RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 GRPP07492 148 aa13□□□□□ -0.33
SCLT1-208ENST00000506368 CELA3BP08861 270 aa13□□□□□ -0.33
SCLT1-208ENST00000506368 SPINK2P20155 84 aa13□□□□□ -0.33
SCLT1-208ENST00000506368 UFSP1Q6NVU6 142 aa13□□□□□ -0.33
SCLT1-208ENST00000506368 SPATA12Q7Z6I5 190 aa13□□□□□ -0.33
SCLT1-208ENST00000506368 FER1L6-AS1Q8NA97 138 aa13□□□□□ -0.33
SCLT1-208ENST00000506368 PPP1R35Q8TAP8 253 aa13□□□□□ -0.33
SCLT1-208ENST00000506368 URB1-AS1Q96HZ7 61 aa13□□□□□ -0.33
SCLT1-208ENST00000506368 AP1S3Q96PC3 154 aa13□□□□□ -0.33
SCLT1-208ENST00000506368 NDFIP1Q9BT67 221 aa13□□□□□ -0.33
SCLT1-208ENST00000506368 CXXC4Q9H2H0 198 aa13□□□□□ -0.33
SCLT1-208ENST00000506368 ZFHX4Q86UP3 3567 aa12.99□□□□□ -0.33
SCLT1-208ENST00000506368 A0A1W2PNU3 283 aaPredicted RBP12.99□□□□□ -0.33
SCLT1-208ENST00000506368 G3V4G9 280 aa12.99□□□□□ -0.33
SCLT1-208ENST00000506368 SMIM17P0DL12 118 aa12.99□□□□□ -0.33
SCLT1-208ENST00000506368 COX8AP10176 69 aa12.99□□□□□ -0.33
SCLT1-208ENST00000506368 MDP1Q86V88 176 aa12.99□□□□□ -0.33
SCLT1-208ENST00000506368 H1FXQ92522 213 aaKnown RBP12.99□□□□□ -0.33
SCLT1-208ENST00000506368 FAM168AQ92567 244 aa12.99□□□□□ -0.33
SCLT1-208ENST00000506368 ZNF714Q96N38 554 aa12.99□□□□□ -0.33
SCLT1-208ENST00000506368 FAM173AQ9BQD7 235 aa12.99□□□□□ -0.33
SCLT1-208ENST00000506368 GNG12Q9UBI6 72 aa12.99□□□□□ -0.33
SCLT1-208ENST00000506368 C7orf71A4D174 169 aa12.98□□□□□ -0.33
SCLT1-208ENST00000506368 A6NDN8 102 aa12.98□□□□□ -0.33
SCLT1-208ENST00000506368 H3BRM9 83 aa12.98□□□□□ -0.33
SCLT1-208ENST00000506368 PEX7O00628 323 aa12.98□□□□□ -0.33
SCLT1-208ENST00000506368 CA1P00915 261 aaPredicted RBP12.98□□□□□ -0.33
SCLT1-208ENST00000506368 CEBPDP49716 269 aaPredicted RBP12.98□□□□□ -0.33
SCLT1-208ENST00000506368 UBE2L3P68036 154 aaKnown RBP12.98□□□□□ -0.33
SCLT1-208ENST00000506368 C2orf83Q53S99 150 aa12.98□□□□□ -0.33
SCLT1-208ENST00000506368 BPIFA4PQ86YQ2 179 aa12.98□□□□□ -0.33
SCLT1-208ENST00000506368 CACNG8Q8WXS5 425 aa12.98□□□□□ -0.33
SCLT1-208ENST00000506368 CLEC5AQ9NY25 188 aa12.98□□□□□ -0.33
SCLT1-208ENST00000506368 USF3Q68DE3 2245 aa12.98□□□□□ -0.33
SCLT1-208ENST00000506368 IGHV3-43A0A0B4J1X8 118 aa12.98□□□□□ -0.33
SCLT1-208ENST00000506368 A8MWL6 223 aa12.98□□□□□ -0.33
SCLT1-208ENST00000506368 IGHV3-43DP0DP04 118 aa12.98□□□□□ -0.33
SCLT1-208ENST00000506368 SCGB1A1P11684 91 aa12.98□□□□□ -0.33
SCLT1-208ENST00000506368 KIR3DL3Q8N743 410 aa12.98□□□□□ -0.33
SCLT1-208ENST00000506368 OR1L4Q8NGR5 311 aa12.98□□□□□ -0.33
SCLT1-208ENST00000506368 SSBP3Q9BWW4 388 aaPredicted RBP12.98□□□□□ -0.33
SCLT1-208ENST00000506368 ZNF835Q9Y2P0 537 aa12.98□□□□□ -0.33
SCLT1-208ENST00000506368 LAMA5O15230 3695 aa12.98□□□□□ -0.33
SCLT1-208ENST00000506368 CFAP47Q6ZTR5 3102 aa12.98□□□□□ -0.33
SCLT1-208ENST00000506368 TRAV3A0A0B4J244 114 aa12.97□□□□□ -0.33
SCLT1-208ENST00000506368 TRAV8-6A0A0B4J262 113 aa12.97□□□□□ -0.33
SCLT1-208ENST00000506368 hDV102S1A0JD36 115 aa12.97□□□□□ -0.33
SCLT1-208ENST00000506368 F2RL2O00254 374 aa12.97□□□□□ -0.33
SCLT1-208ENST00000506368 ZNHIT1O43257 154 aa12.97□□□□□ -0.33
SCLT1-208ENST00000506368 CCL4P13236 92 aa12.97□□□□□ -0.33
SCLT1-208ENST00000506368 LINC00205P59089 165 aa12.97□□□□□ -0.33
SCLT1-208ENST00000506368 PRCDQ00LT1 54 aa12.97□□□□□ -0.33
SCLT1-208ENST00000506368 MZT1Q08AG7 82 aa12.97□□□□□ -0.33
SCLT1-208ENST00000506368 FOXC1Q12948 553 aa12.97□□□□□ -0.33
SCLT1-208ENST00000506368 LINC01545Q5VT33 79 aa12.97□□□□□ -0.33
SCLT1-208ENST00000506368 FAM53AQ6NSI3 398 aaPredicted RBP12.97□□□□□ -0.33
SCLT1-208ENST00000506368 SSX8Q7RTT4 187 aa12.97□□□□□ -0.33
SCLT1-208ENST00000506368 OR1L8Q8NGR8 309 aa12.97□□□□□ -0.33
SCLT1-208ENST00000506368 C7orf69Q9H7B7 122 aa12.97□□□□□ -0.33
SCLT1-208ENST00000506368 OR51B2Q9Y5P1 312 aa12.97□□□□□ -0.33
SCLT1-208ENST00000506368 STXBP6Q8NFX7 210 aa12.97□□□□□ -0.33
SCLT1-208ENST00000506368 OR5A1Q8NGJ0 315 aa12.97□□□□□ -0.33
SCLT1-208ENST00000506368 SVIPQ8NHG7 77 aa12.97□□□□□ -0.33
SCLT1-208ENST00000506368 TMEM190Q8WZ59 177 aa12.97□□□□□ -0.33
SCLT1-208ENST00000506368 ST6GALNAC6Q969X2 333 aa12.97□□□□□ -0.33
SCLT1-208ENST00000506368 ZNF492Q9P255 531 aa12.97□□□□□ -0.33
SCLT1-208ENST00000506368 RPH3ALQ9UNE2 315 aa12.97□□□□□ -0.33
SCLT1-208ENST00000506368 C9orf118A6NHY6 69 aa12.96□□□□□ -0.33
SCLT1-208ENST00000506368 DEFB108AA8MXU0 73 aa12.96□□□□□ -0.33
SCLT1-208ENST00000506368 CAMPP49913 170 aa12.96□□□□□ -0.33
SCLT1-208ENST00000506368 SRYQ05066 204 aa12.96□□□□□ -0.33
SCLT1-208ENST00000506368 TMEM97Q5BJF2 176 aa12.96□□□□□ -0.33
SCLT1-208ENST00000506368 Q6ZR03 302 aa12.96□□□□□ -0.33
SCLT1-208ENST00000506368 C11orf53Q8IXP5 236 aa12.96□□□□□ -0.33
SCLT1-208ENST00000506368 FAM167A-AS1Q96KT0 104 aa12.96□□□□□ -0.33
SCLT1-208ENST00000506368 IFI27L2Q9H2X8 130 aa12.96□□□□□ -0.33
SCLT1-208ENST00000506368 ZNF430Q9H8G1 570 aaPredicted RBP12.96□□□□□ -0.33
SCLT1-208ENST00000506368 OBP2BQ9NPH6 170 aa12.96□□□□□ -0.33
SCLT1-208ENST00000506368 PINLYPA6NC86 204 aa12.95□□□□□ -0.34
SCLT1-208ENST00000506368 AHRRA9YTQ3 701 aa12.95□□□□□ -0.34
SCLT1-208ENST00000506368 C9orf172C9J069 976 aa12.95□□□□□ -0.34
SCLT1-208ENST00000506368 HTR1DP28221 377 aa12.95□□□□□ -0.34
SCLT1-208ENST00000506368 ZNF329Q86UD4 541 aa12.95□□□□□ -0.34
SCLT1-208ENST00000506368 VKORC1L1Q8N0U8 176 aa12.95□□□□□ -0.34
SCLT1-208ENST00000506368 OR1N2Q8NGR9 330 aa12.95□□□□□ -0.34
SCLT1-208ENST00000506368 SLC25A2Q9BXI2 301 aa12.95□□□□□ -0.34
SCLT1-208ENST00000506368 RPP21Q9H633 154 aaKnown RBP12.95□□□□□ -0.34
SCLT1-208ENST00000506368 LOXL2Q9Y4K0 774 aa12.95□□□□□ -0.34
SCLT1-208ENST00000506368 MED12LQ86YW9 2145 aa12.95□□□□□ -0.34
SCLT1-208ENST00000506368 PSMB11A5LHX3 300 aa12.95□□□□□ -0.34
SCLT1-208ENST00000506368 SIVA1O15304 175 aa12.95□□□□□ -0.34
SCLT1-208ENST00000506368 GPR6P46095 362 aaPredicted RBP12.95□□□□□ -0.34
SCLT1-208ENST00000506368 WDR82Q6UXN9 313 aa12.95□□□□□ -0.34
SCLT1-208ENST00000506368 TMEM251Q8N6I4 163 aa12.95□□□□□ -0.34
SCLT1-208ENST00000506368 RFESDQ8TAC1 157 aa12.95□□□□□ -0.34
SCLT1-208ENST00000506368 KLF12Q9Y4X4 402 aa12.95□□□□□ -0.34
SCLT1-208ENST00000506368 HCFC1P51610 2035 aa12.95□□□□□ -0.34
SCLT1-208ENST00000506368 DMXL2Q8TDJ6 3036 aa12.94□□□□□ -0.34
SCLT1-208ENST00000506368 K7EP34 96 aa12.94□□□□□ -0.34
SCLT1-208ENST00000506368 GATA2P23769 480 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms