCD2-210ENST00000584400 C4orf46Q504U0 113 aa20.37■□□□□ 0.85
SMARCD2-210ENST00000584400 PRSS54Q6PEW0 395 aa20.37■□□□□ 0.85
SMARCD2-210ENST00000584400 DEFB125Q8N687 156 aa20.37■□□□□ 0.85
SMARCD2-210ENST00000584400 OR1S2Q8NGQ3 325 aa20.37■□□□□ 0.85
SMARCD2-210ENST00000584400 ZNF414Q96IQ9 312 aa20.37■□□□□ 0.85
SMARCD2-210ENST00000584400 CIB3Q96Q77 187 aaPredicted RBP20.37■□□□□ 0.85
SMARCD2-210ENST00000584400 TMEM231Q9H6L2 316 aa20.37■□□□□ 0.85
SMARCD2-210ENST00000584400 FLVCR2Q9UPI3 526 aa20.37■□□□□ 0.85
SMARCD2-210ENST00000584400 OR4C46A6NHA9 309 aa20.36■□□□□ 0.85
SMARCD2-210ENST00000584400 LYRM1O43325 122 aa20.36■□□□□ 0.85
SMARCD2-210ENST00000584400 IFNA21P01568 189 aa20.36■□□□□ 0.85
SMARCD2-210ENST00000584400 IFNA4P05014 189 aa20.36■□□□□ 0.85
SMARCD2-210ENST00000584400 BTCP35070 178 aa20.36■□□□□ 0.85
SMARCD2-210ENST00000584400 RPP30P78346 268 aaKnown RBP20.36■□□□□ 0.85
SMARCD2-210ENST00000584400 DHRS2Q13268 280 aa20.36■□□□□ 0.85
SMARCD2-210ENST00000584400 LYG2Q86SG7 212 aa20.36■□□□□ 0.85
SMARCD2-210ENST00000584400 SPATA25Q9BR10 227 aa20.36■□□□□ 0.85
SMARCD2-210ENST00000584400 SRD5A3Q9H8P0 318 aa20.36■□□□□ 0.85
SMARCD2-210ENST00000584400 MRPL36Q9P0J6 103 aaKnown RBP20.36■□□□□ 0.85
SMARCD2-210ENST00000584400 A6NHS1 94 aa20.35■□□□□ 0.85
SMARCD2-210ENST00000584400 RND2P52198 227 aa20.35■□□□□ 0.85
SMARCD2-210ENST00000584400 RAB11AP62491 216 aa20.35■□□□□ 0.85
SMARCD2-210ENST00000584400 HAGHQ16775 308 aa20.35■□□□□ 0.85
SMARCD2-210ENST00000584400 GGNBP1Q5YKI7 109 aa20.35■□□□□ 0.85
SMARCD2-210ENST00000584400 TMEM170AQ8WVE7 144 aa20.35■□□□□ 0.85
SMARCD2-210ENST00000584400 ZFAND3Q9H8U3 227 aa20.35■□□□□ 0.85
SMARCD2-210ENST00000584400 A0A1W2PS18 150 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms