RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 SMIM10L2AP0DMW4 78 aa1.32□□□□□ -2.2
LINC00557-201ENST00000563184 SMIM10L2BP0DMW5 78 aa1.32□□□□□ -2.2
LINC00557-201ENST00000563184 MYL6P60660 151 aa1.32□□□□□ -2.2
LINC00557-201ENST00000563184 CDC42P60953 191 aa1.32□□□□□ -2.2
LINC00557-201ENST00000563184 LSM6P62312 80 aaKnown RBP1.32□□□□□ -2.2
LINC00557-201ENST00000563184 RANP62826 216 aaKnown RBP1.32□□□□□ -2.2
LINC00557-201ENST00000563184 ODF3Q96PU9 254 aa1.32□□□□□ -2.2
LINC00557-201ENST00000563184 SLC39A9Q9NUM3 307 aa1.32□□□□□ -2.2
LINC00557-201ENST00000563184 FUOMA2VDF0 154 aa1.31□□□□□ -2.2
LINC00557-201ENST00000563184 OR2T1O43869 369 aa1.31□□□□□ -2.2
LINC00557-201ENST00000563184 CRYZL1O95825 349 aa1.31□□□□□ -2.2
LINC00557-201ENST00000563184 OMPP47874 163 aa1.31□□□□□ -2.2
LINC00557-201ENST00000563184 AESQ08117 197 aa1.31□□□□□ -2.2
LINC00557-201ENST00000563184 TEX36Q5VZQ5 186 aa1.31□□□□□ -2.2
LINC00557-201ENST00000563184 LINC00471Q8N535 108 aa1.31□□□□□ -2.2
LINC00557-201ENST00000563184 SIGLECL1Q8N7X8 197 aa1.31□□□□□ -2.2
LINC00557-201ENST00000563184 ERGIC3Q9Y282 383 aa1.31□□□□□ -2.2
LINC00557-201ENST00000563184 NEO1Q92859 1461 aa1.31□□□□□ -2.2
LINC00557-201ENST00000563184 C2orf70A6NJV1 201 aa1.3□□□□□ -2.2
LINC00557-201ENST00000563184 TCRBP04435 133 aa1.3□□□□□ -2.2
LINC00557-201ENST00000563184 COX6A1P12074 109 aa1.3□□□□□ -2.2
LINC00557-201ENST00000563184 KHDC3LQ587J8 217 aa1.3□□□□□ -2.2
LINC00557-201ENST00000563184 DPPA3Q6W0C5 159 aa1.3□□□□□ -2.2
LINC00557-201ENST00000563184 HIST3H2BBQ8N257 126 aa1.3□□□□□ -2.2
LINC00557-201ENST00000563184 C12orf45Q8N5I9 185 aaPredicted RBP1.3□□□□□ -2.2
LINC00557-201ENST00000563184 OR4E2Q8NGC2 313 aa1.3□□□□□ -2.2
LINC00557-201ENST00000563184 OR4C6Q8NH72 309 aa1.3□□□□□ -2.2
LINC00557-201ENST00000563184 C22orf24Q9Y442 160 aa1.3□□□□□ -2.2
LINC00557-201ENST00000563184 SNURFQ9Y675 71 aa1.3□□□□□ -2.2
LINC00557-201ENST00000563184 RIC1Q4ADV7 1423 aa1.3□□□□□ -2.2
LINC00557-201ENST00000563184 TRAV1-1A0A0B4J248 108 aa1.29□□□□□ -2.2
LINC00557-201ENST00000563184 SMIM9A6NGZ8 99 aa1.29□□□□□ -2.2
LINC00557-201ENST00000563184 RPP14O95059 124 aaKnown RBP1.29□□□□□ -2.2
LINC00557-201ENST00000563184 MIFP14174 115 aa1.29□□□□□ -2.2
LINC00557-201ENST00000563184 RHEBQ15382 184 aa1.29□□□□□ -2.2
LINC00557-201ENST00000563184 LINC00311Q8N616 119 aa1.29□□□□□ -2.2
LINC00557-201ENST00000563184 DCSTAMPQ9H295 470 aa1.29□□□□□ -2.2
LINC00557-201ENST00000563184 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.29□□□□□ -2.2
LINC00557-201ENST00000563184 V9GYY5 206 aaPredicted RBP1.29□□□□□ -2.2
LINC00557-201ENST00000563184 ZFYVE9O95405 1425 aa1.29□□□□□ -2.2
LINC00557-201ENST00000563184 IGKV2D-26A0A0A0MRZ7 120 aa1.28□□□□□ -2.2
LINC00557-201ENST00000563184 PIRO00625 290 aa1.28□□□□□ -2.2
LINC00557-201ENST00000563184 GEMIN2O14893 280 aaKnown RBP1.28□□□□□ -2.2
LINC00557-201ENST00000563184 CEBPGP53567 150 aa1.28□□□□□ -2.2
LINC00557-201ENST00000563184 PDE6HQ13956 83 aa1.28□□□□□ -2.2
LINC00557-201ENST00000563184 CDK10Q15131 360 aa1.28□□□□□ -2.2
LINC00557-201ENST00000563184 RGS21Q2M5E4 152 aa1.28□□□□□ -2.2
LINC00557-201ENST00000563184 IAH1Q2TAA2 248 aaPredicted RBP1.28□□□□□ -2.2
LINC00557-201ENST00000563184 MIXL1Q9H2W2 232 aa1.28□□□□□ -2.2
LINC00557-201ENST00000563184 ECM29Q5VYK3 1845 aa1.28□□□□□ -2.2
LINC00557-201ENST00000563184 DOCK3Q8IZD9 2030 aa1.27□□□□□ -2.21
LINC00557-201ENST00000563184 GOLGA6L19H0YKK7 550 aa1.27□□□□□ -2.21
LINC00557-201ENST00000563184 C19orf84I3L1E1 186 aa1.27□□□□□ -2.21
LINC00557-201ENST00000563184 E2F6O75461 281 aa1.27□□□□□ -2.21
LINC00557-201ENST00000563184 BRS3P32247 399 aa1.27□□□□□ -2.21
LINC00557-201ENST00000563184 SPANXN5Q5MJ07 72 aa1.27□□□□□ -2.21
LINC00557-201ENST00000563184 PHF13Q86YI8 300 aaPredicted RBP1.27□□□□□ -2.21
LINC00557-201ENST00000563184 TNRC6AQ8NDV7 1962 aaKnown RBP1.27□□□□□ -2.21
LINC00557-201ENST00000563184 hADV38S2A0JD32 116 aa1.26□□□□□ -2.21
LINC00557-201ENST00000563184 OR1I1O60431 355 aa1.26□□□□□ -2.21
LINC00557-201ENST00000563184 ZNF682O95780 498 aa1.26□□□□□ -2.21
LINC00557-201ENST00000563184 TCL1BO95988 128 aa1.26□□□□□ -2.21
LINC00557-201ENST00000563184 RBP1P09455 135 aa1.26□□□□□ -2.21
LINC00557-201ENST00000563184 SSR2P43308 183 aa1.26□□□□□ -2.21
LINC00557-201ENST00000563184 C12orf74Q32Q52 190 aa1.26□□□□□ -2.21
LINC00557-201ENST00000563184 LINC01554Q52M75 96 aa1.26□□□□□ -2.21
LINC00557-201ENST00000563184 FAM19A2Q8N3H0 131 aa1.26□□□□□ -2.21
LINC00557-201ENST00000563184 RNASE7Q9H1E1 156 aaKnown RBP1.26□□□□□ -2.21
LINC00557-201ENST00000563184 OSTCQ9NRP0 149 aa1.26□□□□□ -2.21
LINC00557-201ENST00000563184 C14orf105Q9NVL8 296 aa1.26□□□□□ -2.21
LINC00557-201ENST00000563184 UBAP1Q9NZ09 502 aa1.26□□□□□ -2.21
LINC00557-201ENST00000563184 CYSLTR1Q9Y271 337 aa1.26□□□□□ -2.21
LINC00557-201ENST00000563184 PRELID3BQ9Y3B1 194 aa1.26□□□□□ -2.21
LINC00557-201ENST00000563184 SCN10AQ9Y5Y9 1956 aa1.26□□□□□ -2.21
LINC00557-201ENST00000563184 CEP192Q8TEP8 1941 aa1.26□□□□□ -2.21
LINC00557-201ENST00000563184 MYO3BQ8WXR4 1341 aa1.25□□□□□ -2.21
LINC00557-201ENST00000563184 PRB3Q04118 309 aaPredicted RBP1.25□□□□□ -2.21
LINC00557-201ENST00000563184 RNASE10Q5GAN6 216 aaKnown RBP1.25□□□□□ -2.21
LINC00557-201ENST00000563184 CT55Q8WUE5 264 aa1.25□□□□□ -2.21
LINC00557-201ENST00000563184 BORCS7Q96B45 105 aa1.25□□□□□ -2.21
LINC00557-201ENST00000563184 CMSS1Q9BQ75 279 aaKnown RBP1.25□□□□□ -2.21
LINC00557-201ENST00000563184 TAS2R4Q9NYW5 299 aa1.25□□□□□ -2.21
LINC00557-201ENST00000563184 SCN3AQ9NY46 2000 aa1.24□□□□□ -2.21
LINC00557-201ENST00000563184 LOC110117498A0A087WWA1 95 aa1.24□□□□□ -2.21
LINC00557-201ENST00000563184 A0A087WX48 190 aa1.24□□□□□ -2.21
LINC00557-201ENST00000563184 BAALC-AS2P0C853 105 aa1.24□□□□□ -2.21
LINC00557-201ENST00000563184 ZNF93P35789 620 aaPredicted RBP1.24□□□□□ -2.21
LINC00557-201ENST00000563184 CDKN2CP42773 168 aa1.24□□□□□ -2.21
LINC00557-201ENST00000563184 EDDM3AQ14507 147 aa1.24□□□□□ -2.21
LINC00557-201ENST00000563184 KRT222Q8N1A0 295 aa1.24□□□□□ -2.21
LINC00557-201ENST00000563184 GDPD1Q8N9F7 314 aa1.24□□□□□ -2.21
LINC00557-201ENST00000563184 CCDC90BQ9GZT6 254 aa1.24□□□□□ -2.21
LINC00557-201ENST00000563184 UQCC1Q9NVA1 299 aa1.24□□□□□ -2.21
LINC00557-201ENST00000563184 UBL3O95164 117 aa1.23□□□□□ -2.21
LINC00557-201ENST00000563184 S100A6P06703 90 aa1.23□□□□□ -2.21
LINC00557-201ENST00000563184 OOSP2Q86WS3 158 aa1.23□□□□□ -2.21
LINC00557-201ENST00000563184 OR6V1Q8N148 313 aa1.23□□□□□ -2.21
LINC00557-201ENST00000563184 OR13D1Q8NGV5 346 aa1.23□□□□□ -2.21
LINC00557-201ENST00000563184 PPP1R14BQ96C90 147 aa1.23□□□□□ -2.21
LINC00557-201ENST00000563184 IDI2-AS1Q9NZ38 188 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms