RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 VAMP3Q15836 100 aa14.43□□□□□ -0.1
NUP54-205ENST00000507257 SPATA12Q7Z6I5 190 aa14.43□□□□□ -0.1
NUP54-205ENST00000507257 KLF12Q9Y4X4 402 aa14.43□□□□□ -0.1
NUP54-205ENST00000507257 DSCAML1Q8TD84 2053 aa14.43□□□□□ -0.1
NUP54-205ENST00000507257 DLL1O00548 723 aa14.43□□□□□ -0.1
NUP54-205ENST00000507257 CECR9P0C854 216 aa14.43□□□□□ -0.1
NUP54-205ENST00000507257 MYOD1P15172 320 aa14.43□□□□□ -0.1
NUP54-205ENST00000507257 HBBP68871 147 aa14.43□□□□□ -0.1
NUP54-205ENST00000507257 FAM122AQ96E09 287 aa14.43□□□□□ -0.1
NUP54-205ENST00000507257 PATE3B3GLJ2 98 aa14.42□□□□□ -0.1
NUP54-205ENST00000507257 C9orf172C9J069 976 aa14.42□□□□□ -0.1
NUP54-205ENST00000507257 FABP6P51161 128 aa14.42□□□□□ -0.1
NUP54-205ENST00000507257 BVES-AS1Q5T3Y7 98 aa14.42□□□□□ -0.1
NUP54-205ENST00000507257 SLC25A34Q6PIV7 304 aa14.42□□□□□ -0.1
NUP54-205ENST00000507257 PAXXQ9BUH6 204 aa14.42□□□□□ -0.1
NUP54-205ENST00000507257 MS4A6AQ9H2W1 248 aa14.42□□□□□ -0.1
NUP54-205ENST00000507257 TOX4O94842 621 aa14.41□□□□□ -0.1
NUP54-205ENST00000507257 LHBP01229 141 aa14.41□□□□□ -0.1
NUP54-205ENST00000507257 KIR3DL3Q8N743 410 aa14.41□□□□□ -0.1
NUP54-205ENST00000507257 LINC00479Q96M42 142 aa14.41□□□□□ -0.1
NUP54-205ENST00000507257 TMEM191AQ9H0A3 160 aa14.41□□□□□ -0.1
NUP54-205ENST00000507257 BPIFB3P59826 476 aa14.41□□□□□ -0.1
NUP54-205ENST00000507257 MPV17L2Q567V2 206 aa14.41□□□□□ -0.1
NUP54-205ENST00000507257 PET117Q6UWS5 81 aa14.41□□□□□ -0.1
NUP54-205ENST00000507257 FAM169BQ8N8A8 192 aa14.41□□□□□ -0.1
NUP54-205ENST00000507257 PRSS22Q9GZN4 317 aa14.41□□□□□ -0.1
NUP54-205ENST00000507257 GFRA4Q9GZZ7 299 aa14.41□□□□□ -0.1
NUP54-205ENST00000507257 ZNF492Q9P255 531 aa14.41□□□□□ -0.1
NUP54-205ENST00000507257 IGHV1-24A0A0C4DH33 117 aa14.4□□□□□ -0.1
NUP54-205ENST00000507257 FAM231BA6NCW3 169 aa14.4□□□□□ -0.1
NUP54-205ENST00000507257 VWC2LB2RUY7 222 aa14.4□□□□□ -0.1
NUP54-205ENST00000507257 FSTL3O95633 263 aa14.4□□□□□ -0.1
NUP54-205ENST00000507257 IGHV3-13P01766 116 aa14.4□□□□□ -0.1
NUP54-205ENST00000507257 IGHV3-7P01780 117 aa14.4□□□□□ -0.1
NUP54-205ENST00000507257 MORN5Q5VZ52 161 aa14.4□□□□□ -0.1
NUP54-205ENST00000507257 TDHQ8IZJ6 230 aa14.4□□□□□ -0.1
NUP54-205ENST00000507257 STXBP6Q8NFX7 210 aa14.4□□□□□ -0.1
NUP54-205ENST00000507257 FXYD5Q96DB9 178 aa14.4□□□□□ -0.1
NUP54-205ENST00000507257 MLST8Q9BVC4 326 aa14.4□□□□□ -0.1
NUP54-205ENST00000507257 TANC2Q9HCD6 1990 aa14.4□□□□□ -0.1
NUP54-205ENST00000507257 FAM186AA6NE01 2351 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 TRAV5A0A0B4J249 113 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 A8MWL6 223 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 CD5LO43866 347 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 COX7A2P2O60397 106 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 AGFG2O95081 481 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 LEPROTL1O95214 131 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 GPR6P46095 362 aaPredicted RBP14.39□□□□□ -0.11
NUP54-205ENST00000507257 RNFT1Q5M7Z0 435 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 C10orf113Q5VZT2 155 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 SSX8Q7RTT4 187 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 SMIM15Q7Z3B0 74 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 THAP8Q8NA92 274 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 ZNRF1Q8ND25 227 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 OR2Z1Q8NG97 314 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 OR2T6Q8NHC8 308 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 NDFIP1Q9BT67 221 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 CST9LQ9H4G1 147 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 NDUFA4L2Q9NRX3 87 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 CLEC5AQ9NY25 188 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 HSBP1L1C9JCN9 74 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 LIPFP07098 398 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 CAMPP49913 170 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 ERHP84090 104 aaKnown RBP14.39□□□□□ -0.11
NUP54-205ENST00000507257 UTF1Q5T230 341 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 MAFAQ8NHW3 353 aaPredicted RBP14.39□□□□□ -0.11
NUP54-205ENST00000507257 OSR1Q8TAX0 266 aaPredicted RBP14.39□□□□□ -0.11
NUP54-205ENST00000507257 FAM222BQ8WU58 562 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 FER1L6-AS2Q96M78 137 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 GPR82Q96P67 336 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 SSBP4Q9BWG4 385 aaPredicted RBP14.39□□□□□ -0.11
NUP54-205ENST00000507257 RPP21Q9H633 154 aaKnown RBP14.39□□□□□ -0.11
NUP54-205ENST00000507257 ZNF430Q9H8G1 570 aaPredicted RBP14.39□□□□□ -0.11
NUP54-205ENST00000507257 SCRT2Q9NQ03 307 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 FZR1Q9UM11 496 aa14.39□□□□□ -0.11
NUP54-205ENST00000507257 SRRM4A7MD48 611 aaKnown RBP14.38□□□□□ -0.11
NUP54-205ENST00000507257 CT45A6P0DMU7 189 aa14.38□□□□□ -0.11
NUP54-205ENST00000507257 CT45A5P0DMU8 189 aa14.38□□□□□ -0.11
NUP54-205ENST00000507257 CT45A7P0DMV0 189 aa14.38□□□□□ -0.11
NUP54-205ENST00000507257 OCIAD2Q56VL3 154 aa14.38□□□□□ -0.11
NUP54-205ENST00000507257 SLC25A48Q6ZT89 311 aaKnown RBP14.38□□□□□ -0.11
NUP54-205ENST00000507257 TMEM105Q8N8V8 129 aa14.38□□□□□ -0.11
NUP54-205ENST00000507257 EPDR1Q9UM22 224 aa14.38□□□□□ -0.11
NUP54-205ENST00000507257 TCRBV4S1A1TA0A5B7 111 aa14.37□□□□□ -0.11
NUP54-205ENST00000507257 NUDT3O95989 172 aa14.37□□□□□ -0.11
NUP54-205ENST00000507257 SP9P0CG40 484 aa14.37□□□□□ -0.11
NUP54-205ENST00000507257 MLANAQ16655 118 aa14.37□□□□□ -0.11
NUP54-205ENST00000507257 ZNF841Q6ZN19 808 aa14.37□□□□□ -0.11
NUP54-205ENST00000507257 TMEM178AQ8NBL3 297 aa14.37□□□□□ -0.11
NUP54-205ENST00000507257 LEAP2Q969E1 77 aa14.37□□□□□ -0.11
NUP54-205ENST00000507257 PMCHL2Q9BQD1 86 aa14.37□□□□□ -0.11
NUP54-205ENST00000507257 WASHC3Q9Y3C0 194 aa14.37□□□□□ -0.11
NUP54-205ENST00000507257 IGHV3OR15-7A0A075B7D8 119 aa14.37□□□□□ -0.11
NUP54-205ENST00000507257 C19orf71A6NCJ1 209 aa14.37□□□□□ -0.11
NUP54-205ENST00000507257 TM4SF5O14894 197 aa14.37□□□□□ -0.11
NUP54-205ENST00000507257 PYYP10082 97 aa14.37□□□□□ -0.11
NUP54-205ENST00000507257 HIST1H1AQ02539 215 aaPredicted RBP14.37□□□□□ -0.11
NUP54-205ENST00000507257 PATE2Q6UY27 113 aa14.37□□□□□ -0.11
NUP54-205ENST00000507257 DKK4Q9UBT3 224 aa14.37□□□□□ -0.11
NUP54-205ENST00000507257 MED13Q9UHV7 2174 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms