RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 OR8A1Q8NGG7 326 aa13.28□□□□□ -0.28
VARS2-212ENST00000542001 MGST2Q99735 147 aa13.28□□□□□ -0.28
VARS2-212ENST00000542001 CHRDL1Q9BU40 450 aa13.28□□□□□ -0.28
VARS2-212ENST00000542001 MMP23AO75900 390 aa13.28□□□□□ -0.28
VARS2-212ENST00000542001 C5orf17Q8NAS9 161 aa13.28□□□□□ -0.28
VARS2-212ENST00000542001 RBM14Q96PK6 669 aaKnown RBP13.28□□□□□ -0.28
VARS2-212ENST00000542001 UFC1Q9Y3C8 167 aa13.28□□□□□ -0.28
VARS2-212ENST00000542001 C15orf61A6NNL5 157 aa13.27□□□□□ -0.28
VARS2-212ENST00000542001 SERF1AO75920 110 aa13.27□□□□□ -0.28
VARS2-212ENST00000542001 S100A4P26447 101 aaKnown RBP13.27□□□□□ -0.28
VARS2-212ENST00000542001 HIST3H2BBQ8N257 126 aa13.27□□□□□ -0.28
VARS2-212ENST00000542001 C1orf162Q8NEQ5 155 aaPredicted RBP13.27□□□□□ -0.28
VARS2-212ENST00000542001 ZFYVE26Q68DK2 2539 aa13.27□□□□□ -0.28
VARS2-212ENST00000542001 USP9XQ93008 2570 aaPredicted RBP13.27□□□□□ -0.29
VARS2-212ENST00000542001 HINT1P49773 126 aaPredicted RBP13.27□□□□□ -0.29
VARS2-212ENST00000542001 KLF17Q5JT82 389 aaPredicted RBP13.27□□□□□ -0.29
VARS2-212ENST00000542001 ERASQ7Z444 233 aa13.27□□□□□ -0.29
VARS2-212ENST00000542001 PLSCR4Q9NRQ2 329 aa13.27□□□□□ -0.29
VARS2-212ENST00000542001 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.27□□□□□ -0.29
VARS2-212ENST00000542001 HIST1H1EP10412 219 aaKnown RBP13.27□□□□□ -0.29
VARS2-212ENST00000542001 ADMP35318 185 aa13.27□□□□□ -0.29
VARS2-212ENST00000542001 CDPF1Q6NVV7 123 aa13.27□□□□□ -0.29
VARS2-212ENST00000542001 C19orf35Q6ZS72 473 aa13.27□□□□□ -0.29
VARS2-212ENST00000542001 IGFBPL1Q8WX77 278 aa13.27□□□□□ -0.29
VARS2-212ENST00000542001 NDFIP1Q9BT67 221 aa13.27□□□□□ -0.29
VARS2-212ENST00000542001 K7EM74 188 aa13.26□□□□□ -0.29
VARS2-212ENST00000542001 SRSF12Q8WXF0 261 aaKnown RBP13.26□□□□□ -0.29
VARS2-212ENST00000542001 SLC25A33Q9BSK2 321 aa13.26□□□□□ -0.29
VARS2-212ENST00000542001 CEACAM3P40198 252 aa13.26□□□□□ -0.29
VARS2-212ENST00000542001 ZNF134P52741 427 aa13.26□□□□□ -0.29
VARS2-212ENST00000542001 CRIP3Q6Q6R5 217 aa13.26□□□□□ -0.29
VARS2-212ENST00000542001 LYPD2Q6UXB3 125 aa13.26□□□□□ -0.29
VARS2-212ENST00000542001 REC114Q7Z4M0 266 aa13.26□□□□□ -0.29
VARS2-212ENST00000542001 KLHDC1Q8N7A1 406 aa13.26□□□□□ -0.29
VARS2-212ENST00000542001 C14orf144Q96I85 54 aa13.26□□□□□ -0.29
VARS2-212ENST00000542001 PMCHL2Q9BQD1 86 aa13.26□□□□□ -0.29
VARS2-212ENST00000542001 AMBPP02760 352 aa13.26□□□□□ -0.29
VARS2-212ENST00000542001 IL4P05112 153 aa13.26□□□□□ -0.29
VARS2-212ENST00000542001 NBEAP1P0C6P0 100 aa13.26□□□□□ -0.29
VARS2-212ENST00000542001 FAM57AQ8TBR7 257 aa13.26□□□□□ -0.29
VARS2-212ENST00000542001 MBNL3Q9NUK0 354 aaKnown RBP13.26□□□□□ -0.29
VARS2-212ENST00000542001 GPX4P36969 197 aaPredicted RBP13.25□□□□□ -0.29
VARS2-212ENST00000542001 TCF24Q7RTU0 167 aa13.25□□□□□ -0.29
VARS2-212ENST00000542001 LINC01551Q86U37 167 aa13.25□□□□□ -0.29
VARS2-212ENST00000542001 UPK2O00526 184 aa13.25□□□□□ -0.29
VARS2-212ENST00000542001 SNAI2O43623 268 aa13.25□□□□□ -0.29
VARS2-212ENST00000542001 GFRA3O60609 400 aa13.25□□□□□ -0.29
VARS2-212ENST00000542001 IGKV3-15P01624 115 aa13.25□□□□□ -0.29
VARS2-212ENST00000542001 AGMATQ9BSE5 352 aa13.25□□□□□ -0.29
VARS2-212ENST00000542001 MC5RP33032 325 aa13.25□□□□□ -0.29
VARS2-212ENST00000542001 WFDC3Q8IUB2 231 aa13.25□□□□□ -0.29
VARS2-212ENST00000542001 AMY1AP04745 511 aa13.24□□□□□ -0.29
VARS2-212ENST00000542001 HTN1P15515 57 aa13.24□□□□□ -0.29
VARS2-212ENST00000542001 FOXA2Q9Y261 457 aaPredicted RBP13.24□□□□□ -0.29
VARS2-212ENST00000542001 GOLT1BQ9Y3E0 138 aa13.24□□□□□ -0.29
VARS2-212ENST00000542001 TMEM131Q92545 1883 aa13.24□□□□□ -0.29
VARS2-212ENST00000542001 CDKN1AP38936 164 aa13.24□□□□□ -0.29
VARS2-212ENST00000542001 CHD3Q12873 2000 aaKnown RBP13.24□□□□□ -0.29
VARS2-212ENST00000542001 TEX50A0A1B0GTY4 177 aa13.24□□□□□ -0.29
VARS2-212ENST00000542001 RELBQ01201 579 aa13.24□□□□□ -0.29
VARS2-212ENST00000542001 YTHDF2Q9Y5A9 579 aaKnown RBP13.24□□□□□ -0.29
VARS2-212ENST00000542001 NAV3Q8IVL0 2385 aa13.24□□□□□ -0.29
VARS2-212ENST00000542001 PTTG1IPP53801 180 aa13.24□□□□□ -0.29
VARS2-212ENST00000542001 TMEM144Q7Z5S9 345 aa13.24□□□□□ -0.29
VARS2-212ENST00000542001 VENTXO95231 258 aa13.23□□□□□ -0.29
VARS2-212ENST00000542001 CEACAM1P13688 526 aa13.23□□□□□ -0.29
VARS2-212ENST00000542001 TEX38Q6PEX7 206 aa13.23□□□□□ -0.29
VARS2-212ENST00000542001 C1orf174Q8IYL3 243 aa13.23□□□□□ -0.29
VARS2-212ENST00000542001 ZNF114Q8NC26 417 aa13.23□□□□□ -0.29
VARS2-212ENST00000542001 ZNF596Q8TC21 504 aa13.23□□□□□ -0.29
VARS2-212ENST00000542001 THYN1Q9P016 225 aa13.23□□□□□ -0.29
VARS2-212ENST00000542001 RPUSD1Q9UJJ7 312 aaKnown RBP13.23□□□□□ -0.29
VARS2-212ENST00000542001 C19orf67A6NJJ6 358 aa13.23□□□□□ -0.29
VARS2-212ENST00000542001 SELENOTP62341 195 aa13.23□□□□□ -0.29
VARS2-212ENST00000542001 CTAG1AP78358 180 aa13.23□□□□□ -0.29
VARS2-212ENST00000542001 GBGT1Q8N5D6 347 aa13.23□□□□□ -0.29
VARS2-212ENST00000542001 OR5R1Q8NH85 324 aa13.23□□□□□ -0.29
VARS2-212ENST00000542001 CLEC7AQ9BXN2 247 aa13.23□□□□□ -0.29
VARS2-212ENST00000542001 RNF24Q9Y225 148 aa13.23□□□□□ -0.29
VARS2-212ENST00000542001 TBL2Q9Y4P3 447 aaKnown RBP13.23□□□□□ -0.29
VARS2-212ENST00000542001 LCN2P80188 198 aa13.22□□□□□ -0.29
VARS2-212ENST00000542001 SPATA45Q537H7 98 aa13.22□□□□□ -0.29
VARS2-212ENST00000542001 ASCL5Q7RTU5 278 aa13.22□□□□□ -0.29
VARS2-212ENST00000542001 TMEM186Q96B77 213 aa13.22□□□□□ -0.29
VARS2-212ENST00000542001 DPRXA6NFQ7 191 aa13.22□□□□□ -0.29
VARS2-212ENST00000542001 A8MWL6 223 aa13.22□□□□□ -0.29
VARS2-212ENST00000542001 F2RL2O00254 374 aa13.22□□□□□ -0.29
VARS2-212ENST00000542001 GZMBP10144 247 aa13.22□□□□□ -0.29
VARS2-212ENST00000542001 MAS1LP35410 378 aa13.22□□□□□ -0.29
VARS2-212ENST00000542001 OSR1Q8TAX0 266 aaPredicted RBP13.22□□□□□ -0.29
VARS2-212ENST00000542001 IL36BQ9NZH7 164 aa13.22□□□□□ -0.29
VARS2-212ENST00000542001 Q6ZS49 121 aa13.22□□□□□ -0.29
VARS2-212ENST00000542001 TRAV8-1A0A0A6YYK1 113 aa13.21□□□□□ -0.29
VARS2-212ENST00000542001 TMEM200BQ69YZ2 307 aa13.21□□□□□ -0.29
VARS2-212ENST00000542001 RNASE6Q93091 150 aaKnown RBP13.21□□□□□ -0.29
VARS2-212ENST00000542001 LINC00527Q9UJ94 153 aa13.21□□□□□ -0.29
VARS2-212ENST00000542001 LINC00312Q9Y6C7 94 aa13.21□□□□□ -0.29
VARS2-212ENST00000542001 MUC22E2RYF6 1773 aaPredicted RBP13.21□□□□□ -0.29
VARS2-212ENST00000542001 TRBV6-6A0A0A6YYG2 114 aa13.21□□□□□ -0.29
VARS2-212ENST00000542001 GCGP01275 180 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms