RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 RBMS3Q6XE24 437 aaKnown RBP14.12□□□□□ -0.15
EIF4A1-216ENST00000580888 C3orf56Q8N813 242 aa14.12□□□□□ -0.15
EIF4A1-216ENST00000580888 C17orf50Q8WW18 174 aa14.12□□□□□ -0.15
EIF4A1-216ENST00000580888 ZNF48Q96MX3 618 aaPredicted RBP14.12□□□□□ -0.15
EIF4A1-216ENST00000580888 TMEM231Q9H6L2 316 aa14.12□□□□□ -0.15
EIF4A1-216ENST00000580888 KCNIP2Q9NS61 270 aa14.12□□□□□ -0.15
EIF4A1-216ENST00000580888 CENPVL3A0A0U1RRI6 287 aa14.11□□□□□ -0.15
EIF4A1-216ENST00000580888 RBFOX3A6NFN3 312 aa14.11□□□□□ -0.15
EIF4A1-216ENST00000580888 CLDN34H7C241 214 aa14.11□□□□□ -0.15
EIF4A1-216ENST00000580888 FCN1O00602 326 aa14.11□□□□□ -0.15
EIF4A1-216ENST00000580888 NDUFS6O75380 124 aaKnown RBP14.11□□□□□ -0.15
EIF4A1-216ENST00000580888 CRYGCP07315 174 aa14.11□□□□□ -0.15
EIF4A1-216ENST00000580888 SNRNP70P08621 437 aaKnown RBP14.11□□□□□ -0.15
EIF4A1-216ENST00000580888 OR13C7P0DN81 318 aa14.11□□□□□ -0.15
EIF4A1-216ENST00000580888 ELLP55199 621 aaPredicted RBP14.11□□□□□ -0.15
EIF4A1-216ENST00000580888 PRR20EP86478 221 aa14.11□□□□□ -0.15
EIF4A1-216ENST00000580888 PRR20CP86479 221 aa14.11□□□□□ -0.15
EIF4A1-216ENST00000580888 PRR20DP86480 221 aa14.11□□□□□ -0.15
EIF4A1-216ENST00000580888 PRR20BP86481 221 aa14.11□□□□□ -0.15
EIF4A1-216ENST00000580888 PRR20AP86496 221 aa14.11□□□□□ -0.15
EIF4A1-216ENST00000580888 GAMTQ14353 236 aa14.11□□□□□ -0.15
EIF4A1-216ENST00000580888 TNXAQ16473 311 aa14.11□□□□□ -0.15
EIF4A1-216ENST00000580888 ACOT6Q3I5F7 207 aaPredicted RBP14.11□□□□□ -0.15
EIF4A1-216ENST00000580888 FBLN7Q53RD9 439 aa14.11□□□□□ -0.15
EIF4A1-216ENST00000580888 BCL6BQ8N143 479 aaPredicted RBP14.11□□□□□ -0.15
EIF4A1-216ENST00000580888 OR10G4Q8NGN3 311 aa14.11□□□□□ -0.15
EIF4A1-216ENST00000580888 OR10G9Q8NGN4 311 aa14.11□□□□□ -0.15
EIF4A1-216ENST00000580888 OR10G7Q8NGN6 311 aa14.11□□□□□ -0.15
EIF4A1-216ENST00000580888 ACTR3CQ9C0K3 210 aaPredicted RBP14.11□□□□□ -0.15
EIF4A1-216ENST00000580888 SLC45A2Q9UMX9 530 aa14.11□□□□□ -0.15
EIF4A1-216ENST00000580888 A0A1W2PRD5 423 aa14.1□□□□□ -0.15
EIF4A1-216ENST00000580888 A0A1W2PRF3 423 aa14.1□□□□□ -0.15
EIF4A1-216ENST00000580888 A0A1W2PRM7 423 aa14.1□□□□□ -0.15
EIF4A1-216ENST00000580888 SMCO3A2RU48 225 aa14.1□□□□□ -0.15
EIF4A1-216ENST00000580888 DNAJC9-AS1A6NH13 148 aa14.1□□□□□ -0.15
EIF4A1-216ENST00000580888 NPFFO15130 113 aa14.1□□□□□ -0.15
EIF4A1-216ENST00000580888 IGHV4-38-2P0DP08 117 aa14.1□□□□□ -0.15
EIF4A1-216ENST00000580888 FOXL1Q12952 345 aa14.1□□□□□ -0.15
EIF4A1-216ENST00000580888 C5orf64Q2M2E5 130 aa14.1□□□□□ -0.15
EIF4A1-216ENST00000580888 SGMS2Q8NHU3 365 aa14.1□□□□□ -0.15
EIF4A1-216ENST00000580888 MAP1LC3B2A6NCE7 125 aa14.09□□□□□ -0.15
EIF4A1-216ENST00000580888 CYB5BO43169 146 aa14.09□□□□□ -0.15
EIF4A1-216ENST00000580888 ACTL6BO94805 426 aa14.09□□□□□ -0.15
EIF4A1-216ENST00000580888 RNASE1P07998 156 aaKnown RBP14.09□□□□□ -0.15
EIF4A1-216ENST00000580888 SFTA3P0C7M3 94 aa14.09□□□□□ -0.15
EIF4A1-216ENST00000580888 LINC00869P0C866 280 aa14.09□□□□□ -0.15
EIF4A1-216ENST00000580888 RAB31Q13636 194 aa14.09□□□□□ -0.15
EIF4A1-216ENST00000580888 ICAM4Q14773 271 aa14.09□□□□□ -0.15
EIF4A1-216ENST00000580888 MMDQ15546 238 aa14.09□□□□□ -0.15
EIF4A1-216ENST00000580888 KHDC3LQ587J8 217 aa14.09□□□□□ -0.15
EIF4A1-216ENST00000580888 SLC16A13Q7RTY0 426 aa14.09□□□□□ -0.15
EIF4A1-216ENST00000580888 OR1P1Q8NH06 330 aa14.09□□□□□ -0.15
EIF4A1-216ENST00000580888 SRSF12Q8WXF0 261 aaKnown RBP14.09□□□□□ -0.15
EIF4A1-216ENST00000580888 NARS2Q96I59 477 aaKnown RBP14.09□□□□□ -0.15
EIF4A1-216ENST00000580888 MAP1LC3BQ9GZQ8 125 aa14.09□□□□□ -0.15
EIF4A1-216ENST00000580888 PRDM13Q9H4Q3 707 aa14.09□□□□□ -0.15
EIF4A1-216ENST00000580888 FNDC4Q9H6D8 234 aaPredicted RBP14.09□□□□□ -0.15
EIF4A1-216ENST00000580888 SLC39A9Q9NUM3 307 aa14.09□□□□□ -0.15
EIF4A1-216ENST00000580888 PXMP4Q9Y6I8 212 aa14.09□□□□□ -0.15
EIF4A1-216ENST00000580888 IGKV1OR2-108A0A075B7D4 117 aa14.08□□□□□ -0.16
EIF4A1-216ENST00000580888 LOC102723971A0A1B0GUV8 181 aa14.08□□□□□ -0.16
EIF4A1-216ENST00000580888 F8W036 122 aa14.08□□□□□ -0.16
EIF4A1-216ENST00000580888 APOC3P02656 99 aa14.08□□□□□ -0.16
EIF4A1-216ENST00000580888 SAA4P35542 130 aa14.08□□□□□ -0.16
EIF4A1-216ENST00000580888 MFAP2P55001 183 aa14.08□□□□□ -0.16
EIF4A1-216ENST00000580888 MLANAQ16655 118 aa14.08□□□□□ -0.16
EIF4A1-216ENST00000580888 MIC13Q5XKP0 118 aa14.08□□□□□ -0.16
EIF4A1-216ENST00000580888 LCN15Q6UWW0 184 aa14.08□□□□□ -0.16
EIF4A1-216ENST00000580888 PIP4P2Q8N4L2 257 aa14.08□□□□□ -0.16
EIF4A1-216ENST00000580888 THAP8Q8NA92 274 aa14.08□□□□□ -0.16
EIF4A1-216ENST00000580888 RARRES2Q99969 163 aa14.08□□□□□ -0.16
EIF4A1-216ENST00000580888 ZNF747Q9BV97 191 aa14.08□□□□□ -0.16
EIF4A1-216ENST00000580888 SLC35B3Q9H1N7 401 aa14.08□□□□□ -0.16
EIF4A1-216ENST00000580888 F11RQ9Y624 299 aaKnown RBP14.08□□□□□ -0.16
EIF4A1-216ENST00000580888 CMYA5Q8N3K9 4069 aa14.08□□□□□ -0.16
EIF4A1-216ENST00000580888 TSPAN9O75954 239 aa14.07□□□□□ -0.16
EIF4A1-216ENST00000580888 HSPB1P04792 205 aaKnown RBP14.07□□□□□ -0.16
EIF4A1-216ENST00000580888 AREGP15514 252 aa14.07□□□□□ -0.16
EIF4A1-216ENST00000580888 PAX6P26367 422 aa14.07□□□□□ -0.16
EIF4A1-216ENST00000580888 BPIFB3P59826 476 aa14.07□□□□□ -0.16
EIF4A1-216ENST00000580888 RAB24Q969Q5 203 aa14.07□□□□□ -0.16
EIF4A1-216ENST00000580888 EIF5A2Q9GZV4 153 aaKnown RBP14.07□□□□□ -0.16
EIF4A1-216ENST00000580888 MEGF8Q7Z7M0 2845 aa14.07□□□□□ -0.16
EIF4A1-216ENST00000580888 TRAV40A0A0B4J280 105 aa14.06□□□□□ -0.16
EIF4A1-216ENST00000580888 IGHV1-69DA0A0B4J2H0 117 aa14.06□□□□□ -0.16
EIF4A1-216ENST00000580888 A0A1B0GV50 99 aa14.06□□□□□ -0.16
EIF4A1-216ENST00000580888 CORTO00230 105 aa14.06□□□□□ -0.16
EIF4A1-216ENST00000580888 IGHV1-69P01742 117 aa14.06□□□□□ -0.16
EIF4A1-216ENST00000580888 SRP19P09132 144 aaKnown RBP14.06□□□□□ -0.16
EIF4A1-216ENST00000580888 BRS3P32247 399 aa14.06□□□□□ -0.16
EIF4A1-216ENST00000580888 HNF4GQ14541 408 aa14.06□□□□□ -0.16
EIF4A1-216ENST00000580888 ATRAIDQ6UW56 229 aa14.06□□□□□ -0.16
EIF4A1-216ENST00000580888 ZNF562Q6V9R5 426 aa14.06□□□□□ -0.16
EIF4A1-216ENST00000580888 SVBPQ8N300 66 aa14.06□□□□□ -0.16
EIF4A1-216ENST00000580888 STPG3Q8N7X2 389 aa14.06□□□□□ -0.16
EIF4A1-216ENST00000580888 SLC35E1Q96K37 410 aa14.06□□□□□ -0.16
EIF4A1-216ENST00000580888 MEGF9Q9H1U4 602 aa14.06□□□□□ -0.16
EIF4A1-216ENST00000580888 SCO1O75880 301 aa14.05□□□□□ -0.16
EIF4A1-216ENST00000580888 FAM106CPP0CH98 169 aa14.05□□□□□ -0.16
EIF4A1-216ENST00000580888 CTRB1P17538 263 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms