RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 DEDDO75618 318 aa11.55□□□□□ -0.56
NUP54-213ENST00000513352 METTL15P1P0C7V9 234 aa11.55□□□□□ -0.56
NUP54-213ENST00000513352 ARL3P36405 182 aa11.55□□□□□ -0.56
NUP54-213ENST00000513352 MYCNOSP40205 109 aa11.55□□□□□ -0.56
NUP54-213ENST00000513352 PAX9P55771 341 aa11.55□□□□□ -0.56
NUP54-213ENST00000513352 MLANAQ16655 118 aa11.55□□□□□ -0.56
NUP54-213ENST00000513352 FAM209BQ5JX69 171 aa11.55□□□□□ -0.56
NUP54-213ENST00000513352 ETFRF1Q6IPR1 90 aa11.55□□□□□ -0.56
NUP54-213ENST00000513352 Q6ZNX1 250 aa11.55□□□□□ -0.56
NUP54-213ENST00000513352 SLC16A13Q7RTY0 426 aa11.55□□□□□ -0.56
NUP54-213ENST00000513352 FNDC4Q9H6D8 234 aaPredicted RBP11.55□□□□□ -0.56
NUP54-213ENST00000513352 RANGRFQ9HD47 186 aaPredicted RBP11.55□□□□□ -0.56
NUP54-213ENST00000513352 GNG7O60262 68 aa11.54□□□□□ -0.56
NUP54-213ENST00000513352 CLEC3BP05452 202 aa11.54□□□□□ -0.56
NUP54-213ENST00000513352 GIPP09681 153 aaPredicted RBP11.54□□□□□ -0.56
NUP54-213ENST00000513352 SLURP1P55000 103 aa11.54□□□□□ -0.56
NUP54-213ENST00000513352 RPEL1Q2QD12 228 aa11.54□□□□□ -0.56
NUP54-213ENST00000513352 PVRIGQ6DKI7 326 aa11.54□□□□□ -0.56
NUP54-213ENST00000513352 ACY3Q96HD9 319 aa11.54□□□□□ -0.56
NUP54-213ENST00000513352 SLC35E1Q96K37 410 aa11.54□□□□□ -0.56
NUP54-213ENST00000513352 OR5AC2Q9NZP5 309 aa11.54□□□□□ -0.56
NUP54-213ENST00000513352 SMCO3A2RU48 225 aa11.53□□□□□ -0.56
NUP54-213ENST00000513352 FAM24AA6NFZ4 105 aa11.53□□□□□ -0.56
NUP54-213ENST00000513352 E5RGE8 158 aa11.53□□□□□ -0.56
NUP54-213ENST00000513352 BMPR1BO00238 502 aa11.53□□□□□ -0.56
NUP54-213ENST00000513352 CCNKO75909 580 aa11.53□□□□□ -0.56
NUP54-213ENST00000513352 MPC2O95563 127 aa11.53□□□□□ -0.56
NUP54-213ENST00000513352 SLC25A4P12235 298 aa11.53□□□□□ -0.56
NUP54-213ENST00000513352 ZP3P21754 424 aa11.53□□□□□ -0.56
NUP54-213ENST00000513352 NPBWR1P48145 328 aa11.53□□□□□ -0.56
NUP54-213ENST00000513352 RND2P52198 227 aa11.53□□□□□ -0.56
NUP54-213ENST00000513352 CD69Q07108 199 aa11.53□□□□□ -0.56
NUP54-213ENST00000513352 BSCL2Q96G97 398 aaPredicted RBP11.53□□□□□ -0.56
NUP54-213ENST00000513352 GAR1Q9NY12 217 aaKnown RBP11.53□□□□□ -0.56
NUP54-213ENST00000513352 MBD2Q9UBB5 411 aa11.53□□□□□ -0.56
NUP54-213ENST00000513352 IGHV3-35A0A0C4DH35 117 aa11.52□□□□□ -0.57
NUP54-213ENST00000513352 NUPL2O15504 423 aaKnown RBP11.52□□□□□ -0.57
NUP54-213ENST00000513352 TGOLN2O43493 480 aa11.52□□□□□ -0.57
NUP54-213ENST00000513352 GGCTO75223 188 aaKnown RBP11.52□□□□□ -0.57
NUP54-213ENST00000513352 SCGB2A1O75556 95 aa11.52□□□□□ -0.57
NUP54-213ENST00000513352 CST7O76096 145 aa11.52□□□□□ -0.57
NUP54-213ENST00000513352 HOXD3P31249 432 aaPredicted RBP11.52□□□□□ -0.57
NUP54-213ENST00000513352 RAP2BP61225 183 aa11.52□□□□□ -0.57
NUP54-213ENST00000513352 OR10P1Q8NGE3 313 aa11.52□□□□□ -0.57
NUP54-213ENST00000513352 THAP6Q8TBB0 222 aa11.52□□□□□ -0.57
NUP54-213ENST00000513352 DCUN1D4Q92564 292 aa11.52□□□□□ -0.57
NUP54-213ENST00000513352 TXN2Q99757 166 aa11.52□□□□□ -0.57
NUP54-213ENST00000513352 IGSF23A1L1A6 192 aa11.51□□□□□ -0.57
NUP54-213ENST00000513352 H0YIZ8 118 aa11.51□□□□□ -0.57
NUP54-213ENST00000513352 OR2C1O95371 312 aa11.51□□□□□ -0.57
NUP54-213ENST00000513352 CD33P20138 364 aa11.51□□□□□ -0.57
NUP54-213ENST00000513352 AKR1C1Q04828 323 aa11.51□□□□□ -0.57
NUP54-213ENST00000513352 FHL3Q13643 280 aa11.51□□□□□ -0.57
NUP54-213ENST00000513352 PRSS54Q6PEW0 395 aa11.51□□□□□ -0.57
NUP54-213ENST00000513352 SPSB3Q6PJ21 355 aa11.51□□□□□ -0.57
NUP54-213ENST00000513352 TMEM14EPQ6UXP3 125 aa11.51□□□□□ -0.57
NUP54-213ENST00000513352 ACOT7LQ6ZUV0 252 aa11.51□□□□□ -0.57
NUP54-213ENST00000513352 STX12Q86Y82 276 aa11.51□□□□□ -0.57
NUP54-213ENST00000513352 TMEM217Q8N7C4 229 aa11.51□□□□□ -0.57
NUP54-213ENST00000513352 ASB13Q8WXK3 278 aa11.51□□□□□ -0.57
NUP54-213ENST00000513352 NPIPB3Q92617 1050 aa11.51□□□□□ -0.57
NUP54-213ENST00000513352 C11orf1Q9H5F2 150 aa11.51□□□□□ -0.57
NUP54-213ENST00000513352 LYRM2Q9NU23 88 aaPredicted RBP11.51□□□□□ -0.57
NUP54-213ENST00000513352 MRPL36Q9P0J6 103 aaKnown RBP11.51□□□□□ -0.57
NUP54-213ENST00000513352 F8W735 103 aaPredicted RBP11.5□□□□□ -0.57
NUP54-213ENST00000513352 CLN5O75503 358 aa11.5□□□□□ -0.57
NUP54-213ENST00000513352 GPX4P36969 197 aaPredicted RBP11.5□□□□□ -0.57
NUP54-213ENST00000513352 P2RY1P47900 373 aa11.5□□□□□ -0.57
NUP54-213ENST00000513352 SYNJ2BPP57105 145 aa11.5□□□□□ -0.57
NUP54-213ENST00000513352 FGL1Q08830 312 aa11.5□□□□□ -0.57
NUP54-213ENST00000513352 LILRB2Q8N423 598 aa11.5□□□□□ -0.57
NUP54-213ENST00000513352 TMEM252Q8N6L7 170 aa11.5□□□□□ -0.57
NUP54-213ENST00000513352 OR2T35Q8NGX2 323 aa11.5□□□□□ -0.57
NUP54-213ENST00000513352 OR4X1Q8NH49 305 aa11.5□□□□□ -0.57
NUP54-213ENST00000513352 CHAC2Q8WUX2 184 aa11.5□□□□□ -0.57
NUP54-213ENST00000513352 CACNG8Q8WXS5 425 aa11.5□□□□□ -0.57
NUP54-213ENST00000513352 DLX4Q92988 240 aaPredicted RBP11.5□□□□□ -0.57
NUP54-213ENST00000513352 ATP6V0BQ99437 205 aa11.5□□□□□ -0.57
NUP54-213ENST00000513352 CHRDL1Q9BU40 450 aa11.5□□□□□ -0.57
NUP54-213ENST00000513352 SLC25A31Q9H0C2 315 aa11.5□□□□□ -0.57
NUP54-213ENST00000513352 FXYD6-FXYD2A0A087WZ82 144 aa11.49□□□□□ -0.57
NUP54-213ENST00000513352 TRAV14DV4A0A0A6YYC5 116 aa11.49□□□□□ -0.57
NUP54-213ENST00000513352 ZNF320A2RRD8 509 aa11.49□□□□□ -0.57
NUP54-213ENST00000513352 SCAF4O95104 1147 aaKnown RBP11.49□□□□□ -0.57
NUP54-213ENST00000513352 OR10J1P30954 320 aa11.49□□□□□ -0.57
NUP54-213ENST00000513352 HBG1P69891 147 aa11.49□□□□□ -0.57
NUP54-213ENST00000513352 HBG2P69892 147 aa11.49□□□□□ -0.57
NUP54-213ENST00000513352 RELQ04864 619 aaPredicted RBP11.49□□□□□ -0.57
NUP54-213ENST00000513352 SLC38A11Q08AI6 406 aa11.49□□□□□ -0.57
NUP54-213ENST00000513352 GAMTQ14353 236 aa11.49□□□□□ -0.57
NUP54-213ENST00000513352 FAM106AQ4KMX7 169 aa11.49□□□□□ -0.57
NUP54-213ENST00000513352 LINC00482Q8N8I6 264 aa11.49□□□□□ -0.57
NUP54-213ENST00000513352 RNF126Q9BV68 326 aa11.49□□□□□ -0.57
NUP54-213ENST00000513352 TRAV30A0A087WSZ9 112 aa11.48□□□□□ -0.57
NUP54-213ENST00000513352 ZFP92A6NM28 416 aa11.48□□□□□ -0.57
NUP54-213ENST00000513352 PRSS46E5RG02 174 aa11.48□□□□□ -0.57
NUP54-213ENST00000513352 OVOL1O14753 267 aa11.48□□□□□ -0.57
NUP54-213ENST00000513352 YIF1AO95070 293 aa11.48□□□□□ -0.57
NUP54-213ENST00000513352 CTSGP08311 255 aa11.48□□□□□ -0.57
NUP54-213ENST00000513352 FCGR2BP31994 310 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms