RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 SAP30LQ9HAJ7 183 aa5.96□□□□□ -1.46
LIMCH1-207ENST00000508466 LIN7CQ9NUP9 197 aaKnown RBP5.96□□□□□ -1.46
LIMCH1-207ENST00000508466 TET2Q6N021 2002 aaPredicted RBP5.96□□□□□ -1.46
LIMCH1-207ENST00000508466 IGKV3D-11A0A0A0MRZ8 115 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 IGHV3-21A0A0B4J1V1 117 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 ZNF503-AS2A6NEH8 195 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 CRYGSP22914 178 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 FGF12P61328 243 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 RNPS1Q15287 305 aaKnown RBP5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 MRPL21Q7Z2W9 205 aaKnown RBP5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 CPT1CQ8TCG5 803 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 DDB2Q92466 427 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 SH2D2AQ9NP31 389 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 AKAP6Q13023 2319 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 TRBV20-1A0A075B6N2 111 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 TRAV8-1A0A0A6YYK1 113 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 KBTBD11-OT1A0A1B0GTJ5 212 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 MANSC4A6NHS7 340 aaPredicted RBP5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 CXCL13O43927 109 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 MT-ND6P03923 174 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 ALKBH6Q3KRA9 238 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 RPL39P5Q59GN2 51 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 OR9G1Q8NH87 305 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 FLYWCH2Q96CP2 140 aaKnown RBP5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 HSPB8Q9UJY1 196 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 ZNF257Q9Y2Q1 563 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 INSIG2Q9Y5U4 225 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 PKDREJQ9NTG1 2253 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 TMEM131Q92545 1883 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 TRGV10A0A0A0MS01 117 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 OR2H2O95918 312 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 APOHP02749 345 aaPredicted RBP5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 KIR2DL1P43626 348 aaPredicted RBP5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 CACNG7P62955 275 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 FOXL2NBQ6ZUU3 175 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 BOD1L2Q8IYS8 172 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 BCL6BQ8N143 479 aaPredicted RBP5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 ZNF503Q96F45 646 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 OR2H1Q9GZK4 316 aa5.95□□□□□ -1.46
LIMCH1-207ENST00000508466 A8MWL6 223 aa5.94□□□□□ -1.46
LIMCH1-207ENST00000508466 C9orf172C9J069 976 aa5.94□□□□□ -1.46
LIMCH1-207ENST00000508466 PSPNO60542 156 aa5.94□□□□□ -1.46
LIMCH1-207ENST00000508466 SPINK8P0C7L1 97 aa5.94□□□□□ -1.46
LIMCH1-207ENST00000508466 AAED1Q7RTV5 226 aa5.94□□□□□ -1.46
LIMCH1-207ENST00000508466 OR4A16Q8NH70 328 aa5.94□□□□□ -1.46
LIMCH1-207ENST00000508466 UFC1Q9Y3C8 167 aa5.94□□□□□ -1.46
LIMCH1-207ENST00000508466 PCNX1Q96RV3 2341 aa5.94□□□□□ -1.46
LIMCH1-207ENST00000508466 SMIM27A0A1W2PRY6 76 aa5.94□□□□□ -1.46
LIMCH1-207ENST00000508466 SIVA1O15304 175 aa5.94□□□□□ -1.46
LIMCH1-207ENST00000508466 CCL3P10147 92 aa5.94□□□□□ -1.46
LIMCH1-207ENST00000508466 COX8AP10176 69 aa5.94□□□□□ -1.46
LIMCH1-207ENST00000508466 EN2P19622 333 aaPredicted RBP5.94□□□□□ -1.46
LIMCH1-207ENST00000508466 SSBP2P81877 361 aaPredicted RBP5.94□□□□□ -1.46
LIMCH1-207ENST00000508466 FAM27BQ5VT28 67 aa5.94□□□□□ -1.46
LIMCH1-207ENST00000508466 OR10D3Q8NH80 312 aa5.94□□□□□ -1.46
LIMCH1-207ENST00000508466 MBD6Q96DN6 1003 aa5.94□□□□□ -1.46
LIMCH1-207ENST00000508466 FOXB1Q99853 325 aa5.94□□□□□ -1.46
LIMCH1-207ENST00000508466 DKK2Q9UBU2 259 aa5.94□□□□□ -1.46
LIMCH1-207ENST00000508466 CACNA1HO95180 2353 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 A1L4Q6 167 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 A6NDN8 102 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 C21orf140B9A014 251 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 C16orf97H3BN30 126 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 SLC25A17O43808 307 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 SYT8Q8NBV8 401 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 DEFB104AQ8WTQ1 72 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 NABP2Q9BQ15 211 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 RNF208Q9H0X6 261 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 IDI2-AS1Q9NZ38 188 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 ZNRD1Q9P1U0 126 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 IGKV1OR2-108A0A075B7D4 117 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 TRBV9A0A0B4J1U6 114 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 A0A1B0GWB2 263 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 C12orf77C9JDV5 145 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 SMKR1H3BMG3 65 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 H3BRM9 83 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 APOBEC3AP31941 199 aaPredicted RBP5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 CFHR1Q03591 330 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 CR1LQ2VPA4 569 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 ZNF441Q8N8Z8 693 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 PRSS3P2Q8NHM4 247 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 ZNF418Q8TF45 676 aaPredicted RBP5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 CACNG8Q8WXS5 425 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 CDX2Q99626 313 aaPredicted RBP5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 FGF21Q9NSA1 209 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 SPTA1P02549 2419 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 IGKV2D-26A0A0A0MRZ7 120 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 IFI27P40305 119 aaPredicted RBP5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 KIR2DL2P43627 348 aaPredicted RBP5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 VDAC2P45880 294 aaPredicted RBP5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 TMPRSS3P57727 454 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 TMEM42Q69YG0 159 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 C1orf122Q6ZSJ8 110 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 GTSF1Q8WW33 167 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 PSG8Q9UQ74 426 aa5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 AMMECR1Q9Y4X0 333 aaPredicted RBP5.93□□□□□ -1.46
LIMCH1-207ENST00000508466 SPTBN2O15020 2390 aa5.92□□□□□ -1.46
LIMCH1-207ENST00000508466 PSMB11A5LHX3 300 aa5.92□□□□□ -1.46
LIMCH1-207ENST00000508466 ANKRD30BLA7E2S9 258 aa5.92□□□□□ -1.46
LIMCH1-207ENST00000508466 CXCL10P02778 98 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms