RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 PIGBOS1A0A0B4J2F0 54 aa13.13□□□□□ -0.31
SMAD3-210ENST00000559092 CCDC160A6NGH7 325 aa13.13□□□□□ -0.31
SMAD3-210ENST00000559092 OR4C46A6NHA9 309 aa13.13□□□□□ -0.31
SMAD3-210ENST00000559092 CHEK1O14757 476 aa13.13□□□□□ -0.31
SMAD3-210ENST00000559092 TMEM50AO95807 157 aa13.13□□□□□ -0.31
SMAD3-210ENST00000559092 TMEM187Q14656 261 aa13.13□□□□□ -0.31
SMAD3-210ENST00000559092 PYDC2Q56P42 97 aa13.13□□□□□ -0.31
SMAD3-210ENST00000559092 GINS3Q9BRX5 216 aa13.13□□□□□ -0.31
SMAD3-210ENST00000559092 GGTLC1Q9BX51 225 aa13.13□□□□□ -0.31
SMAD3-210ENST00000559092 CACNG5Q9UF02 275 aa13.13□□□□□ -0.31
SMAD3-210ENST00000559092 SCGB2A1O75556 95 aa13.12□□□□□ -0.31
SMAD3-210ENST00000559092 BMI1P35226 326 aa13.12□□□□□ -0.31
SMAD3-210ENST00000559092 CMC4P56277 68 aaPredicted RBP13.12□□□□□ -0.31
SMAD3-210ENST00000559092 KLF9Q13886 244 aaPredicted RBP13.12□□□□□ -0.31
SMAD3-210ENST00000559092 TOMM20LQ6UXN7 152 aa13.12□□□□□ -0.31
SMAD3-210ENST00000559092 ZNF600Q6ZNG1 722 aa13.12□□□□□ -0.31
SMAD3-210ENST00000559092 OR4X1Q8NH49 305 aa13.12□□□□□ -0.31
SMAD3-210ENST00000559092 TRIM63Q969Q1 353 aa13.12□□□□□ -0.31
SMAD3-210ENST00000559092 TMEM230Q96A57 120 aa13.12□□□□□ -0.31
SMAD3-210ENST00000559092 RNF2Q99496 336 aa13.12□□□□□ -0.31
SMAD3-210ENST00000559092 RBM38Q9H0Z9 239 aaKnown RBP13.12□□□□□ -0.31
SMAD3-210ENST00000559092 HEYLQ9NQ87 328 aaPredicted RBP13.12□□□□□ -0.31
SMAD3-210ENST00000559092 A0A0B4J2A0 478 aa13.11□□□□□ -0.31
SMAD3-210ENST00000559092 CLN5O75503 358 aa13.11□□□□□ -0.31
SMAD3-210ENST00000559092 SULT1A3P0DMM9 295 aa13.11□□□□□ -0.31
SMAD3-210ENST00000559092 SULT1A4P0DMN0 295 aa13.11□□□□□ -0.31
SMAD3-210ENST00000559092 ANXA3P12429 323 aa13.11□□□□□ -0.31
SMAD3-210ENST00000559092 AKR1C4P17516 323 aa13.11□□□□□ -0.31
SMAD3-210ENST00000559092 OPRK1P41145 380 aa13.11□□□□□ -0.31
SMAD3-210ENST00000559092 SRPXP78539 464 aa13.11□□□□□ -0.31
SMAD3-210ENST00000559092 C2orf83Q53S99 150 aa13.11□□□□□ -0.31
SMAD3-210ENST00000559092 NMSQ5H8A3 153 aa13.11□□□□□ -0.31
SMAD3-210ENST00000559092 TOMM5Q8N4H5 51 aa13.11□□□□□ -0.31
SMAD3-210ENST00000559092 SHPKQ9UHJ6 478 aa13.11□□□□□ -0.31
SMAD3-210ENST00000559092 V9GYH0 126 aa13.11□□□□□ -0.31
SMAD3-210ENST00000559092 TRAV30A0A087WSZ9 112 aa13.1□□□□□ -0.31
SMAD3-210ENST00000559092 RPS10-NUDT3A0A1W2PQS6 291 aa13.1□□□□□ -0.31
SMAD3-210ENST00000559092 CCR6P51684 374 aa13.1□□□□□ -0.31
SMAD3-210ENST00000559092 SUPT4H1P63272 117 aaKnown RBP13.1□□□□□ -0.31
SMAD3-210ENST00000559092 CCDC190Q86UF4 302 aa13.1□□□□□ -0.31
SMAD3-210ENST00000559092 NOXA1Q86UR1 476 aa13.1□□□□□ -0.31
SMAD3-210ENST00000559092 RNASEH2CQ8TDP1 164 aaKnown RBP13.1□□□□□ -0.31
SMAD3-210ENST00000559092 FNDC4Q9H6D8 234 aaPredicted RBP13.1□□□□□ -0.31
SMAD3-210ENST00000559092 PUS1Q9Y606 427 aaKnown RBP eCLIP13.1□□□□□ -0.31
SMAD3-210ENST00000559092 CEBPZOSA8MTT3 80 aa13.09□□□□□ -0.31
SMAD3-210ENST00000559092 RYR3Q15413 4870 aa13.09□□□□□ -0.31
SMAD3-210ENST00000559092 ZNF79Q15937 498 aa13.09□□□□□ -0.31
SMAD3-210ENST00000559092 FAM90A2PQ658T7 463 aa13.09□□□□□ -0.31
SMAD3-210ENST00000559092 LGI3Q8N145 548 aa13.09□□□□□ -0.31
SMAD3-210ENST00000559092 IL17DQ8TAD2 202 aa13.09□□□□□ -0.31
SMAD3-210ENST00000559092 SLC25A21Q9BQT8 299 aaPredicted RBP13.09□□□□□ -0.31
SMAD3-210ENST00000559092 VSIRQ9H7M9 311 aa13.09□□□□□ -0.31
SMAD3-210ENST00000559092 RETNQ9HD89 108 aa13.09□□□□□ -0.31
SMAD3-210ENST00000559092 UBE2CO00762 179 aa13.08□□□□□ -0.32
SMAD3-210ENST00000559092 SLC25A4P12235 298 aa13.08□□□□□ -0.32
SMAD3-210ENST00000559092 APOC4P55056 127 aa13.08□□□□□ -0.32
SMAD3-210ENST00000559092 PAFAH1B2P68402 229 aa13.08□□□□□ -0.32
SMAD3-210ENST00000559092 SMCO1Q147U7 214 aa13.08□□□□□ -0.32
SMAD3-210ENST00000559092 MLANAQ16655 118 aa13.08□□□□□ -0.32
SMAD3-210ENST00000559092 ODF3L2Q3SX64 289 aa13.08□□□□□ -0.32
SMAD3-210ENST00000559092 TMEM128Q5BJH2 165 aa13.08□□□□□ -0.32
SMAD3-210ENST00000559092 SPANXN2Q5MJ10 180 aa13.08□□□□□ -0.32
SMAD3-210ENST00000559092 SLC24A4Q8NFF2 622 aa13.08□□□□□ -0.32
SMAD3-210ENST00000559092 TMEM231Q9H6L2 316 aa13.08□□□□□ -0.32
SMAD3-210ENST00000559092 ZFAND3Q9H8U3 227 aa13.08□□□□□ -0.32
SMAD3-210ENST00000559092 MRPL36Q9P0J6 103 aaKnown RBP13.08□□□□□ -0.32
SMAD3-210ENST00000559092 CSMD3Q7Z407 3707 aa13.08□□□□□ -0.32
SMAD3-210ENST00000559092 IGHV3-49A0A0A0MS15 119 aa13.07□□□□□ -0.32
SMAD3-210ENST00000559092 KIR2DL5BA0A0G2JN68 375 aa13.07□□□□□ -0.32
SMAD3-210ENST00000559092 KIR2DL5BA0A0G2JPC4 375 aa13.07□□□□□ -0.32
SMAD3-210ENST00000559092 A0A1B0GU03 582 aa13.07□□□□□ -0.32
SMAD3-210ENST00000559092 NPPCP23582 126 aa13.07□□□□□ -0.32
SMAD3-210ENST00000559092 ATP5IP56385 69 aaPredicted RBP13.07□□□□□ -0.32
SMAD3-210ENST00000559092 TNFRSF9Q07011 255 aa13.07□□□□□ -0.32
SMAD3-210ENST00000559092 ETFRF1Q6IPR1 90 aa13.07□□□□□ -0.32
SMAD3-210ENST00000559092 Q6ZWC4 215 aa13.07□□□□□ -0.32
SMAD3-210ENST00000559092 LYZL2Q7Z4W2 148 aa13.07□□□□□ -0.32
SMAD3-210ENST00000559092 KIR2DL5AQ8N109 375 aa13.07□□□□□ -0.32
SMAD3-210ENST00000559092 KIR2DL5BQ8NHK3 375 aa13.07□□□□□ -0.32
SMAD3-210ENST00000559092 HSPB7Q9UBY9 170 aa13.07□□□□□ -0.32
SMAD3-210ENST00000559092 UBQLN2Q9UHD9 624 aa13.07□□□□□ -0.32
SMAD3-210ENST00000559092 TP53TG1Q9Y2A0 90 aa13.07□□□□□ -0.32
SMAD3-210ENST00000559092 U3KQ87 197 aa13.07□□□□□ -0.32
SMAD3-210ENST00000559092 DUXBA0A1W2PPF3 345 aa13.06□□□□□ -0.32
SMAD3-210ENST00000559092 A0A1W2PS18 150 aa13.06□□□□□ -0.32
SMAD3-210ENST00000559092 IGKV1-17P01599 117 aa13.06□□□□□ -0.32
SMAD3-210ENST00000559092 OVOL2Q9BRP0 275 aa13.06□□□□□ -0.32
SMAD3-210ENST00000559092 PRR13Q9NZ81 148 aa13.06□□□□□ -0.32
SMAD3-210ENST00000559092 IGHV3OR16-13A0A075B7E8 117 aa13.05□□□□□ -0.32
SMAD3-210ENST00000559092 IGHV3-74A0A0B4J1X5 117 aa13.05□□□□□ -0.32
SMAD3-210ENST00000559092 TRAV2A0A0B4J234 112 aa13.05□□□□□ -0.32
SMAD3-210ENST00000559092 NPY1RP25929 384 aa13.05□□□□□ -0.32
SMAD3-210ENST00000559092 CRYBB3P26998 211 aa13.05□□□□□ -0.32
SMAD3-210ENST00000559092 PRSS54Q6PEW0 395 aa13.05□□□□□ -0.32
SMAD3-210ENST00000559092 TCF24Q7RTU0 167 aa13.05□□□□□ -0.32
SMAD3-210ENST00000559092 TMED4Q7Z7H5 227 aa13.05□□□□□ -0.32
SMAD3-210ENST00000559092 LRTM2Q8N967 370 aa13.05□□□□□ -0.32
SMAD3-210ENST00000559092 OR1S2Q8NGQ3 325 aa13.05□□□□□ -0.32
SMAD3-210ENST00000559092 ST8SIA2Q92186 375 aa13.05□□□□□ -0.32
SMAD3-210ENST00000559092 METTL26Q96S19 204 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms