RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 NHP2Q9NX24 153 aaKnown RBP0.48□□□□□ -2.33
CCDC7-208ENST00000537047 TP73-AS1Q9UF72 201 aa0.48□□□□□ -2.33
CCDC7-208ENST00000537047 GUCA1BQ9UMX6 200 aa0.48□□□□□ -2.33
CCDC7-208ENST00000537047 ERGIC3Q9Y282 383 aa0.48□□□□□ -2.33
CCDC7-208ENST00000537047 COL4A5P29400 1685 aa0.48□□□□□ -2.33
CCDC7-208ENST00000537047 CCDC88AQ3V6T2 1871 aa0.48□□□□□ -2.33
CCDC7-208ENST00000537047 TNRC6BQ9UPQ9 1833 aaKnown RBP0.48□□□□□ -2.33
CCDC7-208ENST00000537047 KMT2DO14686 5537 aa0.47□□□□□ -2.33
CCDC7-208ENST00000537047 NUP155O75694 1391 aa0.47□□□□□ -2.33
CCDC7-208ENST00000537047 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.47□□□□□ -2.33
CCDC7-208ENST00000537047 EXOC1LA0A1B0GW35 172 aa0.47□□□□□ -2.33
CCDC7-208ENST00000537047 PQLC2LA1A4F0 135 aa0.47□□□□□ -2.33
CCDC7-208ENST00000537047 FAAHO00519 579 aa0.47□□□□□ -2.33
CCDC7-208ENST00000537047 NKX2-5P52952 324 aaPredicted RBP0.47□□□□□ -2.33
CCDC7-208ENST00000537047 ACOT6Q3I5F7 207 aaPredicted RBP0.47□□□□□ -2.33
CCDC7-208ENST00000537047 GDF5OSQ5U4N7 250 aa0.47□□□□□ -2.33
CCDC7-208ENST00000537047 SPOPLQ6IQ16 392 aa0.47□□□□□ -2.33
CCDC7-208ENST00000537047 C8orf74Q6P047 294 aa0.47□□□□□ -2.33
CCDC7-208ENST00000537047 SFT2D1Q8WV19 159 aa0.47□□□□□ -2.33
CCDC7-208ENST00000537047 C4orf3Q8WVX3 66 aa0.47□□□□□ -2.33
CCDC7-208ENST00000537047 DCUN1D1Q96GG9 259 aa0.47□□□□□ -2.33
CCDC7-208ENST00000537047 PPP1R2P1Q96PQ5 205 aa0.47□□□□□ -2.33
CCDC7-208ENST00000537047 C11orf68Q9H3H3 251 aaKnown RBP0.47□□□□□ -2.33
CCDC7-208ENST00000537047 VPS29Q9UBQ0 182 aa0.47□□□□□ -2.33
CCDC7-208ENST00000537047 TRAV1-1A0A0B4J248 108 aa0.46□□□□□ -2.34
CCDC7-208ENST00000537047 SMIM23A6NLE4 172 aa0.46□□□□□ -2.34
CCDC7-208ENST00000537047 INE1O15225 51 aa0.46□□□□□ -2.34
CCDC7-208ENST00000537047 PROSCO94903 275 aa0.46□□□□□ -2.34
CCDC7-208ENST00000537047 CRYZL1O95825 349 aa0.46□□□□□ -2.34
CCDC7-208ENST00000537047 S100A4P26447 101 aaKnown RBP0.46□□□□□ -2.34
CCDC7-208ENST00000537047 SSR2P43308 183 aa0.46□□□□□ -2.34
CCDC7-208ENST00000537047 RPL5P46777 297 aaKnown RBP0.46□□□□□ -2.34
CCDC7-208ENST00000537047 TRAPPC6BQ86SZ2 158 aa0.46□□□□□ -2.34
CCDC7-208ENST00000537047 DDI1Q8WTU0 396 aa0.46□□□□□ -2.34
CCDC7-208ENST00000537047 TSPAN32Q96QS1 320 aa0.46□□□□□ -2.34
CCDC7-208ENST00000537047 RASL12Q9NYN1 266 aa0.46□□□□□ -2.34
CCDC7-208ENST00000537047 MRPL27Q9P0M9 148 aaKnown RBP0.46□□□□□ -2.34
CCDC7-208ENST00000537047 HS3ST2Q9Y278 367 aa0.46□□□□□ -2.34
CCDC7-208ENST00000537047 MACF1Q9UPN3 7388 aaKnown RBP0.46□□□□□ -2.34
CCDC7-208ENST00000537047 ADGRB2O60241 1585 aa0.45□□□□□ -2.34
CCDC7-208ENST00000537047 TRBV6-8A0A0A6YYG3 113 aa0.45□□□□□ -2.34
CCDC7-208ENST00000537047 TGIF2-C20orf24A0A0A6YYL0 155 aa0.45□□□□□ -2.34
CCDC7-208ENST00000537047 TRAV12-1A0A0B4J245 112 aa0.45□□□□□ -2.34
CCDC7-208ENST00000537047 OR4C46A6NHA9 309 aa0.45□□□□□ -2.34
CCDC7-208ENST00000537047 BUB1B-PAK6H3BSN5 160 aa0.45□□□□□ -2.34
CCDC7-208ENST00000537047 SULT1B1O43704 296 aa0.45□□□□□ -2.34
CCDC7-208ENST00000537047 AHSA1O95433 338 aa0.45□□□□□ -2.34
CCDC7-208ENST00000537047 IFNA16P05015 189 aa0.45□□□□□ -2.34
CCDC7-208ENST00000537047 SMIM10L2AP0DMW4 78 aa0.45□□□□□ -2.34
CCDC7-208ENST00000537047 SMIM10L2BP0DMW5 78 aa0.45□□□□□ -2.34
CCDC7-208ENST00000537047 CDC42P60953 191 aa0.45□□□□□ -2.34
CCDC7-208ENST00000537047 CNBPP62633 177 aaKnown RBP0.45□□□□□ -2.34
CCDC7-208ENST00000537047 RNASE10Q5GAN6 216 aaKnown RBP0.45□□□□□ -2.34
CCDC7-208ENST00000537047 OR13D1Q8NGV5 346 aa0.45□□□□□ -2.34
CCDC7-208ENST00000537047 DCSTAMPQ9H295 470 aa0.45□□□□□ -2.34
CCDC7-208ENST00000537047 OSTCQ9NRP0 149 aa0.45□□□□□ -2.34
CCDC7-208ENST00000537047 PKIGQ9Y2B9 76 aa0.45□□□□□ -2.34
CCDC7-208ENST00000537047 SLC35A3Q9Y2D2 325 aa0.45□□□□□ -2.34
CCDC7-208ENST00000537047 SNAPC4Q5SXM2 1469 aa0.45□□□□□ -2.34
CCDC7-208ENST00000537047 MTUS2Q5JR59 1369 aa0.45□□□□□ -2.34
CCDC7-208ENST00000537047 MDN1Q9NU22 5596 aa0.44□□□□□ -2.34
CCDC7-208ENST00000537047 TRAV26-2A0A0B4J265 109 aa0.44□□□□□ -2.34
CCDC7-208ENST00000537047 C7orf71A4D174 169 aa0.44□□□□□ -2.34
CCDC7-208ENST00000537047 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
CCDC7-208ENST00000537047 PIRO00625 290 aa0.44□□□□□ -2.34
CCDC7-208ENST00000537047 CHP2O43745 196 aa0.44□□□□□ -2.34
CCDC7-208ENST00000537047 LYZL6O75951 148 aa0.44□□□□□ -2.34
CCDC7-208ENST00000537047 TTRP02766 147 aa0.44□□□□□ -2.34
CCDC7-208ENST00000537047 SERPINA6P08185 405 aa0.44□□□□□ -2.34
CCDC7-208ENST00000537047 RBP1P09455 135 aa0.44□□□□□ -2.34
CCDC7-208ENST00000537047 MGST1P10620 155 aaKnown RBP0.44□□□□□ -2.34
CCDC7-208ENST00000537047 RPS20P60866 119 aaKnown RBP0.44□□□□□ -2.34
CCDC7-208ENST00000537047 YPEL3P61236 119 aaPredicted RBP0.44□□□□□ -2.34
CCDC7-208ENST00000537047 IMPG1Q17R60 797 aa0.44□□□□□ -2.34
CCDC7-208ENST00000537047 C1orf137Q5JT78 98 aa0.44□□□□□ -2.34
CCDC7-208ENST00000537047 KRTAP19-3Q7Z4W3 81 aa0.44□□□□□ -2.34
CCDC7-208ENST00000537047 OR10J5Q8NHC4 309 aa0.44□□□□□ -2.34
CCDC7-208ENST00000537047 GPR146Q96CH1 333 aa0.44□□□□□ -2.34
CCDC7-208ENST00000537047 CCDC90BQ9GZT6 254 aa0.44□□□□□ -2.34
CCDC7-208ENST00000537047 EPDR1Q9UM22 224 aa0.44□□□□□ -2.34
CCDC7-208ENST00000537047 WRNQ14191 1432 aaPredicted RBP eCLIP0.44□□□□□ -2.34
CCDC7-208ENST00000537047 CLDN24A6NM45 220 aa0.43□□□□□ -2.34
CCDC7-208ENST00000537047 OR2J2O76002 312 aa0.43□□□□□ -2.34
CCDC7-208ENST00000537047 OR4E1P0C645 316 aa0.43□□□□□ -2.34
CCDC7-208ENST00000537047 MPV17LQ2QL34 196 aa0.43□□□□□ -2.34
CCDC7-208ENST00000537047 LINC01554Q52M75 96 aa0.43□□□□□ -2.34
CCDC7-208ENST00000537047 OR6V1Q8N148 313 aa0.43□□□□□ -2.34
CCDC7-208ENST00000537047 KRT222Q8N1A0 295 aa0.43□□□□□ -2.34
CCDC7-208ENST00000537047 CLDN22Q8N7P3 220 aa0.43□□□□□ -2.34
CCDC7-208ENST00000537047 C3orf56Q8N813 242 aa0.43□□□□□ -2.34
CCDC7-208ENST00000537047 TEX47Q8TBZ9 253 aa0.43□□□□□ -2.34
CCDC7-208ENST00000537047 BORCS7Q96B45 105 aa0.43□□□□□ -2.34
CCDC7-208ENST00000537047 C2orf50Q96LR7 162 aa0.43□□□□□ -2.34
CCDC7-208ENST00000537047 AMELYQ99218 206 aa0.43□□□□□ -2.34
CCDC7-208ENST00000537047 CYSLTR1Q9Y271 337 aa0.43□□□□□ -2.34
CCDC7-208ENST00000537047 EML6Q6ZMW3 1958 aa0.43□□□□□ -2.34
CCDC7-208ENST00000537047 J3QRK9 145 aa0.42□□□□□ -2.34
CCDC7-208ENST00000537047 CASP1P29466 404 aa0.42□□□□□ -2.34
CCDC7-208ENST00000537047 OMPP47874 163 aa0.42□□□□□ -2.34
CCDC7-208ENST00000537047 IAH1Q2TAA2 248 aaPredicted RBP0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms