RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 IGHV3-23P01764 117 aa14.39□□□□□ -0.11
VPS33A-205ENST00000541169 IFNA4P05014 189 aa14.39□□□□□ -0.11
VPS33A-205ENST00000541169 IGLL1P15814 213 aa14.39□□□□□ -0.11
VPS33A-205ENST00000541169 GPX4P36969 197 aaPredicted RBP14.39□□□□□ -0.11
VPS33A-205ENST00000541169 SYNJ2BPP57105 145 aa14.39□□□□□ -0.11
VPS33A-205ENST00000541169 KPRPQ5T749 579 aaPredicted RBP14.39□□□□□ -0.11
VPS33A-205ENST00000541169 REC114Q7Z4M0 266 aa14.39□□□□□ -0.11
VPS33A-205ENST00000541169 SMIM8Q96KF7 97 aa14.39□□□□□ -0.11
VPS33A-205ENST00000541169 C7orf66A4D0T2 115 aa14.38□□□□□ -0.11
VPS33A-205ENST00000541169 OR2T8A6NH00 312 aa14.38□□□□□ -0.11
VPS33A-205ENST00000541169 PPP5D1E7EU14 171 aa14.38□□□□□ -0.11
VPS33A-205ENST00000541169 SSNA1O43805 119 aa14.38□□□□□ -0.11
VPS33A-205ENST00000541169 PVALBP20472 110 aaPredicted RBP14.38□□□□□ -0.11
VPS33A-205ENST00000541169 ELLP55199 621 aaPredicted RBP14.38□□□□□ -0.11
VPS33A-205ENST00000541169 UBAC2Q8NBM4 344 aa14.38□□□□□ -0.11
VPS33A-205ENST00000541169 TMEM116Q8NCL8 245 aa14.38□□□□□ -0.11
VPS33A-205ENST00000541169 MAGT1Q9H0U3 335 aa14.38□□□□□ -0.11
VPS33A-205ENST00000541169 STRAPQ9Y3F4 350 aaKnown RBP14.38□□□□□ -0.11
VPS33A-205ENST00000541169 S4R3C0 116 aa14.38□□□□□ -0.11
VPS33A-205ENST00000541169 NDUFA4O00483 81 aa14.37□□□□□ -0.11
VPS33A-205ENST00000541169 TSC22D2O75157 780 aa14.37□□□□□ -0.11
VPS33A-205ENST00000541169 CLN5O75503 358 aa14.37□□□□□ -0.11
VPS33A-205ENST00000541169 OR2C1O95371 312 aa14.37□□□□□ -0.11
VPS33A-205ENST00000541169 CTSGP08311 255 aa14.37□□□□□ -0.11
VPS33A-205ENST00000541169 ZNF436Q9C0F3 470 aaPredicted RBP14.37□□□□□ -0.11
VPS33A-205ENST00000541169 UFC1Q9Y3C8 167 aa14.37□□□□□ -0.11
VPS33A-205ENST00000541169 A8MWP6 167 aa14.36□□□□□ -0.11
VPS33A-205ENST00000541169 F8W735 103 aaPredicted RBP14.36□□□□□ -0.11
VPS33A-205ENST00000541169 CCSO14618 274 aa14.36□□□□□ -0.11
VPS33A-205ENST00000541169 SCGB1D2O95969 90 aa14.36□□□□□ -0.11
VPS33A-205ENST00000541169 IAPPP10997 89 aa14.36□□□□□ -0.11
VPS33A-205ENST00000541169 POLR2GP62487 172 aaKnown RBP eCLIP14.36□□□□□ -0.11
VPS33A-205ENST00000541169 CD69Q07108 199 aa14.36□□□□□ -0.11
VPS33A-205ENST00000541169 OXLD1Q5BKU9 147 aa14.36□□□□□ -0.11
VPS33A-205ENST00000541169 MARC2Q969Z3 335 aa14.36□□□□□ -0.11
VPS33A-205ENST00000541169 NMES1Q9C002 83 aa14.36□□□□□ -0.11
VPS33A-205ENST00000541169 FNDC4Q9H6D8 234 aaPredicted RBP14.36□□□□□ -0.11
VPS33A-205ENST00000541169 PSENENQ9NZ42 101 aa14.36□□□□□ -0.11
VPS33A-205ENST00000541169 IGHV3-21A0A0B4J1V1 117 aa14.35□□□□□ -0.11
VPS33A-205ENST00000541169 L7N2F9 121 aa14.35□□□□□ -0.11
VPS33A-205ENST00000541169 SSSCA1O60232 199 aa14.35□□□□□ -0.11
VPS33A-205ENST00000541169 SAP30O75446 220 aa14.35□□□□□ -0.11
VPS33A-205ENST00000541169 MBPP02686 304 aaPredicted RBP14.35□□□□□ -0.11
VPS33A-205ENST00000541169 SPNP16150 400 aa14.35□□□□□ -0.11
VPS33A-205ENST00000541169 VAMP2P63027 116 aa14.35□□□□□ -0.11
VPS33A-205ENST00000541169 EGFEM1PQ0D2K5 195 aa14.35□□□□□ -0.11
VPS33A-205ENST00000541169 SPANXN5Q5MJ07 72 aa14.35□□□□□ -0.11
VPS33A-205ENST00000541169 TMEM170AQ8WVE7 144 aa14.35□□□□□ -0.11
VPS33A-205ENST00000541169 TRRAPQ9Y4A5 3859 aa14.35□□□□□ -0.11
VPS33A-205ENST00000541169 ZNF320A2RRD8 509 aa14.34□□□□□ -0.11
VPS33A-205ENST00000541169 C15orf62A8K5M9 175 aa14.34□□□□□ -0.11
VPS33A-205ENST00000541169 G3V4G9 280 aa14.34□□□□□ -0.11
VPS33A-205ENST00000541169 TMEM50AO95807 157 aa14.34□□□□□ -0.11
VPS33A-205ENST00000541169 RLN2P04090 185 aa14.34□□□□□ -0.11
VPS33A-205ENST00000541169 FABP1P07148 127 aa14.34□□□□□ -0.11
VPS33A-205ENST00000541169 IL15RAQ13261 267 aa14.34□□□□□ -0.11
VPS33A-205ENST00000541169 PRSS54Q6PEW0 395 aa14.34□□□□□ -0.11
VPS33A-205ENST00000541169 SLC16A13Q7RTY0 426 aa14.34□□□□□ -0.11
VPS33A-205ENST00000541169 SLC35E1Q96K37 410 aa14.34□□□□□ -0.11
VPS33A-205ENST00000541169 DAZ1Q9NQZ3 744 aaKnown RBP14.34□□□□□ -0.11
VPS33A-205ENST00000541169 K7EMT4 169 aa14.33□□□□□ -0.12
VPS33A-205ENST00000541169 GOSR2O14653 212 aa14.33□□□□□ -0.12
VPS33A-205ENST00000541169 PET100P0DJ07 73 aa14.33□□□□□ -0.12
VPS33A-205ENST00000541169 ADMP35318 185 aa14.33□□□□□ -0.12
VPS33A-205ENST00000541169 OXA1LQ15070 435 aa14.33□□□□□ -0.12
VPS33A-205ENST00000541169 BEAN1Q3B7T3 259 aa14.33□□□□□ -0.12
VPS33A-205ENST00000541169 ZNF600Q6ZNG1 722 aa14.33□□□□□ -0.12
VPS33A-205ENST00000541169 OR1S2Q8NGQ3 325 aa14.33□□□□□ -0.12
VPS33A-205ENST00000541169 OR2K2Q8NGT1 345 aa14.33□□□□□ -0.12
VPS33A-205ENST00000541169 ASB13Q8WXK3 278 aa14.33□□□□□ -0.12
VPS33A-205ENST00000541169 TMEM190Q8WZ59 177 aa14.33□□□□□ -0.12
VPS33A-205ENST00000541169 TECRQ9NZ01 308 aaKnown RBP14.33□□□□□ -0.12
VPS33A-205ENST00000541169 PAIP2BQ9ULR5 123 aaKnown RBP14.33□□□□□ -0.12
VPS33A-205ENST00000541169 RCL1Q9Y2P8 373 aaKnown RBP14.33□□□□□ -0.12
VPS33A-205ENST00000541169 FNDC10F2Z333 226 aa14.32□□□□□ -0.12
VPS33A-205ENST00000541169 K7EPK0 472 aa14.32□□□□□ -0.12
VPS33A-205ENST00000541169 YPEL3P61236 119 aaPredicted RBP14.32□□□□□ -0.12
VPS33A-205ENST00000541169 GINS3Q9BRX5 216 aa14.32□□□□□ -0.12
VPS33A-205ENST00000541169 CHRDL1Q9BU40 450 aa14.32□□□□□ -0.12
VPS33A-205ENST00000541169 MRPL27Q9P0M9 148 aaKnown RBP14.32□□□□□ -0.12
VPS33A-205ENST00000541169 IGHV3-48P01763 117 aa14.31□□□□□ -0.12
VPS33A-205ENST00000541169 CSN3P07498 182 aa14.31□□□□□ -0.12
VPS33A-205ENST00000541169 BMI1P35226 326 aa14.31□□□□□ -0.12
VPS33A-205ENST00000541169 RND2P52198 227 aa14.31□□□□□ -0.12
VPS33A-205ENST00000541169 OR10P1Q8NGE3 313 aa14.31□□□□□ -0.12
VPS33A-205ENST00000541169 ALG5Q9Y673 324 aa14.31□□□□□ -0.12
VPS33A-205ENST00000541169 NOTCH3Q9UM47 2321 aa14.31□□□□□ -0.12
VPS33A-205ENST00000541169 C2orf70A6NJV1 201 aa14.3□□□□□ -0.12
VPS33A-205ENST00000541169 IGLV1-51P01701 117 aa14.3□□□□□ -0.12
VPS33A-205ENST00000541169 CBLN1P23435 193 aa14.3□□□□□ -0.12
VPS33A-205ENST00000541169 OR10J1P30954 320 aa14.3□□□□□ -0.12
VPS33A-205ENST00000541169 PAX9P55771 341 aa14.3□□□□□ -0.12
VPS33A-205ENST00000541169 S100A10P60903 97 aa14.3□□□□□ -0.12
VPS33A-205ENST00000541169 TMEM14EPQ6UXP3 125 aa14.3□□□□□ -0.12
VPS33A-205ENST00000541169 IL34Q6ZMJ4 242 aa14.3□□□□□ -0.12
VPS33A-205ENST00000541169 NPIPB3Q92617 1050 aa14.3□□□□□ -0.12
VPS33A-205ENST00000541169 GGACTQ9BVM4 153 aa14.3□□□□□ -0.12
VPS33A-205ENST00000541169 MED28Q9H204 178 aa14.3□□□□□ -0.12
VPS33A-205ENST00000541169 ZC4H2Q9NQZ6 224 aa14.3□□□□□ -0.12
VPS33A-205ENST00000541169 LSM5Q9Y4Y9 91 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms