RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 RGS21Q2M5E4 152 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 ACOT6Q3I5F7 207 aaPredicted RBP1.79□□□□□ -2.12
SYNE2-210ENST00000553455 SLC36A1Q7Z2H8 476 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 C9orf163Q8N9P6 203 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 OR5B17Q8NGF7 314 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 OR52E6Q96RD3 313 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 WDR61Q9GZS3 305 aaKnown RBP1.79□□□□□ -2.12
SYNE2-210ENST00000553455 DOK5Q9P104 306 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 VPS29Q9UBQ0 182 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 PKIGQ9Y2B9 76 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 TTC21AQ8NDW8 1320 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 ARHGEF10O15013 1369 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 KIF24Q5T7B8 1368 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 BCL9O00512 1426 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 RALGAPBQ86X10 1494 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 TULP4Q9NRJ4 1543 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 TRPM1Q7Z4N2 1603 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 USP32Q8NFA0 1604 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 NALCNQ8IZF0 1738 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 MAST2Q6P0Q8 1798 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 HEATR5AQ86XA9 2040 aa1.79□□□□□ -2.12
SYNE2-210ENST00000553455 EP400Q96L91 3159 aa1.78□□□□□ -2.12
SYNE2-210ENST00000553455 MUC6Q6W4X9 2439 aa1.78□□□□□ -2.12
SYNE2-210ENST00000553455 RTTNQ86VV8 2226 aa1.78□□□□□ -2.12
SYNE2-210ENST00000553455 RGPD8O14715 1765 aaPredicted RBP1.78□□□□□ -2.12
SYNE2-210ENST00000553455 PHLPP1O60346 1717 aa1.78□□□□□ -2.12
SYNE2-210ENST00000553455 ARHGEF28Q8N1W1 1705 aaKnown RBP1.78□□□□□ -2.12
SYNE2-210ENST00000553455 KIF1AQ12756 1690 aa1.78□□□□□ -2.12
SYNE2-210ENST00000553455 USP54Q70EL1 1684 aa1.78□□□□□ -2.12
SYNE2-210ENST00000553455 ALS2Q96Q42 1657 aa1.78□□□□□ -2.12
SYNE2-210ENST00000553455 ATP7BP35670 1465 aa1.78□□□□□ -2.12
SYNE2-210ENST00000553455 CD163L1Q9NR16 1453 aa1.78□□□□□ -2.12
SYNE2-210ENST00000553455 NOS1APO75052 506 aaPredicted RBP1.78□□□□□ -2.12
SYNE2-210ENST00000553455 ZNF705BP0CI00 300 aaPredicted RBP1.78□□□□□ -2.12
SYNE2-210ENST00000553455 Q6ZS49 121 aa1.78□□□□□ -2.12
SYNE2-210ENST00000553455 CCDC42Q96M95 316 aa1.78□□□□□ -2.12
SYNE2-210ENST00000553455 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
SYNE2-210ENST00000553455 NWD2Q9ULI1 1742 aa1.77□□□□□ -2.13
SYNE2-210ENST00000553455 MED1Q15648 1581 aaPredicted RBP1.77□□□□□ -2.13
SYNE2-210ENST00000553455 ABCC6O95255 1503 aa1.77□□□□□ -2.13
SYNE2-210ENST00000553455 TNS3Q68CZ2 1445 aa1.77□□□□□ -2.13
SYNE2-210ENST00000553455 SRCAPQ6ZRS2 3230 aa1.77□□□□□ -2.13
SYNE2-210ENST00000553455 ROCK2O75116 1388 aaKnown RBP1.77□□□□□ -2.13
SYNE2-210ENST00000553455 IGKV1D-43A0A0B4J1Z2 117 aa1.77□□□□□ -2.13
SYNE2-210ENST00000553455 CLDN24A6NM45 220 aa1.77□□□□□ -2.13
SYNE2-210ENST00000553455 KPNA3O00505 521 aaPredicted RBP1.77□□□□□ -2.13
SYNE2-210ENST00000553455 RPS17P08708 135 aaKnown RBP1.77□□□□□ -2.13
SYNE2-210ENST00000553455 CD79AP11912 226 aa1.77□□□□□ -2.13
SYNE2-210ENST00000553455 LSM6P62312 80 aaKnown RBP1.77□□□□□ -2.13
SYNE2-210ENST00000553455 KISS1Q15726 138 aa1.77□□□□□ -2.13
SYNE2-210ENST00000553455 C20orf196Q8IYI0 205 aa1.77□□□□□ -2.13
SYNE2-210ENST00000553455 CLDN22Q8N7P3 220 aa1.77□□□□□ -2.13
SYNE2-210ENST00000553455 ZNF565Q8N9K5 539 aa1.77□□□□□ -2.13
SYNE2-210ENST00000553455 ZNF563Q8TA94 476 aa1.77□□□□□ -2.13
SYNE2-210ENST00000553455 MRPL27Q9P0M9 148 aaKnown RBP1.77□□□□□ -2.13
SYNE2-210ENST00000553455 TP73-AS1Q9UF72 201 aa1.77□□□□□ -2.13
SYNE2-210ENST00000553455 MARF1Q9Y4F3 1742 aaKnown RBP1.77□□□□□ -2.13
SYNE2-210ENST00000553455 CRYBG1Q9Y4K1 1723 aa1.77□□□□□ -2.13
SYNE2-210ENST00000553455 TRIOBPQ9H2D6 2365 aa1.77□□□□□ -2.13
SYNE2-210ENST00000553455 TOPAZ1Q8N9V7 1692 aa1.77□□□□□ -2.13
SYNE2-210ENST00000553455 LRP6O75581 1613 aa1.77□□□□□ -2.13
SYNE2-210ENST00000553455 ZFHX2Q9C0A1 2572 aaPredicted RBP1.76□□□□□ -2.13
SYNE2-210ENST00000553455 EDC4Q6P2E9 1401 aaKnown RBP1.76□□□□□ -2.13
SYNE2-210ENST00000553455 PPIP5K1Q6PFW1 1433 aa1.76□□□□□ -2.13
SYNE2-210ENST00000553455 ANKRD36BQ8N2N9 1353 aa1.76□□□□□ -2.13
SYNE2-210ENST00000553455 TONSLQ96HA7 1378 aa1.76□□□□□ -2.13
SYNE2-210ENST00000553455 TRGV2A0A075B6R0 118 aa1.76□□□□□ -2.13
SYNE2-210ENST00000553455 TRBV10-2A0A0K0K1G8 114 aa1.76□□□□□ -2.13
SYNE2-210ENST00000553455 MEIS3P1A6NDR6 274 aa1.76□□□□□ -2.13
SYNE2-210ENST00000553455 FABP5P3A8MUU1 101 aa1.76□□□□□ -2.13
SYNE2-210ENST00000553455 PSMD12O00232 456 aaPredicted RBP1.76□□□□□ -2.13
SYNE2-210ENST00000553455 FAAHO00519 579 aa1.76□□□□□ -2.13
SYNE2-210ENST00000553455 HLA-DRB1P01911 266 aa1.76□□□□□ -2.13
SYNE2-210ENST00000553455 TRGC1P0CF51 173 aa1.76□□□□□ -2.13
SYNE2-210ENST00000553455 PSME3P61289 254 aa1.76□□□□□ -2.13
SYNE2-210ENST00000553455 SNRPD2P62316 118 aaKnown RBP1.76□□□□□ -2.13
SYNE2-210ENST00000553455 RANP62826 216 aaKnown RBP1.76□□□□□ -2.13
SYNE2-210ENST00000553455 MOGQ16653 247 aa1.76□□□□□ -2.13
SYNE2-210ENST00000553455 IBA57Q5T440 356 aaKnown RBP1.76□□□□□ -2.13
SYNE2-210ENST00000553455 TRAPPC5Q8IUR0 188 aa1.76□□□□□ -2.13
SYNE2-210ENST00000553455 MRPL30Q8TCC3 161 aaKnown RBP1.76□□□□□ -2.13
SYNE2-210ENST00000553455 DERL1Q9BUN8 251 aa1.76□□□□□ -2.13
SYNE2-210ENST00000553455 AKAP12Q02952 1782 aa1.76□□□□□ -2.13
SYNE2-210ENST00000553455 ITSN1Q15811 1721 aa1.76□□□□□ -2.13
SYNE2-210ENST00000553455 LMO7Q8WWI1 1683 aa1.76□□□□□ -2.13
SYNE2-210ENST00000553455 PHRF1Q9P1Y6 1649 aaKnown RBP1.76□□□□□ -2.13
SYNE2-210ENST00000553455 NRKQ7Z2Y5 1582 aa1.76□□□□□ -2.13
SYNE2-210ENST00000553455 OVOS2A0A0J9YW53 1432 aa1.75□□□□□ -2.13
SYNE2-210ENST00000553455 DISP2A7MBM2 1401 aa1.75□□□□□ -2.13
SYNE2-210ENST00000553455 OVOS2Q6IE36 1432 aa1.75□□□□□ -2.13
SYNE2-210ENST00000553455 SDK1Q7Z5N4 2213 aa1.75□□□□□ -2.13
SYNE2-210ENST00000553455 COL14A1Q05707 1796 aaKnown RBP1.75□□□□□ -2.13
SYNE2-210ENST00000553455 KTN1Q86UP2 1357 aaKnown RBP1.75□□□□□ -2.13
SYNE2-210ENST00000553455 COL4A1P02462 1669 aa1.75□□□□□ -2.13
SYNE2-210ENST00000553455 IBA57-AS1B1ANH7 110 aa1.75□□□□□ -2.13
SYNE2-210ENST00000553455 SLC22A1O15245 554 aa1.75□□□□□ -2.13
SYNE2-210ENST00000553455 IGKV1-5P01602 117 aa1.75□□□□□ -2.13
SYNE2-210ENST00000553455 TCRBP04435 133 aa1.75□□□□□ -2.13
SYNE2-210ENST00000553455 GPX2P18283 190 aa1.75□□□□□ -2.13
SYNE2-210ENST00000553455 RPL5P46777 297 aaKnown RBP1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms