RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 AKAP13Q12802 2813 aa14.48□□□□□ -0.09
CCHCR1-228ENST00000509552 NUPR1O60356 82 aa14.48□□□□□ -0.09
CCHCR1-228ENST00000509552 IGHV1-8P0DP01 117 aa14.48□□□□□ -0.09
CCHCR1-228ENST00000509552 MGST1P10620 155 aaKnown RBP14.48□□□□□ -0.09
CCHCR1-228ENST00000509552 LGALS7P47929 136 aa14.48□□□□□ -0.09
CCHCR1-228ENST00000509552 DLX6P56179 175 aa14.48□□□□□ -0.09
CCHCR1-228ENST00000509552 SSUH2Q9Y2M2 353 aa14.48□□□□□ -0.09
CCHCR1-228ENST00000509552 ENSAO43768 121 aaKnown RBP14.48□□□□□ -0.09
CCHCR1-228ENST00000509552 TPPP2P59282 170 aa14.48□□□□□ -0.09
CCHCR1-228ENST00000509552 PAFAH1B2P68402 229 aa14.48□□□□□ -0.09
CCHCR1-228ENST00000509552 SSBP2P81877 361 aaPredicted RBP14.48□□□□□ -0.09
CCHCR1-228ENST00000509552 WDR73Q6P4I2 378 aa14.48□□□□□ -0.09
CCHCR1-228ENST00000509552 PAXXQ9BUH6 204 aa14.48□□□□□ -0.09
CCHCR1-228ENST00000509552 ZNF355PQ9NSJ1 428 aa14.48□□□□□ -0.09
CCHCR1-228ENST00000509552 SHISA9B4DS77 424 aa14.47□□□□□ -0.09
CCHCR1-228ENST00000509552 E7EQL1 145 aa14.47□□□□□ -0.09
CCHCR1-228ENST00000509552 MT-ND6P03923 174 aa14.47□□□□□ -0.09
CCHCR1-228ENST00000509552 TAS2R60P59551 318 aa14.47□□□□□ -0.09
CCHCR1-228ENST00000509552 CX3CL1P78423 397 aa14.47□□□□□ -0.09
CCHCR1-228ENST00000509552 COX19Q49B96 90 aa14.47□□□□□ -0.09
CCHCR1-228ENST00000509552 IBA57Q5T440 356 aaKnown RBP14.47□□□□□ -0.09
CCHCR1-228ENST00000509552 MORN5Q5VZ52 161 aa14.47□□□□□ -0.09
CCHCR1-228ENST00000509552 THAP8Q8NA92 274 aa14.47□□□□□ -0.09
CCHCR1-228ENST00000509552 IGF2BP2-AS1Q96M15 143 aa14.47□□□□□ -0.09
CCHCR1-228ENST00000509552 ROS1P08922 2347 aa14.47□□□□□ -0.09
CCHCR1-228ENST00000509552 RANP62826 216 aaKnown RBP14.47□□□□□ -0.09
CCHCR1-228ENST00000509552 FXYD3Q14802 87 aa14.47□□□□□ -0.09
CCHCR1-228ENST00000509552 ETFRF1Q6IPR1 90 aa14.47□□□□□ -0.09
CCHCR1-228ENST00000509552 ANKRD11Q6UB99 2663 aaPredicted RBP14.46□□□□□ -0.09
CCHCR1-228ENST00000509552 ZFHX2Q9C0A1 2572 aaPredicted RBP14.46□□□□□ -0.09
CCHCR1-228ENST00000509552 IGHV1-69-2A0A0G2JMI3 117 aa14.46□□□□□ -0.09
CCHCR1-228ENST00000509552 RAB4BP61018 213 aa14.46□□□□□ -0.09
CCHCR1-228ENST00000509552 BAGE3Q86Y29 109 aa14.46□□□□□ -0.09
CCHCR1-228ENST00000509552 BAGE2Q86Y30 109 aa14.46□□□□□ -0.09
CCHCR1-228ENST00000509552 TMEM133Q9H2Q1 129 aa14.46□□□□□ -0.09
CCHCR1-228ENST00000509552 NAGKQ9UJ70 344 aa14.46□□□□□ -0.09
CCHCR1-228ENST00000509552 CDC42EP3Q9UKI2 254 aa14.46□□□□□ -0.09
CCHCR1-228ENST00000509552 IGLV2-8P01709 118 aa14.46□□□□□ -0.1
CCHCR1-228ENST00000509552 IGHV3-48P01763 117 aa14.46□□□□□ -0.1
CCHCR1-228ENST00000509552 RBPJQ06330 500 aa14.46□□□□□ -0.1
CCHCR1-228ENST00000509552 ST6GALNAC3Q8NDV1 305 aa14.46□□□□□ -0.1
CCHCR1-228ENST00000509552 NDUFAF3Q9BU61 184 aa14.46□□□□□ -0.1
CCHCR1-228ENST00000509552 SERTAD4Q9NUC0 356 aa14.46□□□□□ -0.1
CCHCR1-228ENST00000509552 AMMECR1Q9Y4X0 333 aaPredicted RBP14.46□□□□□ -0.1
CCHCR1-228ENST00000509552 A0A1W2PPI3 338 aa14.45□□□□□ -0.1
CCHCR1-228ENST00000509552 PYYP10082 97 aa14.45□□□□□ -0.1
CCHCR1-228ENST00000509552 ESDP10768 282 aa14.45□□□□□ -0.1
CCHCR1-228ENST00000509552 APOBEC3AP31941 199 aaPredicted RBP14.45□□□□□ -0.1
CCHCR1-228ENST00000509552 TPSG1Q9NRR2 321 aa14.45□□□□□ -0.1
CCHCR1-228ENST00000509552 NAT8BQ9UHF3 227 aa14.45□□□□□ -0.1
CCHCR1-228ENST00000509552 TP53TG3Q9ULZ0 132 aa14.45□□□□□ -0.1
CCHCR1-228ENST00000509552 IGKV1D-37A0A075B6S9 117 aa14.44□□□□□ -0.1
CCHCR1-228ENST00000509552 REG1AP05451 166 aa14.44□□□□□ -0.1
CCHCR1-228ENST00000509552 NBL1P41271 181 aa14.44□□□□□ -0.1
CCHCR1-228ENST00000509552 Q0VG73 95 aa14.44□□□□□ -0.1
CCHCR1-228ENST00000509552 PATE2Q6UY27 113 aa14.44□□□□□ -0.1
CCHCR1-228ENST00000509552 DMRTC2Q8IXT2 367 aaPredicted RBP14.44□□□□□ -0.1
CCHCR1-228ENST00000509552 TEX45Q8NA69 505 aa14.44□□□□□ -0.1
CCHCR1-228ENST00000509552 BEND2Q8NDZ0 799 aa14.44□□□□□ -0.1
CCHCR1-228ENST00000509552 SPINK4O60575 86 aa14.44□□□□□ -0.1
CCHCR1-228ENST00000509552 SERF1AO75920 110 aa14.44□□□□□ -0.1
CCHCR1-228ENST00000509552 FRMD6-AS1P0C7T7 363 aa14.44□□□□□ -0.1
CCHCR1-228ENST00000509552 C22orf15Q8WYQ4 148 aa14.44□□□□□ -0.1
CCHCR1-228ENST00000509552 TNFRSF14Q92956 283 aa14.44□□□□□ -0.1
CCHCR1-228ENST00000509552 RITA1Q96K30 269 aa14.44□□□□□ -0.1
CCHCR1-228ENST00000509552 ACACAQ13085 2346 aa14.44□□□□□ -0.1
CCHCR1-228ENST00000509552 IGHV3-72A0A0B4J1Y9 119 aa14.43□□□□□ -0.1
CCHCR1-228ENST00000509552 B9A039 149 aa14.43□□□□□ -0.1
CCHCR1-228ENST00000509552 TCL1AP56279 114 aa14.43□□□□□ -0.1
CCHCR1-228ENST00000509552 LBHQ53QV2 105 aaPredicted RBP14.43□□□□□ -0.1
CCHCR1-228ENST00000509552 SMIM27A0A1W2PRY6 76 aa14.43□□□□□ -0.1
CCHCR1-228ENST00000509552 PRRX1P54821 245 aa14.43□□□□□ -0.1
CCHCR1-228ENST00000509552 LINC00305Q7Z4B0 112 aa14.43□□□□□ -0.1
CCHCR1-228ENST00000509552 ZNF329Q86UD4 541 aa14.43□□□□□ -0.1
CCHCR1-228ENST00000509552 STXBP6Q8NFX7 210 aa14.43□□□□□ -0.1
CCHCR1-228ENST00000509552 MISP3Q96FF7 219 aa14.43□□□□□ -0.1
CCHCR1-228ENST00000509552 PCNX1Q96RV3 2341 aa14.42□□□□□ -0.1
CCHCR1-228ENST00000509552 ZNF705FA8MVS1 300 aaPredicted RBP14.42□□□□□ -0.1
CCHCR1-228ENST00000509552 CD3EP07766 207 aa14.42□□□□□ -0.1
CCHCR1-228ENST00000509552 ZNF705DP0CH99 300 aaPredicted RBP14.42□□□□□ -0.1
CCHCR1-228ENST00000509552 ZNF705BP0CI00 300 aaPredicted RBP14.42□□□□□ -0.1
CCHCR1-228ENST00000509552 RPL27AP46776 148 aaKnown RBP14.42□□□□□ -0.1
CCHCR1-228ENST00000509552 TBR1Q16650 682 aa14.42□□□□□ -0.1
CCHCR1-228ENST00000509552 PRR30Q53SZ7 412 aaPredicted RBP14.42□□□□□ -0.1
CCHCR1-228ENST00000509552 C11orf42Q8N5U0 333 aa14.42□□□□□ -0.1
CCHCR1-228ENST00000509552 PERPQ96FX8 193 aa14.42□□□□□ -0.1
CCHCR1-228ENST00000509552 TNFRSF19Q9NS68 423 aa14.42□□□□□ -0.1
CCHCR1-228ENST00000509552 MRPL36Q9P0J6 103 aaKnown RBP14.42□□□□□ -0.1
CCHCR1-228ENST00000509552 RALYQ9UKM9 306 aaKnown RBP14.42□□□□□ -0.1
CCHCR1-228ENST00000509552 PKDREJQ9NTG1 2253 aa14.42□□□□□ -0.1
CCHCR1-228ENST00000509552 IGLC7A0M8Q6 106 aa14.42□□□□□ -0.1
CCHCR1-228ENST00000509552 PEX7O00628 323 aa14.42□□□□□ -0.1
CCHCR1-228ENST00000509552 AMY1AP04745 511 aa14.42□□□□□ -0.1
CCHCR1-228ENST00000509552 SLC35B1P78383 322 aa14.42□□□□□ -0.1
CCHCR1-228ENST00000509552 TNXAQ16473 311 aa14.42□□□□□ -0.1
CCHCR1-228ENST00000509552 HCP5Q6MZN7 132 aa14.42□□□□□ -0.1
CCHCR1-228ENST00000509552 TMEM136Q6ZRR5 245 aa14.42□□□□□ -0.1
CCHCR1-228ENST00000509552 NHLRC2Q8NBF2 726 aa14.42□□□□□ -0.1
CCHCR1-228ENST00000509552 LINC00479Q96M42 142 aa14.42□□□□□ -0.1
CCHCR1-228ENST00000509552 SAMD10Q9BYL1 202 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms