RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 HSPA13P48723 471 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 TAS2R43P59537 309 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 ARPC4P59998 168 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 GABARAPL2P60520 117 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 NCS1P62166 190 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 LSM3P62310 102 aaKnown RBP1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 MXD1Q05195 221 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 MEF2CQ06413 473 aaPredicted RBP1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 LY6EQ16553 131 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 TAL2Q16559 108 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 MRGPRG-AS1Q2M3A8 158 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 TIGITQ495A1 244 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 SPIN3Q5JUX0 258 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 LINC00242Q5T6M2 205 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 MRPL55Q7Z7F7 128 aaKnown RBP1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 Q8IYB0 196 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 ABHD12Q8N2K0 398 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 Q8N402 240 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 LFNGQ8NES3 379 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 OR4K15Q8NH41 348 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 OR5B3Q8NH48 314 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 LINC01006Q8NI28 216 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 ZNF418Q8TF45 676 aaPredicted RBP1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 MAFIPQ8WZ33 124 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 TMEM158Q8WZ71 300 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 ARL11Q969Q4 196 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 TMEM230Q96A57 120 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 RPEQ96AT9 228 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 CREB3L1Q96BA8 519 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 FAM3DQ96BQ1 224 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 SLC25A38Q96DW6 304 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 MRPL48Q96GC5 212 aaKnown RBP1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 ZNF486Q96H40 463 aaPredicted RBP1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 ZNF714Q96N38 554 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 GPER1Q99527 375 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 AGMATQ9BSE5 352 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 RSG1Q9BU20 258 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 METTL9Q9H1A3 318 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 TMEM133Q9H2Q1 129 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 VCXQ9H320 206 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 ZNF696Q9H7X3 374 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 ZNF702PQ9H963 129 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 TAF9BQ9HBM6 251 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 CALYQ9NYX4 217 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 AK3Q9UIJ7 227 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 V9GY05 133 aa1.97□□□□□ -2.09
TNFRSF1A-210ENST00000537842 FAT2Q9NYQ8 4349 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 DNAH17Q9UFH2 4485 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 TRGV10A0A0A0MS01 117 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 TRBV6-6A0A0A6YYG2 114 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 A0A1B0GWB2 263 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 ZNF729A6NN14 1252 aaPredicted RBP1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 SMKR1H3BMG3 65 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 SMLR1H3BR10 107 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 H3BUX3 64 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 AIPO00170 330 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 CCRL2O00421 344 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 MFNGO00587 321 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 MRPS14O60783 128 aaKnown RBP1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 RBBP9O75884 186 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 SNAPINO95295 136 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 GCGP01275 180 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 RBP4P02753 201 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 ORM1P02763 201 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 IFNA6P05013 189 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 OR5AL1P0C617 328 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 RD3LP0DJH9 198 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 GZMHP20718 246 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 CNTFRP26992 372 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 PPP1CCP36873 323 aaKnown RBP1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 KIR2DS2P43631 304 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 VEGFCP49767 419 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 GNG10P50151 68 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 RAB7AP51149 207 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 DYNLT3P51808 116 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 SUB1P53999 127 aaKnown RBP eCLIP1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 B2MP61769 119 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 PPP3R1P63098 170 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 RPL18AQ02543 176 aaKnown RBP1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 DYNC1I2Q13409 638 aaKnown RBP1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 MADCAM1Q13477 382 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 ARFRP1Q13795 201 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 EBI3Q14213 229 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 SPCS2Q15005 226 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 HMGN3Q15651 99 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 MPV17LQ2QL34 196 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 HLA-DRB5Q30154 266 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 MORN2Q502X0 79 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 ATAD3CQ5T2N8 411 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 LCE1AQ5T7P2 110 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 SFXN4Q6P4A7 337 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 ZNF329Q86UD4 541 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 PPP1R27Q86WC6 154 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 BOD1L2Q8IYS8 172 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 LYG1Q8N1E2 194 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 LINC01561Q8N1V8 128 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 Q8N2B8 174 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 LINC00311Q8N616 119 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 TMEM86BQ8N661 226 aa1.96□□□□□ -2.1
TNFRSF1A-210ENST00000537842 DRAM1Q8N682 238 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms