RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 AREGP15514 252 aa6.62□□□□□ -1.35
RAB5B-210ENST00000553116 TMEM11P17152 192 aa6.62□□□□□ -1.35
RAB5B-210ENST00000553116 UBE2E1P51965 193 aa6.62□□□□□ -1.35
RAB5B-210ENST00000553116 MLANAQ16655 118 aa6.62□□□□□ -1.35
RAB5B-210ENST00000553116 P2RX4Q99571 388 aa6.62□□□□□ -1.35
RAB5B-210ENST00000553116 VPS13CQ709C8 3753 aa6.62□□□□□ -1.35
RAB5B-210ENST00000553116 SVEP1Q4LDE5 3571 aa6.62□□□□□ -1.35
RAB5B-210ENST00000553116 TRAV1-1A0A0B4J248 108 aa6.62□□□□□ -1.35
RAB5B-210ENST00000553116 CGB1A6NKQ9 187 aa6.62□□□□□ -1.35
RAB5B-210ENST00000553116 FCN1O00602 326 aa6.62□□□□□ -1.35
RAB5B-210ENST00000553116 BCL2P10415 239 aa6.62□□□□□ -1.35
RAB5B-210ENST00000553116 SAA4P35542 130 aa6.62□□□□□ -1.35
RAB5B-210ENST00000553116 PAX2Q02962 417 aa6.62□□□□□ -1.35
RAB5B-210ENST00000553116 ODF1Q14990 250 aa6.62□□□□□ -1.35
RAB5B-210ENST00000553116 TMEM144Q7Z5S9 345 aa6.62□□□□□ -1.35
RAB5B-210ENST00000553116 MBD3L1Q8WWY6 194 aa6.62□□□□□ -1.35
RAB5B-210ENST00000553116 CFHR4Q92496 578 aa6.62□□□□□ -1.35
RAB5B-210ENST00000553116 TMPRSS5Q9H3S3 457 aa6.62□□□□□ -1.35
RAB5B-210ENST00000553116 CARHSP1Q9Y2V2 147 aaKnown RBP6.62□□□□□ -1.35
RAB5B-210ENST00000553116 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.62□□□□□ -1.351e-6■■■□□ 19.2
RAB5B-210ENST00000553116 IGHV3-21A0A0B4J1V1 117 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 A0A1B0GW64 132 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 OOSP1A8MZH6 123 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 MDKP21741 143 aaPredicted RBP6.61□□□□□ -1.35
RAB5B-210ENST00000553116 OR10J1P30954 320 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 C19orf35Q6ZS72 473 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 DYNAPQ8N1N2 210 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 OR2T6Q8NHC8 308 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 RNASEH2CQ8TDP1 164 aaKnown RBP6.61□□□□□ -1.35
RAB5B-210ENST00000553116 TBL2Q9Y4P3 447 aaKnown RBP6.61□□□□□ -1.35
RAB5B-210ENST00000553116 CELSR2Q9HCU4 2923 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 IGLC7A0M8Q6 106 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 PHOX2AO14813 284 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 CRYGBP07316 175 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 BRS3P32247 399 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 PSMB3P49720 205 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 ICAM4Q14773 271 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 BSXQ3C1V8 233 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 KHDC3LQ587J8 217 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 ZNF506Q5JVG8 444 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 CYB561D1Q8N8Q1 229 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 FAM103A1Q9BTL3 118 aaKnown RBP6.61□□□□□ -1.35
RAB5B-210ENST00000553116 SMDT1Q9H4I9 107 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 LSM4Q9Y4Z0 139 aaKnown RBP6.61□□□□□ -1.35
RAB5B-210ENST00000553116 PUS1Q9Y606 427 aaKnown RBP eCLIP6.61□□□□□ -1.35
RAB5B-210ENST00000553116 TRAV40A0A0B4J280 105 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 LOC102723971A0A1B0GUV8 181 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 C5orf52A6NGY3 159 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 FNDC10F2Z333 226 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 FAM106CPP0CH98 169 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 GATA2P23769 480 aaPredicted RBP6.61□□□□□ -1.35
RAB5B-210ENST00000553116 FXYD3Q14802 87 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 CLEC12BQ2HXU8 276 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 CACNG8Q8WXS5 425 aa6.61□□□□□ -1.35
RAB5B-210ENST00000553116 NAV2Q8IVL1 2488 aa6.6□□□□□ -1.35
RAB5B-210ENST00000553116 INS-IGF2F8WCM5 200 aa6.6□□□□□ -1.35
RAB5B-210ENST00000553116 NPFFO15130 113 aa6.6□□□□□ -1.35
RAB5B-210ENST00000553116 MT-CO2P00403 227 aa6.6□□□□□ -1.35
RAB5B-210ENST00000553116 S100A8P05109 93 aa6.6□□□□□ -1.35
RAB5B-210ENST00000553116 ZNF25P17030 456 aaPredicted RBP6.6□□□□□ -1.35
RAB5B-210ENST00000553116 RND2P52198 227 aa6.6□□□□□ -1.35
RAB5B-210ENST00000553116 BATFQ16520 125 aa6.6□□□□□ -1.35
RAB5B-210ENST00000553116 C5orf64Q2M2E5 130 aa6.6□□□□□ -1.35
RAB5B-210ENST00000553116 MRGPRG-AS1Q2M3A8 158 aa6.6□□□□□ -1.35
RAB5B-210ENST00000553116 NPIPB3Q92617 1050 aa6.6□□□□□ -1.35
RAB5B-210ENST00000553116 MALSU1Q96EH3 234 aa6.6□□□□□ -1.35
RAB5B-210ENST00000553116 SCRT1Q9BWW7 348 aa6.6□□□□□ -1.35
RAB5B-210ENST00000553116 HSPB1P04792 205 aaKnown RBP6.6□□□□□ -1.35
RAB5B-210ENST00000553116 RPS10P46783 165 aaKnown RBP6.6□□□□□ -1.35
RAB5B-210ENST00000553116 RPL29P47914 159 aaKnown RBP6.6□□□□□ -1.35
RAB5B-210ENST00000553116 UBE2G2P60604 165 aa6.6□□□□□ -1.35
RAB5B-210ENST00000553116 RHOBP62745 196 aa6.6□□□□□ -1.35
RAB5B-210ENST00000553116 FAM78BQ5VT40 261 aa6.6□□□□□ -1.35
RAB5B-210ENST00000553116 RUSC1-AS1Q66K80 236 aa6.6□□□□□ -1.35
RAB5B-210ENST00000553116 COLCA2A8K830 154 aa6.6□□□□□ -1.35
RAB5B-210ENST00000553116 SRP19P09132 144 aaKnown RBP6.6□□□□□ -1.35
RAB5B-210ENST00000553116 DSCR9P59020 149 aa6.6□□□□□ -1.35
RAB5B-210ENST00000553116 C10orf91Q5T1B1 145 aa6.6□□□□□ -1.35
RAB5B-210ENST00000553116 SLC35E3Q7Z769 313 aa6.6□□□□□ -1.35
RAB5B-210ENST00000553116 HIST1H2BAQ96A08 127 aa6.6□□□□□ -1.35
RAB5B-210ENST00000553116 FNDC4Q9H6D8 234 aaPredicted RBP6.6□□□□□ -1.35
RAB5B-210ENST00000553116 C7orf69Q9H7B7 122 aa6.6□□□□□ -1.35
RAB5B-210ENST00000553116 C1RLQ9NZP8 487 aa6.6□□□□□ -1.35
RAB5B-210ENST00000553116 VAX2Q9UIW0 290 aa6.6□□□□□ -1.35
RAB5B-210ENST00000553116 IGKV1OR2-108A0A075B7D4 117 aa6.59□□□□□ -1.35
RAB5B-210ENST00000553116 VWC2LB2RUY7 222 aa6.59□□□□□ -1.35
RAB5B-210ENST00000553116 CORTO00230 105 aa6.59□□□□□ -1.35
RAB5B-210ENST00000553116 EREGO14944 169 aa6.59□□□□□ -1.35
RAB5B-210ENST00000553116 ARL14EPLP0DKL9 152 aa6.59□□□□□ -1.35
RAB5B-210ENST00000553116 ZNF674Q2M3X9 581 aa6.59□□□□□ -1.35
RAB5B-210ENST00000553116 CST9LP1Q5W188 147 aa6.59□□□□□ -1.35
RAB5B-210ENST00000553116 BRD3OSQ6XYD6 125 aa6.59□□□□□ -1.35
RAB5B-210ENST00000553116 OR1P1Q8NH06 330 aa6.59□□□□□ -1.35
RAB5B-210ENST00000553116 OR4F5Q8NH21 305 aa6.59□□□□□ -1.35
RAB5B-210ENST00000553116 C1orf159Q96HA4 380 aa6.59□□□□□ -1.35
RAB5B-210ENST00000553116 OR4F4Q96R69 305 aa6.59□□□□□ -1.35
RAB5B-210ENST00000553116 NIPSNAP3BQ9BS92 247 aa6.59□□□□□ -1.35
RAB5B-210ENST00000553116 MANBALQ9NQG1 85 aa6.59□□□□□ -1.35
RAB5B-210ENST00000553116 DOK5Q9P104 306 aa6.59□□□□□ -1.35
RAB5B-210ENST00000553116 CENPVL3A0A0U1RRI6 287 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms