RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 LINC00527Q9UJ94 153 aa10.73□□□□□ -0.69
CCDC40-209ENST00000573474 HIVEP2P31629 2446 aa10.73□□□□□ -0.69
CCDC40-209ENST00000573474 IGHV3-21A0A0B4J1V1 117 aa10.72□□□□□ -0.69
CCDC40-209ENST00000573474 INAFM1C9JVW0 142 aa10.72□□□□□ -0.69
CCDC40-209ENST00000573474 K7EIM0 57 aa10.72□□□□□ -0.69
CCDC40-209ENST00000573474 BRI3O95415 125 aa10.72□□□□□ -0.69
CCDC40-209ENST00000573474 CAMLGP49069 296 aa10.72□□□□□ -0.69
CCDC40-209ENST00000573474 RAB5CP51148 216 aa10.72□□□□□ -0.69
CCDC40-209ENST00000573474 RAB14P61106 215 aa10.72□□□□□ -0.69
CCDC40-209ENST00000573474 SERF2P84101 59 aa10.72□□□□□ -0.69
CCDC40-209ENST00000573474 FAM74A1Q5RGS3 127 aa10.72□□□□□ -0.69
CCDC40-209ENST00000573474 THAP8Q8NA92 274 aa10.72□□□□□ -0.69
CCDC40-209ENST00000573474 TMEM116Q8NCL8 245 aa10.72□□□□□ -0.69
CCDC40-209ENST00000573474 LRRC20Q8TCA0 184 aa10.72□□□□□ -0.69
CCDC40-209ENST00000573474 RNF141Q8WVD5 230 aa10.72□□□□□ -0.69
CCDC40-209ENST00000573474 NPIPB3Q92617 1050 aa10.72□□□□□ -0.69
CCDC40-209ENST00000573474 NOL4LQ96MY1 436 aaPredicted RBP10.72□□□□□ -0.69
CCDC40-209ENST00000573474 MGST2Q99735 147 aa10.72□□□□□ -0.69
CCDC40-209ENST00000573474 ZNF702PQ9H963 129 aa10.72□□□□□ -0.69
CCDC40-209ENST00000573474 ESM1Q9NQ30 184 aa10.72□□□□□ -0.69
CCDC40-209ENST00000573474 ZNF355PQ9NSJ1 428 aa10.72□□□□□ -0.69
CCDC40-209ENST00000573474 PLA2G2EQ9NZK7 142 aa10.72□□□□□ -0.69
CCDC40-209ENST00000573474 FBXL7Q9UJT9 491 aa10.72□□□□□ -0.69
CCDC40-209ENST00000573474 RFNGQ9Y644 331 aa10.72□□□□□ -0.69
CCDC40-209ENST00000573474 TRBV9A0A0B4J1U6 114 aa10.71□□□□□ -0.69
CCDC40-209ENST00000573474 UMAD1C9J7I0 102 aa10.71□□□□□ -0.69
CCDC40-209ENST00000573474 H3BUA1 57 aa10.71□□□□□ -0.69
CCDC40-209ENST00000573474 AGPAT2O15120 278 aa10.71□□□□□ -0.69
CCDC40-209ENST00000573474 SOX15O60248 233 aa10.71□□□□□ -0.69
CCDC40-209ENST00000573474 OR2J3O76001 311 aa10.71□□□□□ -0.69
CCDC40-209ENST00000573474 NDUFB8O95169 186 aa10.71□□□□□ -0.69
CCDC40-209ENST00000573474 IGHV3-48P01763 117 aa10.71□□□□□ -0.69
CCDC40-209ENST00000573474 FAM157CP0CG43 387 aa10.71□□□□□ -0.69
CCDC40-209ENST00000573474 PPIFP30405 207 aaKnown RBP10.71□□□□□ -0.69
CCDC40-209ENST00000573474 SULT1A2P50226 295 aa10.71□□□□□ -0.69
CCDC40-209ENST00000573474 RND2P52198 227 aa10.71□□□□□ -0.69
CCDC40-209ENST00000573474 ACSM6Q6P461 480 aa10.71□□□□□ -0.69
CCDC40-209ENST00000573474 TMEM182Q6ZP80 229 aaPredicted RBP10.71□□□□□ -0.69
CCDC40-209ENST00000573474 Q8N2B8 174 aa10.71□□□□□ -0.69
CCDC40-209ENST00000573474 NECAP1Q8NC96 275 aa10.71□□□□□ -0.69
CCDC40-209ENST00000573474 OR4X1Q8NH49 305 aa10.71□□□□□ -0.69
CCDC40-209ENST00000573474 VN1R17PQ8TDU5 208 aa10.71□□□□□ -0.69
CCDC40-209ENST00000573474 KCNIP2Q9NS61 270 aa10.71□□□□□ -0.69
CCDC40-209ENST00000573474 MRPL36Q9P0J6 103 aaKnown RBP10.71□□□□□ -0.69
CCDC40-209ENST00000573474 HIVEP1P15822 2718 aa10.71□□□□□ -0.7
CCDC40-209ENST00000573474 IGKV1OR2-108A0A075B7D4 117 aa10.7□□□□□ -0.7
CCDC40-209ENST00000573474 RNASE1P07998 156 aaKnown RBP10.7□□□□□ -0.7
CCDC40-209ENST00000573474 OR10J1P30954 320 aa10.7□□□□□ -0.7
CCDC40-209ENST00000573474 MFAP4P55083 255 aa10.7□□□□□ -0.7
CCDC40-209ENST00000573474 HILS1P60008 231 aa10.7□□□□□ -0.7
CCDC40-209ENST00000573474 RHOGP84095 191 aa10.7□□□□□ -0.7
CCDC40-209ENST00000573474 CLLU1Q5K131 121 aa10.7□□□□□ -0.7
CCDC40-209ENST00000573474 AKR1C8PQ5T2L2 129 aa10.7□□□□□ -0.7
CCDC40-209ENST00000573474 JMJD8Q96S16 334 aa10.7□□□□□ -0.7
CCDC40-209ENST00000573474 GGTLC1Q9BX51 225 aa10.7□□□□□ -0.7
CCDC40-209ENST00000573474 SLC45A2Q9UMX9 530 aa10.7□□□□□ -0.7
CCDC40-209ENST00000573474 FAM181BA6NEQ2 426 aa10.69□□□□□ -0.7
CCDC40-209ENST00000573474 ZFP92A6NM28 416 aa10.69□□□□□ -0.7
CCDC40-209ENST00000573474 CYSRT1A8MQ03 144 aa10.69□□□□□ -0.7
CCDC40-209ENST00000573474 CLN5O75503 358 aa10.69□□□□□ -0.7
CCDC40-209ENST00000573474 IGLV1-40P01703 118 aa10.69□□□□□ -0.7
CCDC40-209ENST00000573474 MBP02144 154 aa10.69□□□□□ -0.7
CCDC40-209ENST00000573474 RPL29P47914 159 aaKnown RBP10.69□□□□□ -0.7
CCDC40-209ENST00000573474 NPBWR1P48145 328 aa10.69□□□□□ -0.7
CCDC40-209ENST00000573474 RPL15P61313 204 aaKnown RBP10.69□□□□□ -0.7
CCDC40-209ENST00000573474 CFHR3Q02985 330 aa10.69□□□□□ -0.7
CCDC40-209ENST00000573474 FFAR4Q5NUL3 377 aa10.69□□□□□ -0.7
CCDC40-209ENST00000573474 SAT2Q96F10 170 aaPredicted RBP10.69□□□□□ -0.7
CCDC40-209ENST00000573474 CXorf58Q96LI9 332 aa10.69□□□□□ -0.7
CCDC40-209ENST00000573474 MS4A10Q96PG2 267 aa10.69□□□□□ -0.7
CCDC40-209ENST00000573474 TRGV9Q99603 122 aa10.69□□□□□ -0.7
CCDC40-209ENST00000573474 TXN2Q99757 166 aa10.69□□□□□ -0.7
CCDC40-209ENST00000573474 ZFHX3Q15911 3703 aa10.69□□□□□ -0.7
CCDC40-209ENST00000573474 SETXQ7Z333 2677 aaKnown RBP10.68□□□□□ -0.7
CCDC40-209ENST00000573474 IGKV1D-37A0A075B6S9 117 aa10.68□□□□□ -0.7
CCDC40-209ENST00000573474 TRAV30A0A087WSZ9 112 aa10.68□□□□□ -0.7
CCDC40-209ENST00000573474 TCRBV4S1A1TA0A5B7 111 aa10.68□□□□□ -0.7
CCDC40-209ENST00000573474 TMEM89A2RUT3 159 aa10.68□□□□□ -0.7
CCDC40-209ENST00000573474 FAM223BA6NKX1 122 aa10.68□□□□□ -0.7
CCDC40-209ENST00000573474 ZNF705EA8MWA4 302 aaPredicted RBP10.68□□□□□ -0.7
CCDC40-209ENST00000573474 TSPAN15O95858 294 aa10.68□□□□□ -0.7
CCDC40-209ENST00000573474 TRGV3P03979 118 aa10.68□□□□□ -0.7
CCDC40-209ENST00000573474 CRYBA1P05813 215 aa10.68□□□□□ -0.7
CCDC40-209ENST00000573474 NMBP08949 121 aa10.68□□□□□ -0.7
CCDC40-209ENST00000573474 FCGR2BP31994 310 aaPredicted RBP10.68□□□□□ -0.7
CCDC40-209ENST00000573474 SELENOTP62341 195 aa10.68□□□□□ -0.7
CCDC40-209ENST00000573474 BLOC1S1P78537 153 aa10.68□□□□□ -0.7
CCDC40-209ENST00000573474 ATP5G2Q06055 141 aa10.68□□□□□ -0.7
CCDC40-209ENST00000573474 C15orf32Q32M92 178 aa10.68□□□□□ -0.7
CCDC40-209ENST00000573474 TMEM95Q3KNT9 176 aa10.68□□□□□ -0.7
CCDC40-209ENST00000573474 TMEM41BQ5BJD5 291 aa10.68□□□□□ -0.7
CCDC40-209ENST00000573474 MIC13Q5XKP0 118 aa10.68□□□□□ -0.7
CCDC40-209ENST00000573474 DPPA3Q6W0C5 159 aa10.68□□□□□ -0.7
CCDC40-209ENST00000573474 CYP2G1PQ6ZSU1 146 aa10.68□□□□□ -0.7
CCDC40-209ENST00000573474 FAM223AQ8IWN6 122 aa10.68□□□□□ -0.7
CCDC40-209ENST00000573474 C21orf62Q9NYP8 219 aa10.68□□□□□ -0.7
CCDC40-209ENST00000573474 PXMP4Q9Y6I8 212 aa10.68□□□□□ -0.7
CCDC40-209ENST00000573474 MFSD2BA6NFX1 497 aa10.67□□□□□ -0.7
CCDC40-209ENST00000573474 CRLF1O75462 422 aa10.67□□□□□ -0.7
CCDC40-209ENST00000573474 IGHG4P01861 327 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms