RNA–Protein interactions for RNA: ENST00000503627.2

GYPA-203, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 318 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-203ENST00000503627 MED31Q9Y3C7 131 aa3.11□□□□□ -1.91
GYPA-203ENST00000503627 FAM215AQ9Y5M1 114 aa3.11□□□□□ -1.91
GYPA-203ENST00000503627 LCTP09848 1927 aa3.11□□□□□ -1.91
GYPA-203ENST00000503627 BCL9O00512 1426 aa3.1□□□□□ -1.91
GYPA-203ENST00000503627 CACNA1SQ13698 1873 aa3.1□□□□□ -1.91
GYPA-203ENST00000503627 IGLV4-60A0A075B6I1 120 aa3.1□□□□□ -1.91
GYPA-203ENST00000503627 TRAV36DV7A0A075B6V5 113 aa3.1□□□□□ -1.91
GYPA-203ENST00000503627 TRDV1A0A1B0GX56 115 aa3.1□□□□□ -1.91
GYPA-203ENST00000503627 TLCD2A6NGC4 264 aa3.1□□□□□ -1.91
GYPA-203ENST00000503627 H3BT86 120 aa3.1□□□□□ -1.91
GYPA-203ENST00000503627 C19orf84I3L1E1 186 aa3.1□□□□□ -1.91
GYPA-203ENST00000503627 BCL2P10415 239 aa3.1□□□□□ -1.91
GYPA-203ENST00000503627 RPL28P46779 137 aaKnown RBP3.1□□□□□ -1.91
GYPA-203ENST00000503627 RTL8BQ17RB0 113 aa3.1□□□□□ -1.91
GYPA-203ENST00000503627 AGTRAPQ6RW13 159 aa3.1□□□□□ -1.91
GYPA-203ENST00000503627 OR8J3Q8NGG0 315 aa3.1□□□□□ -1.91
GYPA-203ENST00000503627 OR51T1Q8NGJ9 327 aa3.1□□□□□ -1.91
GYPA-203ENST00000503627 TMEM126AQ9H061 195 aa3.1□□□□□ -1.91
GYPA-203ENST00000503627 DUSP21Q9H596 190 aa3.1□□□□□ -1.91
GYPA-203ENST00000503627 OTORQ9NRC9 128 aa3.1□□□□□ -1.91
GYPA-203ENST00000503627 TXNL4BQ9NX01 149 aaKnown RBP3.1□□□□□ -1.91
GYPA-203ENST00000503627 SPANXCQ9NY87 97 aa3.1□□□□□ -1.91
GYPA-203ENST00000503627 NAT8Q9UHE5 227 aa3.1□□□□□ -1.91
GYPA-203ENST00000503627 TRAPPC2LQ9UL33 140 aa3.1□□□□□ -1.91
GYPA-203ENST00000503627 LAMTOR2Q9Y2Q5 125 aa3.1□□□□□ -1.91
GYPA-203ENST00000503627 MINOS1-NBL1R4GNA1 71 aa3.1□□□□□ -1.91
GYPA-203ENST00000503627 A0A087X0T9 212 aa3.09□□□□□ -1.91
GYPA-203ENST00000503627 TMEM235A6NFC5 223 aa3.09□□□□□ -1.91
GYPA-203ENST00000503627 TMEM212A6NML5 194 aa3.09□□□□□ -1.91
GYPA-203ENST00000503627 OR2T1O43869 369 aa3.09□□□□□ -1.91
GYPA-203ENST00000503627 CPSF4O95639 269 aaKnown RBP3.09□□□□□ -1.91
GYPA-203ENST00000503627 S100A11P31949 105 aa3.09□□□□□ -1.91
GYPA-203ENST00000503627 RNASE4P34096 147 aaKnown RBP3.09□□□□□ -1.91
GYPA-203ENST00000503627 PSG9Q00887 426 aa3.09□□□□□ -1.91
GYPA-203ENST00000503627 C1orf140Q5VVS0 124 aa3.09□□□□□ -1.91
GYPA-203ENST00000503627 AMMECR1LQ6DCA0 310 aa3.09□□□□□ -1.91
GYPA-203ENST00000503627 MIR17HGQ75NE6 70 aa3.09□□□□□ -1.91
GYPA-203ENST00000503627 TRAPPC6BQ86SZ2 158 aa3.09□□□□□ -1.91
GYPA-203ENST00000503627 KRTAP11-1Q8IUC1 163 aa3.09□□□□□ -1.91
GYPA-203ENST00000503627 PRR15Q8IV56 129 aa3.09□□□□□ -1.91
GYPA-203ENST00000503627 Q8NDZ9 215 aa3.09□□□□□ -1.91
GYPA-203ENST00000503627 CANT1Q8WVQ1 401 aa3.09□□□□□ -1.91
GYPA-203ENST00000503627 ISOC1Q96CN7 298 aa3.09□□□□□ -1.91
GYPA-203ENST00000503627 ZC2HC1AQ96GY0 325 aa3.09□□□□□ -1.91
GYPA-203ENST00000503627 OSTCQ9NRP0 149 aa3.09□□□□□ -1.91
GYPA-203ENST00000503627 SLIT3O75094 1523 aa3.09□□□□□ -1.92
GYPA-203ENST00000503627 BORCS7-ASMTA0A0B4J1R7 106 aa3.08□□□□□ -1.92
GYPA-203ENST00000503627 TMEM189A5PLL7 270 aa3.08□□□□□ -1.92
GYPA-203ENST00000503627 TMEM256-PLSCR3K7ERE1 68 aa3.08□□□□□ -1.92
GYPA-203ENST00000503627 TP53I11O14683 189 aa3.08□□□□□ -1.92
GYPA-203ENST00000503627 OVOL1O14753 267 aa3.08□□□□□ -1.92
GYPA-203ENST00000503627 BPGMP07738 259 aa3.08□□□□□ -1.92
GYPA-203ENST00000503627 ZNF14P17017 642 aaPredicted RBP3.08□□□□□ -1.92
GYPA-203ENST00000503627 SRP14P37108 136 aaKnown RBP3.08□□□□□ -1.92
GYPA-203ENST00000503627 EIF5AP63241 154 aaKnown RBP3.08□□□□□ -1.92
GYPA-203ENST00000503627 DNLZQ5SXM8 178 aa3.08□□□□□ -1.92
GYPA-203ENST00000503627 HMGN2P46Q86SG4 172 aa3.08□□□□□ -1.92
GYPA-203ENST00000503627 MSRB3Q8IXL7 192 aa3.08□□□□□ -1.92
GYPA-203ENST00000503627 DYNAPQ8N1N2 210 aa3.08□□□□□ -1.92
GYPA-203ENST00000503627 HIST3H2BBQ8N257 126 aa3.08□□□□□ -1.92
GYPA-203ENST00000503627 LRRC18Q8N456 261 aa3.08□□□□□ -1.92
GYPA-203ENST00000503627 C10orf126Q8N4M7 172 aa3.08□□□□□ -1.92
GYPA-203ENST00000503627 TMEM229BQ8NBD8 167 aa3.08□□□□□ -1.92
GYPA-203ENST00000503627 OR4C16Q8NGL9 310 aa3.08□□□□□ -1.92
GYPA-203ENST00000503627 PFN4Q8NHR9 129 aa3.08□□□□□ -1.92
GYPA-203ENST00000503627 BORCS8Q96FH0 119 aa3.08□□□□□ -1.92
GYPA-203ENST00000503627 SHANK3Q9BYB0 1731 aa3.07□□□□□ -1.92
GYPA-203ENST00000503627 ARRDC5A6NEK1 342 aa3.07□□□□□ -1.92
GYPA-203ENST00000503627 C11orf86A6NJI1 115 aa3.07□□□□□ -1.92
GYPA-203ENST00000503627 GNRH2O43555 120 aa3.07□□□□□ -1.92
GYPA-203ENST00000503627 CREBL2O60519 120 aaPredicted RBP3.07□□□□□ -1.92
GYPA-203ENST00000503627 MSMBP08118 114 aa3.07□□□□□ -1.92
GYPA-203ENST00000503627 KRTAP10-12P60413 245 aa3.07□□□□□ -1.92
GYPA-203ENST00000503627 SUPT4H1P63272 117 aaKnown RBP3.07□□□□□ -1.92
GYPA-203ENST00000503627 PLCXD2Q0VAA5 305 aa3.07□□□□□ -1.92
GYPA-203ENST00000503627 BCL2L15Q5TBC7 163 aa3.07□□□□□ -1.92
GYPA-203ENST00000503627 SCGB3A1Q96QR1 104 aa3.07□□□□□ -1.92
GYPA-203ENST00000503627 TSC22D3Q99576 134 aa3.07□□□□□ -1.92
GYPA-203ENST00000503627 SLC25A21Q9BQT8 299 aaPredicted RBP3.07□□□□□ -1.92
GYPA-203ENST00000503627 ZNF471Q9BX82 626 aaPredicted RBP3.07□□□□□ -1.92
GYPA-203ENST00000503627 YIPF3Q9GZM5 350 aa3.07□□□□□ -1.92
GYPA-203ENST00000503627 MYH11P35749 1972 aa3.07□□□□□ -1.92
GYPA-203ENST00000503627 TRGV5A0A0B4J1U4 118 aa3.06□□□□□ -1.92
GYPA-203ENST00000503627 GABARAPH6UMI1 98 aa3.06□□□□□ -1.92
GYPA-203ENST00000503627 UCHL1P09936 223 aa3.06□□□□□ -1.92
GYPA-203ENST00000503627 SLC38A11Q08AI6 406 aa3.06□□□□□ -1.92
GYPA-203ENST00000503627 EIF3IQ13347 325 aaKnown RBP3.06□□□□□ -1.92
GYPA-203ENST00000503627 PRR14LQ5THK1 2151 aa3.06□□□□□ -1.92
GYPA-203ENST00000503627 DENND4CQ5VZ89 1909 aa3.06□□□□□ -1.92
GYPA-203ENST00000503627 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
GYPA-203ENST00000503627 CD109Q6YHK3 1445 aa3.06□□□□□ -1.92
GYPA-203ENST00000503627 SPATA31E1Q6ZUB1 1445 aa3.06□□□□□ -1.92
GYPA-203ENST00000503627 CROCCP2Q86T23 111 aa3.06□□□□□ -1.92
GYPA-203ENST00000503627 DOCK4Q8N1I0 1966 aa3.06□□□□□ -1.92
GYPA-203ENST00000503627 OR5A1Q8NGJ0 315 aa3.06□□□□□ -1.92
GYPA-203ENST00000503627 TOPBP1Q92547 1522 aa3.06□□□□□ -1.92
GYPA-203ENST00000503627 PFDN5Q99471 154 aa3.06□□□□□ -1.92
GYPA-203ENST00000503627 MRPL32Q9BYC8 188 aaKnown RBP3.06□□□□□ -1.92
GYPA-203ENST00000503627 NYNRINQ9P2P1 1898 aaKnown RBP3.06□□□□□ -1.92
GYPA-203ENST00000503627 HSPB8Q9UJY1 196 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms