RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 ENY2Q9NPA8 101 aa12.01□□□□□ -0.49
DDX55-209ENST00000542286 RNF114Q9Y508 228 aa12.01□□□□□ -0.49
DDX55-209ENST00000542286 NKX6-3A6NJ46 265 aa12□□□□□ -0.49
DDX55-209ENST00000542286 EFNB3Q15768 340 aa12□□□□□ -0.49
DDX55-209ENST00000542286 OR4B1Q8NGF8 309 aa12□□□□□ -0.49
DDX55-209ENST00000542286 OR4P4Q8NGL7 312 aa12□□□□□ -0.49
DDX55-209ENST00000542286 OR9G1Q8NH87 305 aa12□□□□□ -0.49
DDX55-209ENST00000542286 FBXL7Q9UJT9 491 aa12□□□□□ -0.49
DDX55-209ENST00000542286 SLC45A2Q9UMX9 530 aa12□□□□□ -0.49
DDX55-209ENST00000542286 CELSR1Q9NYQ6 3014 aa12□□□□□ -0.49
DDX55-209ENST00000542286 TEX50A0A1B0GTY4 177 aa12□□□□□ -0.49
DDX55-209ENST00000542286 ITGB1BP1O14713 200 aa12□□□□□ -0.49
DDX55-209ENST00000542286 REG1AP05451 166 aa12□□□□□ -0.49
DDX55-209ENST00000542286 LINC01560Q8TB33 94 aa12□□□□□ -0.49
DDX55-209ENST00000542286 MRPL18Q9H0U6 180 aaKnown RBP12□□□□□ -0.49
DDX55-209ENST00000542286 TPSG1Q9NRR2 321 aa12□□□□□ -0.49
DDX55-209ENST00000542286 LSM4Q9Y4Z0 139 aaKnown RBP12□□□□□ -0.49
DDX55-209ENST00000542286 MDFIC2A0A1B0GVS7 189 aa11.99□□□□□ -0.49
DDX55-209ENST00000542286 DIRC3C9JPN6 131 aa11.99□□□□□ -0.49
DDX55-209ENST00000542286 PDE6DO43924 150 aa11.99□□□□□ -0.49
DDX55-209ENST00000542286 OPRK1P41145 380 aa11.99□□□□□ -0.49
DDX55-209ENST00000542286 SUMO1P63165 101 aaKnown RBP11.99□□□□□ -0.49
DDX55-209ENST00000542286 SPATA45Q537H7 98 aa11.99□□□□□ -0.49
DDX55-209ENST00000542286 OR52E5Q8NH55 327 aa11.99□□□□□ -0.49
DDX55-209ENST00000542286 ORAOV1Q8WV07 137 aa11.99□□□□□ -0.49
DDX55-209ENST00000542286 NPVFQ9HCQ7 196 aa11.99□□□□□ -0.49
DDX55-209ENST00000542286 FOXA2Q9Y261 457 aaPredicted RBP11.99□□□□□ -0.49
DDX55-209ENST00000542286 hADV38S2A0JD32 116 aa11.99□□□□□ -0.49
DDX55-209ENST00000542286 E7EQL1 145 aa11.99□□□□□ -0.49
DDX55-209ENST00000542286 LY6HO94772 140 aa11.99□□□□□ -0.49
DDX55-209ENST00000542286 OR10J4P0C629 311 aa11.99□□□□□ -0.49
DDX55-209ENST00000542286 ZNF90Q03938 601 aa11.99□□□□□ -0.49
DDX55-209ENST00000542286 TBR1Q16650 682 aa11.99□□□□□ -0.49
DDX55-209ENST00000542286 TEX36Q5VZQ5 186 aa11.99□□□□□ -0.49
DDX55-209ENST00000542286 TEPPQ6URK8 271 aa11.99□□□□□ -0.49
DDX55-209ENST00000542286 SIGLECL1Q8N7X8 197 aa11.99□□□□□ -0.49
DDX55-209ENST00000542286 NUP37Q8NFH4 326 aa11.99□□□□□ -0.49
DDX55-209ENST00000542286 OR2T6Q8NHC8 308 aa11.99□□□□□ -0.49
DDX55-209ENST00000542286 HARBI1Q96MB7 349 aa11.99□□□□□ -0.49
DDX55-209ENST00000542286 TXN2Q99757 166 aa11.99□□□□□ -0.49
DDX55-209ENST00000542286 PLEKHA3Q9HB20 300 aa11.99□□□□□ -0.49
DDX55-209ENST00000542286 LAMTOR2Q9Y2Q5 125 aa11.99□□□□□ -0.49
DDX55-209ENST00000542286 PPIAL4EA0A075B759 164 aa11.98□□□□□ -0.49
DDX55-209ENST00000542286 PPIAL4DF5H284 164 aa11.98□□□□□ -0.49
DDX55-209ENST00000542286 F6UZH7 168 aa11.98□□□□□ -0.49
DDX55-209ENST00000542286 PPIAL4FP0DN26 164 aa11.98□□□□□ -0.49
DDX55-209ENST00000542286 CTRLP40313 264 aa11.98□□□□□ -0.49
DDX55-209ENST00000542286 Q6ZN92 141 aa11.98□□□□□ -0.49
DDX55-209ENST00000542286 Q6ZVH6 145 aa11.98□□□□□ -0.49
DDX55-209ENST00000542286 OR1L6Q8NGR2 347 aa11.98□□□□□ -0.49
DDX55-209ENST00000542286 RNF2Q99496 336 aa11.98□□□□□ -0.49
DDX55-209ENST00000542286 UQCR10Q9UDW1 63 aa11.98□□□□□ -0.49
DDX55-209ENST00000542286 TMEM178BH3BS89 294 aa11.98□□□□□ -0.49
DDX55-209ENST00000542286 UPK2O00526 184 aa11.98□□□□□ -0.49
DDX55-209ENST00000542286 STAG3L2P0CL84 134 aa11.98□□□□□ -0.49
DDX55-209ENST00000542286 STAG3L3P0CL85 134 aa11.98□□□□□ -0.49
DDX55-209ENST00000542286 TNFRSF1AP19438 455 aa11.98□□□□□ -0.49
DDX55-209ENST00000542286 NBL1P41271 181 aa11.98□□□□□ -0.49
DDX55-209ENST00000542286 CDKN1BP46527 198 aa11.98□□□□□ -0.49
DDX55-209ENST00000542286 RUSC1-AS1Q66K80 236 aa11.98□□□□□ -0.49
DDX55-209ENST00000542286 Q8N976 141 aa11.98□□□□□ -0.49
DDX55-209ENST00000542286 ZNF714Q96N38 554 aa11.98□□□□□ -0.49
DDX55-209ENST00000542286 TRGV8A0A0C4DH27 118 aa11.97□□□□□ -0.49
DDX55-209ENST00000542286 MORN5Q5VZ52 161 aa11.97□□□□□ -0.49
DDX55-209ENST00000542286 ETFRF1Q6IPR1 90 aa11.97□□□□□ -0.49
DDX55-209ENST00000542286 DYNLRB1Q9NP97 96 aa11.97□□□□□ -0.49
DDX55-209ENST00000542286 IGHV3-21A0A0B4J1V1 117 aa11.97□□□□□ -0.49
DDX55-209ENST00000542286 FCN1O00602 326 aa11.97□□□□□ -0.49
DDX55-209ENST00000542286 HYPMO75409 117 aa11.97□□□□□ -0.49
DDX55-209ENST00000542286 FRMD6-AS1P0C7T7 363 aa11.97□□□□□ -0.49
DDX55-209ENST00000542286 KIR2DS2P43631 304 aa11.97□□□□□ -0.49
DDX55-209ENST00000542286 CDSNQ15517 529 aa11.97□□□□□ -0.49
DDX55-209ENST00000542286 OR10G8Q8NGN5 311 aa11.97□□□□□ -0.49
DDX55-209ENST00000542286 OR10X1Q8NGY0 326 aa11.97□□□□□ -0.49
DDX55-209ENST00000542286 ZNF586Q9NXT0 402 aa11.97□□□□□ -0.49
DDX55-209ENST00000542286 LINC00312Q9Y6C7 94 aa11.97□□□□□ -0.49
DDX55-209ENST00000542286 TRAV34A0A0B4J273 112 aa11.96□□□□□ -0.49
DDX55-209ENST00000542286 FAM90A27PA6NNH2 459 aa11.96□□□□□ -0.49
DDX55-209ENST00000542286 FAM90A9PA6NNJ1 464 aa11.96□□□□□ -0.49
DDX55-209ENST00000542286 GPX1P07203 203 aa11.96□□□□□ -0.49
DDX55-209ENST00000542286 IGLC2P0DOY2 106 aa11.96□□□□□ -0.49
DDX55-209ENST00000542286 IGLC3P0DOY3 106 aa11.96□□□□□ -0.49
DDX55-209ENST00000542286 HNRNPA3P51991 378 aaKnown RBP11.96□□□□□ -0.49
DDX55-209ENST00000542286 UBE2V1Q13404 147 aa11.96□□□□□ -0.49
DDX55-209ENST00000542286 RNASE6Q93091 150 aaKnown RBP11.96□□□□□ -0.49
DDX55-209ENST00000542286 TRAV5A0A0B4J249 113 aa11.96□□□□□ -0.49
DDX55-209ENST00000542286 SHISA9B4DS77 424 aa11.96□□□□□ -0.49
DDX55-209ENST00000542286 SLC17A3O00476 420 aa11.96□□□□□ -0.49
DDX55-209ENST00000542286 LINC00869P0C866 280 aa11.96□□□□□ -0.49
DDX55-209ENST00000542286 GCHFRP30047 84 aa11.96□□□□□ -0.49
DDX55-209ENST00000542286 RTL8BQ17RB0 113 aa11.96□□□□□ -0.49
DDX55-209ENST00000542286 HLA-DRB5Q30154 266 aa11.96□□□□□ -0.49
DDX55-209ENST00000542286 ITPR1Q14643 2758 aa11.96□□□□□ -0.5
DDX55-209ENST00000542286 H0YJW9 148 aa11.96□□□□□ -0.5
DDX55-209ENST00000542286 IER3P46695 156 aa11.96□□□□□ -0.5
DDX55-209ENST00000542286 TMPRSS3P57727 454 aa11.96□□□□□ -0.5
DDX55-209ENST00000542286 Q0VG73 95 aa11.96□□□□□ -0.5
DDX55-209ENST00000542286 C3orf36Q3SXR2 165 aa11.96□□□□□ -0.5
DDX55-209ENST00000542286 OCC1Q8TAD7 63 aa11.96□□□□□ -0.5
DDX55-209ENST00000542286 KCNIP2Q9NS61 270 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms