RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 IFNA17P01571 189 aa14.42□□□□□ -0.1
TNFRSF1B-204ENST00000536782 PI3P19957 117 aa14.42□□□□□ -0.1
TNFRSF1B-204ENST00000536782 SUB1P53999 127 aaKnown RBP eCLIP14.42□□□□□ -0.1
TNFRSF1B-204ENST00000536782 RPL11P62913 178 aaKnown RBP14.42□□□□□ -0.1
TNFRSF1B-204ENST00000536782 RNASE12Q5GAN4 147 aaKnown RBP14.42□□□□□ -0.1
TNFRSF1B-204ENST00000536782 RNASE10Q5GAN6 216 aaKnown RBP14.42□□□□□ -0.1
TNFRSF1B-204ENST00000536782 LGALS9CQ6DKI2 356 aa14.42□□□□□ -0.1
TNFRSF1B-204ENST00000536782 LILRB2Q8N423 598 aa14.42□□□□□ -0.1
TNFRSF1B-204ENST00000536782 ARRDC1Q8N5I2 433 aa14.42□□□□□ -0.1
TNFRSF1B-204ENST00000536782 RPP25LQ8N5L8 163 aaKnown RBP14.42□□□□□ -0.1
TNFRSF1B-204ENST00000536782 C11orf45Q8TAV5 145 aa14.42□□□□□ -0.1
TNFRSF1B-204ENST00000536782 DIRAS2Q96HU8 199 aa14.42□□□□□ -0.1
TNFRSF1B-204ENST00000536782 TP53RKQ96S44 253 aa14.42□□□□□ -0.1
TNFRSF1B-204ENST00000536782 PDCD10Q9BUL8 212 aa14.42□□□□□ -0.1
TNFRSF1B-204ENST00000536782 ZFAND3Q9H8U3 227 aa14.42□□□□□ -0.1
TNFRSF1B-204ENST00000536782 TRAV2A0A0B4J234 112 aa14.41□□□□□ -0.1
TNFRSF1B-204ENST00000536782 CORTO00230 105 aa14.41□□□□□ -0.1
TNFRSF1B-204ENST00000536782 CTDSPLO15194 276 aa14.41□□□□□ -0.1
TNFRSF1B-204ENST00000536782 TAS2R19P59542 299 aa14.41□□□□□ -0.1
TNFRSF1B-204ENST00000536782 DEFB131AP59861 70 aa14.41□□□□□ -0.1
TNFRSF1B-204ENST00000536782 NANOS2P60321 138 aaKnown RBP14.41□□□□□ -0.1
TNFRSF1B-204ENST00000536782 RBMS2Q15434 407 aaKnown RBP14.41□□□□□ -0.1
TNFRSF1B-204ENST00000536782 LHFPL1Q86WI0 220 aa14.41□□□□□ -0.1
TNFRSF1B-204ENST00000536782 TMEM229BQ8NBD8 167 aa14.41□□□□□ -0.1
TNFRSF1B-204ENST00000536782 SMIM4Q8WVI0 70 aa14.41□□□□□ -0.1
TNFRSF1B-204ENST00000536782 TMEM231Q9H6L2 316 aa14.41□□□□□ -0.1
TNFRSF1B-204ENST00000536782 C3orf85A0A1B0GTC6 90 aa14.4□□□□□ -0.1
TNFRSF1B-204ENST00000536782 A0A1B0GU03 582 aa14.4□□□□□ -0.1
TNFRSF1B-204ENST00000536782 CD74P04233 296 aa14.4□□□□□ -0.1
TNFRSF1B-204ENST00000536782 CD3DP04234 171 aa14.4□□□□□ -0.1
TNFRSF1B-204ENST00000536782 IFNA4P05014 189 aa14.4□□□□□ -0.1
TNFRSF1B-204ENST00000536782 P0C879 139 aa14.4□□□□□ -0.1
TNFRSF1B-204ENST00000536782 HOXA1P49639 335 aaPredicted RBP14.4□□□□□ -0.1
TNFRSF1B-204ENST00000536782 TMEM187Q14656 261 aa14.4□□□□□ -0.1
TNFRSF1B-204ENST00000536782 LEMD1Q68G75 181 aa14.4□□□□□ -0.1
TNFRSF1B-204ENST00000536782 PVRIGQ6DKI7 326 aa14.4□□□□□ -0.1
TNFRSF1B-204ENST00000536782 FBXL17Q9UF56 701 aa14.4□□□□□ -0.1
TNFRSF1B-204ENST00000536782 A0A1W2PS18 150 aa14.39□□□□□ -0.11
TNFRSF1B-204ENST00000536782 RNASE2P10153 161 aaKnown RBP14.39□□□□□ -0.11
TNFRSF1B-204ENST00000536782 NPPCP23582 126 aa14.39□□□□□ -0.11
TNFRSF1B-204ENST00000536782 ETV6P41212 452 aa14.39□□□□□ -0.11
TNFRSF1B-204ENST00000536782 IL18Q14116 193 aa14.39□□□□□ -0.11
TNFRSF1B-204ENST00000536782 TRIM16LQ309B1 348 aa14.39□□□□□ -0.11
TNFRSF1B-204ENST00000536782 ENY2Q9NPA8 101 aa14.39□□□□□ -0.11
TNFRSF1B-204ENST00000536782 COPZ2Q9P299 210 aa14.39□□□□□ -0.11
TNFRSF1B-204ENST00000536782 RABAC1Q9UI14 185 aa14.39□□□□□ -0.11
TNFRSF1B-204ENST00000536782 ZNF701M0R085 212 aaPredicted RBP14.38□□□□□ -0.11
TNFRSF1B-204ENST00000536782 SCGB2A1O75556 95 aa14.38□□□□□ -0.11
TNFRSF1B-204ENST00000536782 DEDDO75618 318 aa14.38□□□□□ -0.11
TNFRSF1B-204ENST00000536782 OPRK1P41145 380 aa14.38□□□□□ -0.11
TNFRSF1B-204ENST00000536782 PPP5CP53041 499 aa14.38□□□□□ -0.11
TNFRSF1B-204ENST00000536782 STHQ8IWL8 128 aa14.38□□□□□ -0.11
TNFRSF1B-204ENST00000536782 FAM24BQ8N5W8 94 aa14.38□□□□□ -0.11
TNFRSF1B-204ENST00000536782 CCDC71LQ8N9Z2 235 aa14.38□□□□□ -0.11
TNFRSF1B-204ENST00000536782 MCFD2Q8NI22 146 aa14.38□□□□□ -0.11
TNFRSF1B-204ENST00000536782 ZFAND1Q8TCF1 268 aa14.38□□□□□ -0.11
TNFRSF1B-204ENST00000536782 RRNAD1Q96FB5 475 aaKnown RBP14.38□□□□□ -0.11
TNFRSF1B-204ENST00000536782 RBM38Q9H0Z9 239 aaKnown RBP14.38□□□□□ -0.11
TNFRSF1B-204ENST00000536782 DNAH6Q9C0G6 4158 aa14.37□□□□□ -0.11
TNFRSF1B-204ENST00000536782 CCDC160A6NGH7 325 aa14.37□□□□□ -0.11
TNFRSF1B-204ENST00000536782 DEFB4AO15263 64 aa14.37□□□□□ -0.11
TNFRSF1B-204ENST00000536782 CLN5O75503 358 aa14.37□□□□□ -0.11
TNFRSF1B-204ENST00000536782 MEF2DQ14814 521 aa14.37□□□□□ -0.11
TNFRSF1B-204ENST00000536782 SP6Q3SY56 376 aa14.37□□□□□ -0.11
TNFRSF1B-204ENST00000536782 STEAP1BQ6NZ63 245 aa14.37□□□□□ -0.11
TNFRSF1B-204ENST00000536782 OR4X1Q8NH49 305 aa14.37□□□□□ -0.11
TNFRSF1B-204ENST00000536782 TERB2Q8NHR7 220 aa14.37□□□□□ -0.11
TNFRSF1B-204ENST00000536782 RNASE11Q8TAA1 199 aaKnown RBP14.37□□□□□ -0.11
TNFRSF1B-204ENST00000536782 METTL26Q96S19 204 aa14.37□□□□□ -0.11
TNFRSF1B-204ENST00000536782 FNDC4Q9H6D8 234 aaPredicted RBP14.37□□□□□ -0.11
TNFRSF1B-204ENST00000536782 RSL24D1Q9UHA3 163 aaKnown RBP14.37□□□□□ -0.11
TNFRSF1B-204ENST00000536782 B3GALNT1O75752 331 aa14.36□□□□□ -0.11
TNFRSF1B-204ENST00000536782 RAB3DO95716 219 aa14.36□□□□□ -0.11
TNFRSF1B-204ENST00000536782 C2CD4CQ8TF44 421 aa14.36□□□□□ -0.11
TNFRSF1B-204ENST00000536782 TMEM230Q96A57 120 aa14.36□□□□□ -0.11
TNFRSF1B-204ENST00000536782 SOSTQ9BQB4 213 aa14.36□□□□□ -0.11
TNFRSF1B-204ENST00000536782 MRPL36Q9P0J6 103 aaKnown RBP14.36□□□□□ -0.11
TNFRSF1B-204ENST00000536782 GSTZ1O43708 216 aaPredicted RBP14.35□□□□□ -0.11
TNFRSF1B-204ENST00000536782 UCP1P25874 307 aa14.35□□□□□ -0.11
TNFRSF1B-204ENST00000536782 CRYBB3P26998 211 aa14.35□□□□□ -0.11
TNFRSF1B-204ENST00000536782 TNFSF8P32971 234 aa14.35□□□□□ -0.11
TNFRSF1B-204ENST00000536782 MLANAQ16655 118 aa14.35□□□□□ -0.11
TNFRSF1B-204ENST00000536782 SCGB2B2Q4G0G5 96 aa14.35□□□□□ -0.11
TNFRSF1B-204ENST00000536782 STXBP6Q8NFX7 210 aa14.35□□□□□ -0.11
TNFRSF1B-204ENST00000536782 OR4D10Q8NGI6 311 aa14.35□□□□□ -0.11
TNFRSF1B-204ENST00000536782 OR13C8Q8NGS7 320 aa14.35□□□□□ -0.11
TNFRSF1B-204ENST00000536782 NARS2Q96I59 477 aaKnown RBP14.35□□□□□ -0.11
TNFRSF1B-204ENST00000536782 TRAV30A0A087WSZ9 112 aa14.34□□□□□ -0.11
TNFRSF1B-204ENST00000536782 A0A0G2JRQ6 117 aa14.34□□□□□ -0.11
TNFRSF1B-204ENST00000536782 K7EQG2 157 aa14.34□□□□□ -0.11
TNFRSF1B-204ENST00000536782 P2RY1P47900 373 aa14.34□□□□□ -0.11
TNFRSF1B-204ENST00000536782 TCTAP57738 103 aa14.34□□□□□ -0.11
TNFRSF1B-204ENST00000536782 BSXQ3C1V8 233 aa14.34□□□□□ -0.11
TNFRSF1B-204ENST00000536782 TMEM41BQ5BJD5 291 aa14.34□□□□□ -0.11
TNFRSF1B-204ENST00000536782 GRAMD2BQ96HH9 432 aa14.34□□□□□ -0.11
TNFRSF1B-204ENST00000536782 HECTD4Q9Y4D8 3996 aa14.33□□□□□ -0.12
TNFRSF1B-204ENST00000536782 FABP12A6NFH5 140 aa14.33□□□□□ -0.12
TNFRSF1B-204ENST00000536782 AKAIN1P0CW23 69 aa14.33□□□□□ -0.12
TNFRSF1B-204ENST00000536782 SPCS3P61009 180 aa14.33□□□□□ -0.12
TNFRSF1B-204ENST00000536782 MORN3Q6PF18 240 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms