RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 PVRIGQ6DKI7 326 aa11.49□□□□□ -0.57
BRF1-220ENST00000552127 ENY2Q9NPA8 101 aa11.49□□□□□ -0.57
BRF1-220ENST00000552127 SCP2D1Q9UJQ7 156 aa11.49□□□□□ -0.57
BRF1-220ENST00000552127 CCDC160A6NGH7 325 aa11.48□□□□□ -0.57
BRF1-220ENST00000552127 TSPAN4O14817 238 aa11.48□□□□□ -0.57
BRF1-220ENST00000552127 SUB1P53999 127 aaKnown RBP eCLIP11.48□□□□□ -0.57
BRF1-220ENST00000552127 TMEM268Q5VZI3 342 aa11.48□□□□□ -0.57
BRF1-220ENST00000552127 LAMTOR1Q6IAA8 161 aa11.48□□□□□ -0.57
BRF1-220ENST00000552127 Q6ZRM9 215 aa11.48□□□□□ -0.57
BRF1-220ENST00000552127 SELENOHQ8IZQ5 122 aaKnown RBP11.48□□□□□ -0.57
BRF1-220ENST00000552127 OR10C1Q96KK4 312 aa11.48□□□□□ -0.57
BRF1-220ENST00000552127 KRTAP4-5Q9BYR2 181 aa11.48□□□□□ -0.57
BRF1-220ENST00000552127 MCUBQ9NWR8 336 aa11.48□□□□□ -0.57
BRF1-220ENST00000552127 IGHV7-4-1A0A0J9YVY3 117 aa11.47□□□□□ -0.57
BRF1-220ENST00000552127 YIF1AO95070 293 aa11.47□□□□□ -0.57
BRF1-220ENST00000552127 MED14OSP0DP75 135 aa11.47□□□□□ -0.57
BRF1-220ENST00000552127 NPBWR1P48145 328 aa11.47□□□□□ -0.57
BRF1-220ENST00000552127 SPCS3P61009 180 aa11.47□□□□□ -0.57
BRF1-220ENST00000552127 DUSP18Q8NEJ0 188 aa11.47□□□□□ -0.57
BRF1-220ENST00000552127 OR52E5Q8NH55 327 aa11.47□□□□□ -0.57
BRF1-220ENST00000552127 TMEM230Q96A57 120 aa11.47□□□□□ -0.57
BRF1-220ENST00000552127 SCGB3A2Q96PL1 93 aa11.47□□□□□ -0.57
BRF1-220ENST00000552127 GGTLC1Q9BX51 225 aa11.47□□□□□ -0.57
BRF1-220ENST00000552127 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.47□□□□□ -0.57
BRF1-220ENST00000552127 CACNG5Q9UF02 275 aa11.47□□□□□ -0.57
BRF1-220ENST00000552127 SMPXQ9UHP9 88 aa11.47□□□□□ -0.57
BRF1-220ENST00000552127 TMEM56-RWDD3S4R434 201 aa11.47□□□□□ -0.57
BRF1-220ENST00000552127 BSXQ3C1V8 233 aa11.46□□□□□ -0.57
BRF1-220ENST00000552127 TMEM116Q8NCL8 245 aa11.46□□□□□ -0.57
BRF1-220ENST00000552127 IL22RA2Q969J5 263 aa11.46□□□□□ -0.57
BRF1-220ENST00000552127 TRIM63Q969Q1 353 aa11.46□□□□□ -0.57
BRF1-220ENST00000552127 GPR146Q96CH1 333 aa11.46□□□□□ -0.57
BRF1-220ENST00000552127 GALNT14Q96FL9 552 aa11.46□□□□□ -0.57
BRF1-220ENST00000552127 RBM38Q9H0Z9 239 aaKnown RBP11.46□□□□□ -0.57
BRF1-220ENST00000552127 V9GYH0 126 aa11.46□□□□□ -0.57
BRF1-220ENST00000552127 LOC102724200A0A096LPH7 203 aaPredicted RBP11.45□□□□□ -0.58
BRF1-220ENST00000552127 OR4C46A6NHA9 309 aa11.45□□□□□ -0.58
BRF1-220ENST00000552127 CHEK1O14757 476 aa11.45□□□□□ -0.58
BRF1-220ENST00000552127 FAUP35544 74 aaKnown RBP11.45□□□□□ -0.58
BRF1-220ENST00000552127 OPRK1P41145 380 aa11.45□□□□□ -0.58
BRF1-220ENST00000552127 KLF9Q13886 244 aaPredicted RBP11.45□□□□□ -0.58
BRF1-220ENST00000552127 TMEM187Q14656 261 aa11.45□□□□□ -0.58
BRF1-220ENST00000552127 PYDC2Q56P42 97 aa11.45□□□□□ -0.58
BRF1-220ENST00000552127 RNF2Q99496 336 aa11.45□□□□□ -0.58
BRF1-220ENST00000552127 GINS3Q9BRX5 216 aa11.45□□□□□ -0.58
BRF1-220ENST00000552127 RHPN1-AS1Q9BWJ2 59 aa11.45□□□□□ -0.58
BRF1-220ENST00000552127 PRR13Q9NZ81 148 aa11.45□□□□□ -0.58
BRF1-220ENST00000552127 UBQLN2Q9UHD9 624 aa11.45□□□□□ -0.58
BRF1-220ENST00000552127 KCNIP3Q9Y2W7 256 aa11.45□□□□□ -0.58
BRF1-220ENST00000552127 IGHV3-49A0A0A0MS15 119 aa11.44□□□□□ -0.58
BRF1-220ENST00000552127 TRAV14DV4A0A0A6YYC5 116 aa11.44□□□□□ -0.58
BRF1-220ENST00000552127 CXorf65A6NEN9 183 aa11.44□□□□□ -0.58
BRF1-220ENST00000552127 S100A5P33763 92 aa11.44□□□□□ -0.58
BRF1-220ENST00000552127 HTR2BP41595 481 aa11.44□□□□□ -0.58
BRF1-220ENST00000552127 AP3S2P59780 193 aa11.44□□□□□ -0.58
BRF1-220ENST00000552127 PMS2P11Q13670 270 aa11.44□□□□□ -0.58
BRF1-220ENST00000552127 ZNF79Q15937 498 aa11.44□□□□□ -0.58
BRF1-220ENST00000552127 ODF3L2Q3SX64 289 aa11.44□□□□□ -0.58
BRF1-220ENST00000552127 TOMM20LQ6UXN7 152 aa11.44□□□□□ -0.58
BRF1-220ENST00000552127 ZNF600Q6ZNG1 722 aa11.44□□□□□ -0.58
BRF1-220ENST00000552127 FNDC4Q9H6D8 234 aaPredicted RBP11.44□□□□□ -0.58
BRF1-220ENST00000552127 ZFAND3Q9H8U3 227 aa11.44□□□□□ -0.58
BRF1-220ENST00000552127 HEYLQ9NQ87 328 aaPredicted RBP11.44□□□□□ -0.58
BRF1-220ENST00000552127 MRPL36Q9P0J6 103 aaKnown RBP11.44□□□□□ -0.58
BRF1-220ENST00000552127 CEBPZOSA8MTT3 80 aa11.43□□□□□ -0.58
BRF1-220ENST00000552127 TMEM50AO95807 157 aa11.43□□□□□ -0.58
BRF1-220ENST00000552127 SULT1A3P0DMM9 295 aa11.43□□□□□ -0.58
BRF1-220ENST00000552127 SULT1A4P0DMN0 295 aa11.43□□□□□ -0.58
BRF1-220ENST00000552127 AKR1C4P17516 323 aa11.43□□□□□ -0.58
BRF1-220ENST00000552127 SUPT4H1P63272 117 aaKnown RBP11.43□□□□□ -0.58
BRF1-220ENST00000552127 TOMM5Q8N4H5 51 aa11.43□□□□□ -0.58
BRF1-220ENST00000552127 SLC24A4Q8NFF2 622 aa11.43□□□□□ -0.58
BRF1-220ENST00000552127 CACFD1Q9UGQ2 172 aa11.43□□□□□ -0.58
BRF1-220ENST00000552127 PUS1Q9Y606 427 aaKnown RBP eCLIP11.43□□□□□ -0.58
BRF1-220ENST00000552127 IGHV3OR16-13A0A075B7E8 117 aa11.42□□□□□ -0.58
BRF1-220ENST00000552127 IGHV3-74A0A0B4J1X5 117 aa11.42□□□□□ -0.58
BRF1-220ENST00000552127 A0A0B4J2A0 478 aa11.42□□□□□ -0.58
BRF1-220ENST00000552127 RPS10-NUDT3A0A1W2PQS6 291 aa11.42□□□□□ -0.58
BRF1-220ENST00000552127 NUPR2A6NF83 97 aa11.42□□□□□ -0.58
BRF1-220ENST00000552127 ZNF701M0R085 212 aaPredicted RBP11.42□□□□□ -0.58
BRF1-220ENST00000552127 CLN5O75503 358 aa11.42□□□□□ -0.58
BRF1-220ENST00000552127 SCGB2A1O75556 95 aa11.42□□□□□ -0.58
BRF1-220ENST00000552127 NXPH3O95157 252 aa11.42□□□□□ -0.58
BRF1-220ENST00000552127 ANXA3P12429 323 aa11.42□□□□□ -0.58
BRF1-220ENST00000552127 BMI1P35226 326 aa11.42□□□□□ -0.58
BRF1-220ENST00000552127 SRPXP78539 464 aa11.42□□□□□ -0.58
BRF1-220ENST00000552127 C2orf83Q53S99 150 aa11.42□□□□□ -0.58
BRF1-220ENST00000552127 NMSQ5H8A3 153 aa11.42□□□□□ -0.58
BRF1-220ENST00000552127 CCDC190Q86UF4 302 aa11.42□□□□□ -0.58
BRF1-220ENST00000552127 OR4X1Q8NH49 305 aa11.42□□□□□ -0.58
BRF1-220ENST00000552127 SHPKQ9UHJ6 478 aa11.42□□□□□ -0.58
BRF1-220ENST00000552127 FAT2Q9NYQ8 4349 aa11.42□□□□□ -0.58
BRF1-220ENST00000552127 A0A1B0GU03 582 aa11.41□□□□□ -0.58
BRF1-220ENST00000552127 APOC4P55056 127 aa11.41□□□□□ -0.58
BRF1-220ENST00000552127 MLANAQ16655 118 aa11.41□□□□□ -0.58
BRF1-220ENST00000552127 FAM90A2PQ658T7 463 aa11.41□□□□□ -0.58
BRF1-220ENST00000552127 LGI3Q8N145 548 aa11.41□□□□□ -0.58
BRF1-220ENST00000552127 DEDD2Q8WXF8 326 aa11.41□□□□□ -0.58
BRF1-220ENST00000552127 ST8SIA2Q92186 375 aa11.41□□□□□ -0.58
BRF1-220ENST00000552127 VSIRQ9H7M9 311 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms