RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 YPEL3P61236 119 aaPredicted RBP1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 SUPT4H1P63272 117 aaKnown RBP1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 BPIFA4PQ86YQ2 179 aa1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 Q8N2B8 174 aa1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 C12orf29Q8N999 325 aa1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 ZNF439Q8NDP4 499 aa1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 OR51A2Q8NGJ7 313 aa1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 GNPDA2Q8TDQ7 276 aa1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 H1FXQ92522 213 aaKnown RBP1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 C2orf50Q96LR7 162 aa1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 PRAP1Q96NZ9 151 aa1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 SIGMAR1Q99720 223 aa1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 BAIAP2Q9UQB8 552 aa1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 ERGIC3Q9Y282 383 aa1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 TOPBP1Q92547 1522 aa1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 RIC1Q4ADV7 1423 aa1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 TTC21AQ8NDW8 1320 aa1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 FAM236DA0A1B0GTK5 79 aa1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 OR7C1O76099 320 aaPredicted RBP1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 OR5F1O95221 314 aa1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 SERPINA1P01009 418 aa1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 SERPINE1P05121 402 aa1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 HTR1AP08908 422 aa1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 FAM236CP0DP71 79 aa1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 HSD11B1P28845 292 aa1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 BASP1P80723 227 aaKnown RBP1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 PLCXD2Q0VAA5 305 aa1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 KHDC3LQ587J8 217 aa1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 SPANXN5Q5MJ07 72 aa1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 C10orf55Q5SWW7 151 aa1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 DEFB128Q7Z7B8 93 aa1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 CLVS1Q8IUQ0 354 aaPredicted RBP1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 HIST3H2BBQ8N257 126 aa1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 OR4E2Q8NGC2 313 aa1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 OR4D11Q8NGI4 311 aa1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 PHB2Q99623 299 aa1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 MIXL1Q9H2W2 232 aa1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 PSTPIP2Q9H939 334 aa1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 CYSLTR1Q9Y271 337 aa1.01□□□□□ -2.25
PPP4R1-227ENST00000583988 COL4A5P29400 1685 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 SETD5Q9C0A6 1442 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 MYOFQ9NZM1 2061 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 KIF24Q5T7B8 1368 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 DLG5Q8TDM6 1919 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 C19orf84I3L1E1 186 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 OR2B3O76000 313 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 CLPSP04118 112 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 UBBP0CG47 229 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 COX6A1P12074 109 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 ERP29P30040 261 aaKnown RBP1□□□□□ -2.25
PPP4R1-227ENST00000583988 DEFA1P59665 94 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 ERVS71-1P61550 626 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 RUNX1Q01196 453 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 ZNF345Q14585 488 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 CDK5R1Q15078 307 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 C12orf74Q32Q52 190 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 LYRM7Q5U5X0 104 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 TEX36Q5VZQ5 186 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 LCN15Q6UWW0 184 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 SIGLECL1Q8N7X8 197 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 TERB2Q8NHR7 220 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 PFN4Q8NHR9 129 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 CEP19Q96LK0 163 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 SERPINI1Q99574 410 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 OSTCQ9NRP0 149 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 C14orf105Q9NVL8 296 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 NHP2Q9NX24 153 aaKnown RBP1□□□□□ -2.25
PPP4R1-227ENST00000583988 TVP23BQ9NYZ1 205 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 IDI2-AS1Q9NZ38 188 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 FAM32AQ9Y421 112 aaKnown RBP1□□□□□ -2.25
PPP4R1-227ENST00000583988 SDK1Q7Z5N4 2213 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 MED13Q9UHV7 2174 aa1□□□□□ -2.25
PPP4R1-227ENST00000583988 NEO1Q92859 1461 aa0.99□□□□□ -2.25
PPP4R1-227ENST00000583988 CCDC144AA2RUR9 1427 aa0.99□□□□□ -2.25
PPP4R1-227ENST00000583988 ZFYVE9O95405 1425 aa0.99□□□□□ -2.25
PPP4R1-227ENST00000583988 FREM1Q5H8C1 2179 aa0.99□□□□□ -2.25
PPP4R1-227ENST00000583988 HCRTO43612 131 aa0.99□□□□□ -2.25
PPP4R1-227ENST00000583988 ZNF682O95780 498 aa0.99□□□□□ -2.25
PPP4R1-227ENST00000583988 SHBGP04278 402 aa0.99□□□□□ -2.25
PPP4R1-227ENST00000583988 CDC42P60953 191 aa0.99□□□□□ -2.25
PPP4R1-227ENST00000583988 ARF6P62330 175 aa0.99□□□□□ -2.25
PPP4R1-227ENST00000583988 RHEBQ15382 184 aa0.99□□□□□ -2.25
PPP4R1-227ENST00000583988 KISS1Q15726 138 aa0.99□□□□□ -2.25
PPP4R1-227ENST00000583988 PHF13Q86YI8 300 aaPredicted RBP0.99□□□□□ -2.25
PPP4R1-227ENST00000583988 OR52L1Q8NGH7 329 aa0.99□□□□□ -2.25
PPP4R1-227ENST00000583988 OR5A1Q8NGJ0 315 aa0.99□□□□□ -2.25
PPP4R1-227ENST00000583988 FAM172AQ8WUF8 416 aa0.99□□□□□ -2.25
PPP4R1-227ENST00000583988 ENY2Q9NPA8 101 aa0.99□□□□□ -2.25
PPP4R1-227ENST00000583988 UQCC1Q9NVA1 299 aa0.99□□□□□ -2.25
PPP4R1-227ENST00000583988 OR5AC2Q9NZP5 309 aa0.99□□□□□ -2.25
PPP4R1-227ENST00000583988 OPTCQ9UBM4 332 aa0.99□□□□□ -2.25
PPP4R1-227ENST00000583988 TP73-AS1Q9UF72 201 aa0.99□□□□□ -2.25
PPP4R1-227ENST00000583988 ARL5AQ9Y689 179 aa0.99□□□□□ -2.25
PPP4R1-227ENST00000583988 COL6A6A6NMZ7 2263 aa0.99□□□□□ -2.25
PPP4R1-227ENST00000583988 CCDC88AQ3V6T2 1871 aa0.99□□□□□ -2.25
PPP4R1-227ENST00000583988 ROBO3Q96MS0 1386 aa0.98□□□□□ -2.25
PPP4R1-227ENST00000583988 A0A087X0T9 212 aa0.98□□□□□ -2.25
PPP4R1-227ENST00000583988 IGKV2D-26A0A0A0MRZ7 120 aa0.98□□□□□ -2.25
PPP4R1-227ENST00000583988 TRAV14DV4A0A0A6YYC5 116 aa0.98□□□□□ -2.25
PPP4R1-227ENST00000583988 C7orf71A4D174 169 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms