RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 TXN2Q99757 166 aa13.82□□□□□ -0.2
PDLIM7-216ENST00000506537 FAM240BA0A1B0GVZ2 78 aa13.81□□□□□ -0.2
PDLIM7-216ENST00000506537 IZUMO1RA6ND01 250 aa13.81□□□□□ -0.2
PDLIM7-216ENST00000506537 GP9P14770 177 aa13.81□□□□□ -0.2
PDLIM7-216ENST00000506537 NPY1RP25929 384 aa13.81□□□□□ -0.2
PDLIM7-216ENST00000506537 OPRK1P41145 380 aa13.81□□□□□ -0.2
PDLIM7-216ENST00000506537 MZT2BQ6NZ67 158 aa13.81□□□□□ -0.2
PDLIM7-216ENST00000506537 MITD1Q8WV92 249 aa13.81□□□□□ -0.2
PDLIM7-216ENST00000506537 HIPK2Q9H2X6 1198 aa13.81□□□□□ -0.2
PDLIM7-216ENST00000506537 LSM4Q9Y4Z0 139 aaKnown RBP13.81□□□□□ -0.2
PDLIM7-216ENST00000506537 IGHV3OR16-8A0A075B7F1 116 aa13.8□□□□□ -0.2
PDLIM7-216ENST00000506537 FAM90A26D6RGX4 464 aa13.8□□□□□ -0.2
PDLIM7-216ENST00000506537 NDUFA4O00483 81 aa13.8□□□□□ -0.2
PDLIM7-216ENST00000506537 H2AFB2P0C5Z0 115 aa13.8□□□□□ -0.2
PDLIM7-216ENST00000506537 CBLN1P23435 193 aa13.8□□□□□ -0.2
PDLIM7-216ENST00000506537 DUSP18Q8NEJ0 188 aa13.8□□□□□ -0.2
PDLIM7-216ENST00000506537 SEC22CQ9BRL7 303 aa13.8□□□□□ -0.2
PDLIM7-216ENST00000506537 GAR1Q9NY12 217 aaKnown RBP13.8□□□□□ -0.2
PDLIM7-216ENST00000506537 SELENOKQ9Y6D0 94 aa13.8□□□□□ -0.2
PDLIM7-216ENST00000506537 NUPL2O15504 423 aaKnown RBP13.79□□□□□ -0.2
PDLIM7-216ENST00000506537 GNG7O60262 68 aa13.79□□□□□ -0.2
PDLIM7-216ENST00000506537 IAPPP10997 89 aa13.79□□□□□ -0.2
PDLIM7-216ENST00000506537 DEFB114Q30KQ6 69 aa13.79□□□□□ -0.2
PDLIM7-216ENST00000506537 CD300EQ496F6 205 aaPredicted RBP13.79□□□□□ -0.2
PDLIM7-216ENST00000506537 DEFB121Q5J5C9 76 aa13.79□□□□□ -0.2
PDLIM7-216ENST00000506537 RNASEH2CQ8TDP1 164 aaKnown RBP13.79□□□□□ -0.2
PDLIM7-216ENST00000506537 MLXQ9UH92 298 aa13.79□□□□□ -0.2
PDLIM7-216ENST00000506537 COL7A1Q02388 2944 aa13.79□□□□□ -0.2
PDLIM7-216ENST00000506537 IFNA10P01566 189 aa13.78□□□□□ -0.2
PDLIM7-216ENST00000506537 C8orf88P0DMB2 117 aa13.78□□□□□ -0.2
PDLIM7-216ENST00000506537 NPBWR1P48145 328 aa13.78□□□□□ -0.2
PDLIM7-216ENST00000506537 ELLP55199 621 aaPredicted RBP13.78□□□□□ -0.2
PDLIM7-216ENST00000506537 UXS1Q8NBZ7 420 aa13.78□□□□□ -0.2
PDLIM7-216ENST00000506537 OR2K2Q8NGT1 345 aa13.78□□□□□ -0.2
PDLIM7-216ENST00000506537 OR4X1Q8NH49 305 aa13.78□□□□□ -0.2
PDLIM7-216ENST00000506537 DYNLRB2Q8TF09 96 aa13.78□□□□□ -0.2
PDLIM7-216ENST00000506537 MAGT1Q9H0U3 335 aa13.78□□□□□ -0.2
PDLIM7-216ENST00000506537 PALMDQ9NP74 551 aa13.78□□□□□ -0.2
PDLIM7-216ENST00000506537 UFC1Q9Y3C8 167 aa13.78□□□□□ -0.2
PDLIM7-216ENST00000506537 U3KQ87 197 aa13.78□□□□□ -0.2
PDLIM7-216ENST00000506537 CLN5O75503 358 aa13.77□□□□□ -0.21
PDLIM7-216ENST00000506537 TMEM50AO95807 157 aa13.77□□□□□ -0.21
PDLIM7-216ENST00000506537 RELQ04864 619 aaPredicted RBP13.77□□□□□ -0.21
PDLIM7-216ENST00000506537 LCN12Q6JVE5 192 aa13.77□□□□□ -0.21
PDLIM7-216ENST00000506537 PRSS54Q6PEW0 395 aa13.77□□□□□ -0.21
PDLIM7-216ENST00000506537 OR4D5Q8NGN0 318 aa13.77□□□□□ -0.21
PDLIM7-216ENST00000506537 ENKURQ8TC29 256 aa13.77□□□□□ -0.21
PDLIM7-216ENST00000506537 ZNF431Q8TF32 576 aaPredicted RBP13.77□□□□□ -0.21
PDLIM7-216ENST00000506537 OR10C1Q96KK4 312 aa13.77□□□□□ -0.21
PDLIM7-216ENST00000506537 C20orf24Q9BUV8 137 aa13.77□□□□□ -0.21
PDLIM7-216ENST00000506537 DAZ1Q9NQZ3 744 aaKnown RBP13.77□□□□□ -0.21
PDLIM7-216ENST00000506537 RPS10-NUDT3A0A1W2PQS6 291 aa13.76□□□□□ -0.21
PDLIM7-216ENST00000506537 C15orf62A8K5M9 175 aa13.76□□□□□ -0.21
PDLIM7-216ENST00000506537 ZNF207O43670 478 aaKnown RBP13.76□□□□□ -0.21
PDLIM7-216ENST00000506537 SYNGR2O43760 224 aa13.76□□□□□ -0.21
PDLIM7-216ENST00000506537 IFNA21P01568 189 aa13.76□□□□□ -0.21
PDLIM7-216ENST00000506537 BTNL8Q6UX41 500 aa13.76□□□□□ -0.21
PDLIM7-216ENST00000506537 NRARPQ7Z6K4 114 aa13.76□□□□□ -0.21
PDLIM7-216ENST00000506537 MARC2Q969Z3 335 aa13.76□□□□□ -0.21
PDLIM7-216ENST00000506537 TECRQ9NZ01 308 aaKnown RBP13.76□□□□□ -0.21
PDLIM7-216ENST00000506537 ZNF785A8K8V0 405 aa13.75□□□□□ -0.21
PDLIM7-216ENST00000506537 CCSO14618 274 aa13.75□□□□□ -0.21
PDLIM7-216ENST00000506537 MED6O75586 246 aa13.75□□□□□ -0.21
PDLIM7-216ENST00000506537 IGKV1-17P01599 117 aa13.75□□□□□ -0.21
PDLIM7-216ENST00000506537 RND2P52198 227 aa13.75□□□□□ -0.21
PDLIM7-216ENST00000506537 POLR2GP62487 172 aaKnown RBP eCLIP13.75□□□□□ -0.21
PDLIM7-216ENST00000506537 ID3Q02535 119 aa13.75□□□□□ -0.21
PDLIM7-216ENST00000506537 NOXA1Q86UR1 476 aa13.75□□□□□ -0.21
PDLIM7-216ENST00000506537 Q8N1Y9 231 aa13.75□□□□□ -0.21
PDLIM7-216ENST00000506537 WDR89Q96FK6 387 aaPredicted RBP13.75□□□□□ -0.21
PDLIM7-216ENST00000506537 ZFAND3Q9H8U3 227 aa13.75□□□□□ -0.21
PDLIM7-216ENST00000506537 MRPL27Q9P0M9 148 aaKnown RBP13.75□□□□□ -0.21
PDLIM7-216ENST00000506537 K7EMT4 169 aa13.74□□□□□ -0.21
PDLIM7-216ENST00000506537 WRBO00258 174 aa13.74□□□□□ -0.21
PDLIM7-216ENST00000506537 YIF1AO95070 293 aa13.74□□□□□ -0.21
PDLIM7-216ENST00000506537 SLC25A4P12235 298 aa13.74□□□□□ -0.21
PDLIM7-216ENST00000506537 CD69Q07108 199 aa13.74□□□□□ -0.21
PDLIM7-216ENST00000506537 IAH1Q2TAA2 248 aaPredicted RBP13.74□□□□□ -0.21
PDLIM7-216ENST00000506537 TIGITQ495A1 244 aa13.74□□□□□ -0.21
PDLIM7-216ENST00000506537 TOMM20LQ6UXN7 152 aa13.74□□□□□ -0.21
PDLIM7-216ENST00000506537 ZNF600Q6ZNG1 722 aa13.74□□□□□ -0.21
PDLIM7-216ENST00000506537 SLC16A13Q7RTY0 426 aa13.74□□□□□ -0.21
PDLIM7-216ENST00000506537 TMEM61Q8N0U2 210 aa13.74□□□□□ -0.21
PDLIM7-216ENST00000506537 ZBTB8BQ8NAP8 495 aaPredicted RBP13.74□□□□□ -0.21
PDLIM7-216ENST00000506537 TMEM116Q8NCL8 245 aa13.74□□□□□ -0.21
PDLIM7-216ENST00000506537 IFNA4P05014 189 aa13.73□□□□□ -0.21
PDLIM7-216ENST00000506537 IL5P05113 134 aa13.73□□□□□ -0.21
PDLIM7-216ENST00000506537 IGLC1P0CG04 106 aa13.73□□□□□ -0.21
PDLIM7-216ENST00000506537 NKX2-1P43699 371 aaPredicted RBP13.73□□□□□ -0.21
PDLIM7-216ENST00000506537 ATP5IP56385 69 aaPredicted RBP13.73□□□□□ -0.21
PDLIM7-216ENST00000506537 DCTN2Q13561 401 aaKnown RBP13.73□□□□□ -0.21
PDLIM7-216ENST00000506537 C12orf45Q8N5I9 185 aaPredicted RBP13.73□□□□□ -0.21
PDLIM7-216ENST00000506537 CIB3Q96Q77 187 aaPredicted RBP13.73□□□□□ -0.21
PDLIM7-216ENST00000506537 PUS1Q9Y606 427 aaKnown RBP eCLIP13.73□□□□□ -0.21
PDLIM7-216ENST00000506537 SMAD5-AS1Q9Y6J3 95 aa13.73□□□□□ -0.21
PDLIM7-216ENST00000506537 H3BP45 60 aa13.72□□□□□ -0.21
PDLIM7-216ENST00000506537 ETFRF1Q6IPR1 90 aa13.72□□□□□ -0.21
PDLIM7-216ENST00000506537 NPIPB3Q92617 1050 aa13.72□□□□□ -0.21
PDLIM7-216ENST00000506537 ACY3Q96HD9 319 aa13.72□□□□□ -0.21
PDLIM7-216ENST00000506537 B9D2Q9BPU9 175 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms