RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 C19orf35Q6ZS72 473 aa23.07■■□□□ 1.28
CTDNEP1-208ENST00000573600 TMEM116Q8NCL8 245 aa23.07■■□□□ 1.28
CTDNEP1-208ENST00000573600 FAM103A1Q9BTL3 118 aaKnown RBP23.07■■□□□ 1.28
CTDNEP1-208ENST00000573600 USP9YO00507 2555 aaPredicted RBP23.06■■□□□ 1.28
CTDNEP1-208ENST00000573600 A0A0U1RQK1 487 aa23.06■■□□□ 1.28
CTDNEP1-208ENST00000573600 TCRBV4S1A1TA0A5B7 111 aa23.06■■□□□ 1.28
CTDNEP1-208ENST00000573600 MT-CO2P00403 227 aa23.06■■□□□ 1.28
CTDNEP1-208ENST00000573600 SRP19P09132 144 aaKnown RBP23.06■■□□□ 1.28
CTDNEP1-208ENST00000573600 SELENOTP62341 195 aa23.06■■□□□ 1.28
CTDNEP1-208ENST00000573600 SLC35E3Q7Z769 313 aa23.06■■□□□ 1.28
CTDNEP1-208ENST00000573600 MANBALQ9NQG1 85 aa23.06■■□□□ 1.28
CTDNEP1-208ENST00000573600 VAX2Q9UIW0 290 aa23.06■■□□□ 1.28
CTDNEP1-208ENST00000573600 DMRT1Q9Y5R6 373 aa23.06■■□□□ 1.28
CTDNEP1-208ENST00000573600 ANKRD17O75179 2603 aaKnown RBP23.06■■□□□ 1.28
CTDNEP1-208ENST00000573600 SNAPINO95295 136 aa23.05■■□□□ 1.28
CTDNEP1-208ENST00000573600 STAG3L2P0CL84 134 aa23.05■■□□□ 1.28
CTDNEP1-208ENST00000573600 STAG3L3P0CL85 134 aa23.05■■□□□ 1.28
CTDNEP1-208ENST00000573600 PSMB3P49720 205 aa23.05■■□□□ 1.28
CTDNEP1-208ENST00000573600 GUCA2BQ16661 112 aa23.05■■□□□ 1.28
CTDNEP1-208ENST00000573600 IGHV7-81A0A0B4J1V7 117 aa23.05■■□□□ 1.28
CTDNEP1-208ENST00000573600 RNF223E7ERA6 249 aa23.05■■□□□ 1.28
CTDNEP1-208ENST00000573600 TTC9CQ8N5M4 171 aa23.05■■□□□ 1.28
CTDNEP1-208ENST00000573600 MRPL36Q9P0J6 103 aaKnown RBP23.05■■□□□ 1.28
CTDNEP1-208ENST00000573600 TMPRSS5Q9H3S3 457 aa23.04■■□□□ 1.28
CTDNEP1-208ENST00000573600 CRYBG3Q68DQ2 2970 aa23.04■■□□□ 1.28
CTDNEP1-208ENST00000573600 IGKV1D-37A0A075B6S9 117 aa23.03■■□□□ 1.28
CTDNEP1-208ENST00000573600 IGHV3-48P01763 117 aa23.03■■□□□ 1.28
CTDNEP1-208ENST00000573600 NDPQ00604 133 aa23.03■■□□□ 1.28
CTDNEP1-208ENST00000573600 TRGV9Q99603 122 aa23.03■■□□□ 1.28
CTDNEP1-208ENST00000573600 NKX6-2Q9C056 277 aaPredicted RBP23.03■■□□□ 1.28
CTDNEP1-208ENST00000573600 I3L2K1 104 aa23.02■■□□□ 1.28
CTDNEP1-208ENST00000573600 CXorf1O96002 111 aa23.02■■□□□ 1.28
CTDNEP1-208ENST00000573600 FBP1P09467 338 aa23.02■■□□□ 1.28
CTDNEP1-208ENST00000573600 SOHLH1Q5JUK2 328 aa23.02■■□□□ 1.28
CTDNEP1-208ENST00000573600 ASPHD1Q5U4P2 390 aa23.02■■□□□ 1.28
CTDNEP1-208ENST00000573600 NANPQ8TBE9 248 aa23.02■■□□□ 1.28
CTDNEP1-208ENST00000573600 RBM14Q96PK6 669 aaKnown RBP23.02■■□□□ 1.28
CTDNEP1-208ENST00000573600 FBN2P35556 2912 aa23.02■■□□□ 1.28
CTDNEP1-208ENST00000573600 GATA2P23769 480 aaPredicted RBP23.02■■□□□ 1.28
CTDNEP1-208ENST00000573600 KLF17Q5JT82 389 aaPredicted RBP23.02■■□□□ 1.28
CTDNEP1-208ENST00000573600 ATRAIDQ6UW56 229 aa23.02■■□□□ 1.28
CTDNEP1-208ENST00000573600 IQCF2Q8IXL9 164 aa23.02■■□□□ 1.28
CTDNEP1-208ENST00000573600 RNF2Q99496 336 aa23.02■■□□□ 1.28
CTDNEP1-208ENST00000573600 SEPSECSQ9HD40 501 aaKnown RBP23.02■■□□□ 1.28
CTDNEP1-208ENST00000573600 NDUFS6O75380 124 aaKnown RBP23.01■■□□□ 1.27
CTDNEP1-208ENST00000573600 TGFAP01135 160 aa23.01■■□□□ 1.27
CTDNEP1-208ENST00000573600 AVPP01185 164 aa23.01■■□□□ 1.27
CTDNEP1-208ENST00000573600 BPIFB3P59826 476 aa23.01■■□□□ 1.27
CTDNEP1-208ENST00000573600 TNFRSF19Q9NS68 423 aa23.01■■□□□ 1.27
CTDNEP1-208ENST00000573600 FUT9Q9Y231 359 aa23.01■■□□□ 1.27
CTDNEP1-208ENST00000573600 MOB4Q9Y3A3 225 aa23.01■■□□□ 1.27
CTDNEP1-208ENST00000573600 FAM78BQ5VT40 261 aa23■■□□□ 1.27
CTDNEP1-208ENST00000573600 PIFOQ8TCI5 191 aa23■■□□□ 1.27
CTDNEP1-208ENST00000573600 GATAD1Q8WUU5 269 aa23■■□□□ 1.27
CTDNEP1-208ENST00000573600 SSX3Q99909 188 aa23■■□□□ 1.27
CTDNEP1-208ENST00000573600 OR5G3P0C626 314 aa22.99■■□□□ 1.27
CTDNEP1-208ENST00000573600 C5orf56Q8N8D9 126 aa22.99■■□□□ 1.27
CTDNEP1-208ENST00000573600 OR4X1Q8NH49 305 aa22.99■■□□□ 1.27
CTDNEP1-208ENST00000573600 PFDN5Q99471 154 aa22.99■■□□□ 1.27
CTDNEP1-208ENST00000573600 ASH1LQ9NR48 2969 aaKnown RBP22.99■■□□□ 1.27
CTDNEP1-208ENST00000573600 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.99■■□□□ 1.275e-8■□□□□ 9.7
CTDNEP1-208ENST00000573600 EGR2P11161 476 aaPredicted RBP22.99■■□□□ 1.27
CTDNEP1-208ENST00000573600 SPNS3Q6ZMD2 512 aa22.99■■□□□ 1.27
CTDNEP1-208ENST00000573600 OR1L4Q8NGR5 311 aa22.99■■□□□ 1.27
CTDNEP1-208ENST00000573600 SGMS2Q8NHU3 365 aa22.99■■□□□ 1.27
CTDNEP1-208ENST00000573600 MRPL32Q9BYC8 188 aaKnown RBP22.99■■□□□ 1.27
CTDNEP1-208ENST00000573600 IGHV3-21A0A0B4J1V1 117 aa22.98■■□□□ 1.27
CTDNEP1-208ENST00000573600 ARL14EPLP0DKL9 152 aa22.98■■□□□ 1.27
CTDNEP1-208ENST00000573600 IGHV4-31P0DP07 118 aa22.98■■□□□ 1.27
CTDNEP1-208ENST00000573600 MEF2BQ02080 365 aaPredicted RBP22.98■■□□□ 1.27
CTDNEP1-208ENST00000573600 ZNF90Q03938 601 aa22.98■■□□□ 1.27
CTDNEP1-208ENST00000573600 CYB561D1Q8N8Q1 229 aa22.98■■□□□ 1.27
CTDNEP1-208ENST00000573600 Q96MF0 132 aa22.98■■□□□ 1.27
CTDNEP1-208ENST00000573600 HSPB9Q9BQS6 159 aa22.98■■□□□ 1.27
CTDNEP1-208ENST00000573600 IGLV11-55A0A075B6I3 123 aa22.97■■□□□ 1.27
CTDNEP1-208ENST00000573600 K7EIM0 57 aa22.97■■□□□ 1.27
CTDNEP1-208ENST00000573600 SPATA31B1PQ5VZV4 182 aa22.97■■□□□ 1.27
CTDNEP1-208ENST00000573600 MAPK1IP1LQ8NDC0 245 aa22.97■■□□□ 1.27
CTDNEP1-208ENST00000573600 TMEM68Q96MH6 324 aa22.97■■□□□ 1.27
CTDNEP1-208ENST00000573600 DNAJC4Q9NNZ3 241 aa22.97■■□□□ 1.27
CTDNEP1-208ENST00000573600 THYN1Q9P016 225 aa22.97■■□□□ 1.27
CTDNEP1-208ENST00000573600 PSMB11A5LHX3 300 aa22.96■■□□□ 1.27
CTDNEP1-208ENST00000573600 CLRN3Q8NCR9 226 aa22.96■■□□□ 1.27
CTDNEP1-208ENST00000573600 TECRQ9NZ01 308 aaKnown RBP22.96■■□□□ 1.27
CTDNEP1-208ENST00000573600 DOPEY2Q9Y3R5 2298 aa22.96■■□□□ 1.27
CTDNEP1-208ENST00000573600 PTPN13Q12923 2485 aa22.96■■□□□ 1.27
CTDNEP1-208ENST00000573600 TAS2R45P59539 299 aa22.96■■□□□ 1.27
CTDNEP1-208ENST00000573600 MIR17HGQ75NE6 70 aa22.95■■□□□ 1.26
CTDNEP1-208ENST00000573600 KRTAP1-3Q8IUG1 177 aa22.95■■□□□ 1.26
CTDNEP1-208ENST00000573600 TMEM37Q8WXS4 190 aa22.95■■□□□ 1.26
CTDNEP1-208ENST00000573600 FANCD2OSQ96PS1 177 aa22.95■■□□□ 1.26
CTDNEP1-208ENST00000573600 CR1P17927 2039 aa22.95■■□□□ 1.26
CTDNEP1-208ENST00000573600 COX7A2P2O60397 106 aa22.94■■□□□ 1.26
CTDNEP1-208ENST00000573600 PAGE4O60829 102 aa22.94■■□□□ 1.26
CTDNEP1-208ENST00000573600 CEBPGP53567 150 aa22.94■■□□□ 1.26
CTDNEP1-208ENST00000573600 BTN1A1Q13410 526 aa22.94■■□□□ 1.26
CTDNEP1-208ENST00000573600 TMEM219Q86XT9 240 aa22.94■■□□□ 1.26
CTDNEP1-208ENST00000573600 CLN5O75503 358 aa22.94■■□□□ 1.26
CTDNEP1-208ENST00000573600 GCHFRP30047 84 aa22.94■■□□□ 1.26
CTDNEP1-208ENST00000573600 NPBWR1P48145 328 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms