RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 ZNF676Q8N7Q3 588 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 TMEM161BQ8NDZ6 487 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 PXT1Q8NFP0 134 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 TSTD1Q8NFU3 115 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 GPR32P1Q8NGA4 272 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 OR9Q1Q8NGQ5 310 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 OR13C6PQ8NH95 151 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 JOSD2Q8TAC2 188 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 HAVCR2Q8TDQ0 301 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 MAFIPQ8WZ33 124 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 BORCS7Q96B45 105 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 DGCR14Q96DF8 476 aaKnown RBP0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 PPP3R2Q96LZ3 170 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 KCTD7Q96MP8 289 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 PPP1R2P1Q96PQ5 205 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 OR52E6Q96RD3 313 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 SERPINI1Q99574 410 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 NIPSNAP1Q9BPW8 284 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 GINS4Q9BRT9 223 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 PCBD2Q9H0N5 130 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 OR51I2Q9H344 312 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 RERGLQ9H628 205 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 WDR54Q9H977 334 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 TPT1P8Q9HAU6 139 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 HES4Q9HCC6 221 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 TMEM138Q9NPI0 162 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 XPNPEP1Q9NQW7 623 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 PLEKHJ1Q9NW61 149 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 GID8Q9NWU2 228 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 GLTPQ9NZD2 209 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 COPZ2Q9P299 210 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 VPS29Q9UBQ0 182 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 GUCA1BQ9UMX6 200 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 ERGIC3Q9Y282 383 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 ASB4Q9Y574 426 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 NUBP2Q9Y5Y2 271 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 ZFYVE9O95405 1425 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 WRNQ14191 1432 aaPredicted RBP eCLIP0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 EEA1Q15075 1411 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 ADGRL3Q9HAR2 1447 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 EIF4G3O43432 1585 aaKnown RBP0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 RB1CC1Q8TDY2 1594 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 SMARCA4P51532 1647 aa0.6□□□□□ -2.31
SUPT16H-206ENST00000556309 FAM135BQ49AJ0 1406 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 CEP162Q5TB80 1403 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 ERBINQ96RT1 1412 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 PIGBOS1A0A0B4J2F0 54 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 PQLC2LA1A4F0 135 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 FUOMA2VDF0 154 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 FABP12A6NFH5 140 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 OR4C45A6NMZ5 311 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 EVPLLA8MZ36 301 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 DISC1C4P0D8 188 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 ATP6V1G2-DDX39BF2Z307 99 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 G3V2T6 193 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 H0Y980 276 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 KPNA4O00629 521 aaPredicted RBP0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 LEPROTO15243 131 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 PDE6DO43924 150 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 MFSD11O43934 449 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 NDUFC2O95298 119 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 CRYZL1O95825 349 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 IFNA1P01562 189 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 IFNA4P05014 189 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 REG1AP05451 166 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 RBP1P09455 135 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 FAM228BP0C875 321 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 ERP29P30040 261 aaKnown RBP0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 GUCA1AP43080 201 aaPredicted RBP0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 RPL5P46777 297 aaKnown RBP0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 REG1BP48304 166 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 PIGPP57054 158 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 GNG2P59768 71 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 NCALDP61601 193 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 LSM3P62310 102 aaKnown RBP0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 CAV1Q03135 178 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 AESQ08117 197 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 MGAT3Q09327 533 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 DEFB115Q30KQ5 88 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 RNASE10Q5GAN6 216 aaKnown RBP0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 TNFAIP8L3Q5GJ75 292 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 AKR1C8PQ5T2L2 129 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 FAM78BQ5VT40 261 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 SAMD13Q5VXD3 122 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 SSX8Q7RTT4 187 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 COMMD7Q86VX2 200 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 ANGPTL5Q86XS5 388 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 IFT20Q8IY31 132 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 C8orf59Q8N0T1 100 aaPredicted RBP0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 OR8B3Q8NGG8 313 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 OR5A1Q8NGJ0 315 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 SGMS2Q8NHU3 365 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 GNPDA2Q8TDQ7 276 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 NEK7Q8TDX7 302 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 COPS9Q8WXC6 57 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 RAB8BQ92930 207 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 SLC35B4Q969S0 331 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 PTH2Q96A98 100 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 SMIM19Q96E16 107 aa0.59□□□□□ -2.31
SUPT16H-206ENST00000556309 MALSU1Q96EH3 234 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms