RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 KHDC3LQ587J8 217 aa11.64□□□□□ -0.55
MKS1-211ENST00000581761 FAM120AOSQ5T036 256 aa11.64□□□□□ -0.55
MKS1-211ENST00000581761 PVRIGQ6DKI7 326 aa11.64□□□□□ -0.55
MKS1-211ENST00000581761 ETFRF1Q6IPR1 90 aa11.64□□□□□ -0.55
MKS1-211ENST00000581761 ATRAIDQ6UW56 229 aa11.64□□□□□ -0.55
MKS1-211ENST00000581761 PRSS57Q6UWY2 283 aa11.64□□□□□ -0.55
MKS1-211ENST00000581761 SLC35B3Q9H1N7 401 aa11.64□□□□□ -0.55
MKS1-211ENST00000581761 FNDC4Q9H6D8 234 aaPredicted RBP11.64□□□□□ -0.55
MKS1-211ENST00000581761 F11RQ9Y624 299 aaKnown RBP11.64□□□□□ -0.55
MKS1-211ENST00000581761 SRP19P09132 144 aaKnown RBP11.63□□□□□ -0.55
MKS1-211ENST00000581761 BCL2P10415 239 aa11.63□□□□□ -0.55
MKS1-211ENST00000581761 MFAP2P55001 183 aa11.63□□□□□ -0.55
MKS1-211ENST00000581761 RUSC1-AS1Q66K80 236 aa11.63□□□□□ -0.55
MKS1-211ENST00000581761 C19orf35Q6ZS72 473 aa11.63□□□□□ -0.55
MKS1-211ENST00000581761 IQCF2Q8IXL9 164 aa11.63□□□□□ -0.55
MKS1-211ENST00000581761 PIP4P2Q8N4L2 257 aa11.63□□□□□ -0.55
MKS1-211ENST00000581761 OR1P1Q8NH06 330 aa11.63□□□□□ -0.55
MKS1-211ENST00000581761 Q96MF0 132 aa11.63□□□□□ -0.55
MKS1-211ENST00000581761 C1RLQ9NZP8 487 aa11.63□□□□□ -0.55
MKS1-211ENST00000581761 TRAV40A0A0B4J280 105 aa11.62□□□□□ -0.55
MKS1-211ENST00000581761 B4DSR2 109 aa11.62□□□□□ -0.55
MKS1-211ENST00000581761 CORTO00230 105 aa11.62□□□□□ -0.55
MKS1-211ENST00000581761 HSPB1P04792 205 aaKnown RBP11.62□□□□□ -0.55
MKS1-211ENST00000581761 LINC00869P0C866 280 aa11.62□□□□□ -0.55
MKS1-211ENST00000581761 DEFA4P12838 97 aa11.62□□□□□ -0.55
MKS1-211ENST00000581761 PRR20EP86478 221 aa11.62□□□□□ -0.55
MKS1-211ENST00000581761 PRR20CP86479 221 aa11.62□□□□□ -0.55
MKS1-211ENST00000581761 PRR20DP86480 221 aa11.62□□□□□ -0.55
MKS1-211ENST00000581761 PRR20BP86481 221 aa11.62□□□□□ -0.55
MKS1-211ENST00000581761 PRR20AP86496 221 aa11.62□□□□□ -0.55
MKS1-211ENST00000581761 RBMS3Q6XE24 437 aaKnown RBP11.62□□□□□ -0.55
MKS1-211ENST00000581761 CYP2G1PQ6ZSU1 146 aa11.62□□□□□ -0.55
MKS1-211ENST00000581761 CIARTQ8N365 385 aaPredicted RBP11.62□□□□□ -0.55
MKS1-211ENST00000581761 NKX6-2Q9C056 277 aaPredicted RBP11.62□□□□□ -0.55
MKS1-211ENST00000581761 TMPRSS5Q9H3S3 457 aa11.62□□□□□ -0.55
MKS1-211ENST00000581761 IGKV1OR2-108A0A075B7D4 117 aa11.61□□□□□ -0.55
MKS1-211ENST00000581761 TRAV20A0A0B4J274 112 aa11.61□□□□□ -0.55
MKS1-211ENST00000581761 TSPAN9O75954 239 aa11.61□□□□□ -0.55
MKS1-211ENST00000581761 SNAPINO95295 136 aa11.61□□□□□ -0.55
MKS1-211ENST00000581761 FOSL1P15407 271 aa11.61□□□□□ -0.55
MKS1-211ENST00000581761 RND2P52198 227 aa11.61□□□□□ -0.55
MKS1-211ENST00000581761 RHOBP62745 196 aa11.61□□□□□ -0.55
MKS1-211ENST00000581761 PMS2P11Q13670 270 aa11.61□□□□□ -0.55
MKS1-211ENST00000581761 THAP8Q8NA92 274 aa11.61□□□□□ -0.55
MKS1-211ENST00000581761 C22orf15Q8WYQ4 148 aa11.61□□□□□ -0.55
MKS1-211ENST00000581761 NPIPB3Q92617 1050 aa11.61□□□□□ -0.55
MKS1-211ENST00000581761 ARPC1AQ92747 370 aa11.61□□□□□ -0.55
MKS1-211ENST00000581761 GSX1Q9H4S2 264 aaPredicted RBP11.61□□□□□ -0.55
MKS1-211ENST00000581761 C7orf69Q9H7B7 122 aa11.61□□□□□ -0.55
MKS1-211ENST00000581761 ABCA2Q9BZC7 2435 aa11.61□□□□□ -0.55
MKS1-211ENST00000581761 PLXNB1O43157 2135 aa11.6□□□□□ -0.55
MKS1-211ENST00000581761 IGHV3-21A0A0B4J1V1 117 aa11.6□□□□□ -0.55
MKS1-211ENST00000581761 IGHV3-48P01763 117 aa11.6□□□□□ -0.55
MKS1-211ENST00000581761 CRYGCP07315 174 aa11.6□□□□□ -0.55
MKS1-211ENST00000581761 GATA2P23769 480 aaPredicted RBP11.6□□□□□ -0.55
MKS1-211ENST00000581761 CEBPGP53567 150 aa11.6□□□□□ -0.55
MKS1-211ENST00000581761 CX3CL1P78423 397 aa11.6□□□□□ -0.55
MKS1-211ENST00000581761 BTN1A1Q13410 526 aa11.6□□□□□ -0.55
MKS1-211ENST00000581761 SOHLH1Q5JUK2 328 aa11.6□□□□□ -0.55
MKS1-211ENST00000581761 LINC01356Q8N9X3 169 aa11.6□□□□□ -0.55
MKS1-211ENST00000581761 SLC25A33Q9BSK2 321 aa11.6□□□□□ -0.55
MKS1-211ENST00000581761 FAM103A1Q9BTL3 118 aaKnown RBP11.6□□□□□ -0.55
MKS1-211ENST00000581761 WNT10AQ9GZT5 417 aa11.6□□□□□ -0.55
MKS1-211ENST00000581761 MANBALQ9NQG1 85 aa11.6□□□□□ -0.55
MKS1-211ENST00000581761 HIF1ANQ9NWT6 349 aa11.6□□□□□ -0.55
MKS1-211ENST00000581761 MRPL36Q9P0J6 103 aaKnown RBP11.6□□□□□ -0.55
MKS1-211ENST00000581761 VAX2Q9UIW0 290 aa11.6□□□□□ -0.55
MKS1-211ENST00000581761 NSD1Q96L73 2696 aaPredicted RBP11.6□□□□□ -0.55
MKS1-211ENST00000581761 A0A096LNT2 108 aa11.59□□□□□ -0.55
MKS1-211ENST00000581761 TCRBV4S1A1TA0A5B7 111 aa11.59□□□□□ -0.55
MKS1-211ENST00000581761 MT-CO2P00403 227 aa11.59□□□□□ -0.55
MKS1-211ENST00000581761 FBP1P09467 338 aa11.59□□□□□ -0.55
MKS1-211ENST00000581761 IGHV4-38-2P0DP08 117 aa11.59□□□□□ -0.55
MKS1-211ENST00000581761 CTRB1P17538 263 aa11.59□□□□□ -0.55
MKS1-211ENST00000581761 TAGLN2P37802 199 aaKnown RBP11.59□□□□□ -0.55
MKS1-211ENST00000581761 NPBWR1P48145 328 aa11.59□□□□□ -0.55
MKS1-211ENST00000581761 PSMB3P49720 205 aa11.59□□□□□ -0.55
MKS1-211ENST00000581761 SPATA31B1PQ5VZV4 182 aa11.59□□□□□ -0.55
MKS1-211ENST00000581761 CTRB2Q6GPI1 263 aa11.59□□□□□ -0.55
MKS1-211ENST00000581761 ZNF562Q6V9R5 426 aa11.59□□□□□ -0.55
MKS1-211ENST00000581761 BRD3OSQ6XYD6 125 aa11.59□□□□□ -0.55
MKS1-211ENST00000581761 SLC35E3Q7Z769 313 aa11.59□□□□□ -0.55
MKS1-211ENST00000581761 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.59□□□□□ -0.55
MKS1-211ENST00000581761 Q8N9W7 124 aa11.59□□□□□ -0.55
MKS1-211ENST00000581761 OR1L6Q8NGR2 347 aa11.59□□□□□ -0.55
MKS1-211ENST00000581761 SMR3AQ99954 134 aa11.59□□□□□ -0.55
MKS1-211ENST00000581761 RASL11BQ9BPW5 248 aa11.59□□□□□ -0.55
MKS1-211ENST00000581761 DMRT1Q9Y5R6 373 aa11.59□□□□□ -0.55
MKS1-211ENST00000581761 NAV3Q8IVL0 2385 aa11.59□□□□□ -0.55
MKS1-211ENST00000581761 IGKV1D-37A0A075B6S9 117 aa11.58□□□□□ -0.56
MKS1-211ENST00000581761 A0A0U1RQK1 487 aa11.58□□□□□ -0.56
MKS1-211ENST00000581761 CXorf1O96002 111 aa11.58□□□□□ -0.56
MKS1-211ENST00000581761 STAG3L2P0CL84 134 aa11.58□□□□□ -0.56
MKS1-211ENST00000581761 STAG3L3P0CL85 134 aa11.58□□□□□ -0.56
MKS1-211ENST00000581761 GATA3P23771 443 aa11.58□□□□□ -0.56
MKS1-211ENST00000581761 NDPQ00604 133 aa11.58□□□□□ -0.56
MKS1-211ENST00000581761 TMEM249Q2WGJ8 235 aa11.58□□□□□ -0.56
MKS1-211ENST00000581761 CYB561D1Q8N8Q1 229 aa11.58□□□□□ -0.56
MKS1-211ENST00000581761 CLRN3Q8NCR9 226 aa11.58□□□□□ -0.56
MKS1-211ENST00000581761 GATAD1Q8WUU5 269 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms